| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVKDGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTIGHPLFNKLGDTENPTAPVHEGEDVRVSFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPDGAPLPAAPPPSPLFTPPPPSSPLAVPPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPENNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9494 | |
| 2 | L | A | 1.9702 | |
| 3 | P | A | 0.6474 | |
| 4 | P | A | 0.3693 | |
| 5 | T | A | 0.1197 | |
| 6 | T | A | 0.1251 | |
| 7 | P | A | 0.1785 | |
| 8 | V | A | 1.2205 | |
| 9 | A | A | 0.0351 | |
| 10 | K | A | -1.1451 | |
| 11 | V | A | -0.3840 | |
| 12 | Q | A | -1.4985 | |
| 13 | S | A | -1.5900 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4136 | |
| 16 | E | A | -2.4325 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4611 | |
| 20 | P | A | 0.1058 | |
| 21 | T | A | 0.1124 | |
| 22 | S | A | -0.1750 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1263 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2779 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8737 | |
| 31 | R | A | -2.6467 | |
| 32 | L | A | -0.7814 | |
| 33 | L | A | 1.2212 | |
| 34 | T | A | 1.4731 | |
| 35 | V | A | 2.0309 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2182 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6850 | |
| 40 | E | A | -1.7388 | |
| 41 | D | A | -0.9327 | |
| 42 | I | A | 0.8587 | |
| 43 | V | A | 0.9182 | |
| 44 | K | A | -1.4126 | |
| 45 | D | A | -2.4388 | |
| 46 | G | A | -1.4716 | |
| 47 | K | A | -1.0810 | |
| 48 | V | A | 1.4272 | |
| 49 | V | A | 2.0171 | |
| 50 | V | A | 1.3137 | |
| 51 | P | A | 0.4525 | |
| 52 | K | A | -0.6486 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1413 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4941 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3118 | |
| 70 | K | A | -1.8248 | |
| 71 | F | A | -0.6759 | |
| 72 | A | A | -0.5712 | |
| 73 | L | A | -0.8510 | |
| 74 | P | A | -1.2523 | |
| 75 | Q | A | -2.4666 | |
| 76 | K | A | -3.0844 | |
| 77 | D | A | -2.9770 | |
| 78 | F | A | -1.6183 | |
| 79 | Y | A | -1.8894 | |
| 80 | D | A | -2.7249 | |
| 81 | P | A | -2.3371 | |
| 82 | E | A | -3.0544 | |
| 83 | K | A | -3.4290 | |
| 84 | E | A | -2.4878 | |
| 85 | R | A | -1.2975 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6632 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9727 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3199 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6721 | |
| 99 | G | A | -0.5352 | |
| 100 | P | A | -0.4199 | |
| 101 | L | A | -0.0042 | |
| 102 | G | A | -0.2950 | |
| 103 | K | A | -0.7739 | |
| 104 | G | A | -0.5495 | |
| 105 | T | A | -0.4823 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.0897 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3060 | |
| 110 | L | A | 0.3189 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0602 | |
| 113 | K | A | -0.5787 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4454 | |
| 117 | T | A | -1.3269 | |
| 118 | E | A | -2.7099 | |
| 119 | N | A | -2.4074 | |
| 120 | P | A | -1.5480 | |
| 121 | T | A | -0.8399 | |
| 122 | A | A | -0.3888 | |
| 123 | P | A | -0.4903 | |
| 124 | V | A | -0.5260 | |
| 125 | H | A | -1.9719 | |
| 126 | E | A | -3.1112 | |
| 127 | G | A | -2.7223 | |
| 128 | E | A | -3.5234 | |
| 129 | D | A | -2.9681 | |
