Project name: query_structure

Status: done

Started: 2026-03-17 01:24:34
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDYYYITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAWYEKDQYWWEYSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:36)
Show buried residues

Minimal score value
-3.3374
Maximal score value
1.8455
Average score
-0.5563
Total score value
-52.2882

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.8455
2 S A 0.8321
3 S A 0.5776
4 V A 0.2379
5 P A 0.0000
6 T A -1.6429
7 K A -2.6198
8 L A 0.0000
9 E A -1.9182
10 V A 0.1009
11 V A 1.5431
12 A A 0.8983
13 A A 0.3170
14 T A -0.3408
15 P A -1.0904
16 T A -0.9846
17 S A -0.5350
18 L A 0.0000
19 L A 0.7515
20 I A 0.0000
21 S A -0.9688
22 W A 0.0000
23 D A -2.6153
24 A A -1.1924
25 P A 0.1188
26 A A 0.6110
27 V A 0.9458
28 T A -0.1600
29 V A -0.4568
30 D A -1.2365
31 Y A -0.0035
32 Y A 0.0000
33 Y A 0.6532
34 I A 0.0000
35 T A -0.4182
36 Y A -0.4148
37 G A 0.0000
38 E A -1.6708
39 T A -1.3388
40 G A -1.2779
41 G A -1.4690
42 N A -1.5603
43 S A -0.9225
44 P A -0.4136
45 V A 0.2600
46 Q A -1.1955
47 E A -1.6169
48 F A -0.4779
49 T A 0.2591
50 V A 0.0000
51 P A -0.5902
52 G A -0.6915
53 S A -1.1636
54 K A -2.0698
55 S A -1.3620
56 T A -0.7636
57 A A 0.0000
58 T A 0.2390
59 I A 0.0000
60 S A -0.6615
61 G A -1.0292
62 L A 0.0000
63 K A -2.3616
64 P A -1.6152
65 G A -1.3720
66 V A -1.4552
67 D A -2.2821
68 Y A 0.0000
69 T A -0.8406
70 I A 0.0000
71 T A -0.1946
72 V A 0.0000
73 Y A 0.7964
74 A A 0.0000
75 W A 0.2377
76 Y A -1.2109
77 E A -2.9416
78 K A -3.3374
79 D A -2.8922
80 Q A -1.7168
81 Y A 0.3384
82 W A 1.2389
83 W A 1.2962
84 E A 0.0177
85 Y A 0.9023
86 S A 0.2094
87 P A 0.2475
88 I A 0.2032
89 S A -0.5363
90 I A -0.7448
91 N A -1.8007
92 Y A -1.5625
93 R A -2.5912
94 T A -1.6384
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Laboratory of Theory of Biopolymers 2018