| 130 | V | A | -1.7940 | |
| 131 | R | A | -1.0266 | |
| 132 | V | A | 0.2277 | |
| 133 | S | A | 0.1560 | |
| 134 | F | A | 0.1342 | |
| 135 | S | A | -0.1387 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7020 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5521 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2574 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1325 | |
| 157 | D | A | 0.2943 | |
| 158 | L | A | 0.7555 | |
| 159 | A | A | 0.1396 | |
| 160 | E | A | -1.4650 | |
| 161 | P | A | -0.2223 | |
| 162 | C | A | 0.1922 | |
| 163 | P | A | -0.1636 | |
| 164 | G | A | -0.0723 | |
| 165 | L | A | 0.5966 | |
| 166 | P | A | -0.1111 | |
| 167 | P | A | -0.3387 | |
| 168 | G | A | -0.4208 | |
| 169 | A | A | 0.0917 | |
| 170 | C | A | 0.7932 | |
| 171 | P | A | 0.5189 | |
| 172 | P | A | 0.7478 | |
| 173 | I | A | 1.9330 | |
| 174 | Q | A | 0.8167 | |
| 175 | L | A | 1.4936 | |
| 176 | V | A | 0.8431 | |
| 177 | N | A | -0.3664 | |
| 178 | S | A | -0.0174 | |
| 179 | V | A | 0.3495 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3604 | |
| 182 | D | A | 0.0711 | |
| 183 | G | A | -0.1562 | |
| 184 | D | A | -0.5634 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1699 | |
| 190 | F | A | 0.0610 | |
| 191 | G | A | -0.1070 | |
| 192 | N | A | -0.2831 | |
| 193 | M | A | -0.1600 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4265 | |
| 197 | E | A | -2.6122 | |
| 198 | L | A | -1.2371 | |
| 199 | Q | A | -2.5483 | |
| 200 | Q | A | -3.3508 | |
| 201 | D | A | -3.6061 | |
| 202 | R | A | -3.3516 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1520 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4034 | |
| 211 | S | A | -1.9306 | |
| 212 | T | A | -1.4841 | |
| 213 | R | A | -2.1694 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1772 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2575 | |
| 220 | L | A | 0.4467 | |
| 221 | K | A | -1.4168 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9985 | |
| 224 | N | A | -1.6154 | |
| 225 | E | A | -1.3499 | |
| 226 | A | A | -0.6682 | |
| 227 | Y | A | -0.4568 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7181 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1401 | |
| 234 | F | A | 0.0305 | |
| 235 | G | A | -0.9129 | |
| 236 | R | A | -2.6767 | |
| 237 | R | A | -2.9520 | |
| 238 | E | A | -2.1934 | |
| 239 | Q | A | -0.1463 | |
| 240 | V | A | 1.5757 | |
| 241 | Y | A | 1.2640 | |
| 242 | A | A | 0.1688 | |
| 243 | R | A | -1.3227 | |
| 244 | H | A | -1.1935 | |
| 245 | F | A | -0.2682 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.3893 | |
| 248 | R | A | -0.6791 | |
| 249 | A | A | -1.3857 | |
| 250 | G | A | -1.0638 | |
| 251 | P | A | -1.0809 | |
| 252 | D | A | -1.0661 | |
| 253 | G | A | -0.8047 | |
| 254 | A | A | -0.4175 | |
| 255 | P | A | -0.3041 | |
| 256 | L | A | 0.6506 | |
| 257 | P | A | 0.2096 | |
| 258 | A | A | 0.2233 | |
| 259 | A | A | 0.0046 | |
| 260 | P | A | -0.5151 | |
| 261 | P | A | -0.3800 | |
| 262 | P | A | -0.2787 | |
| 263 | S | A | 0.2372 | |
| 264 | P | A | 0.4611 | |
| 265 | L | A | 1.6285 | |
| 266 | F | A | 1.0922 | |
| 267 | T | A | 0.2127 | |
| 268 | P | A | 0.3501 | |
| 269 | P | A | 0.3014 | |
| 270 | P | A | -0.3027 | |
| 271 | P | A | -0.0815 | |
| 272 | S | A | -0.2581 | |
| 273 | S | A | 0.3727 | |
| 274 | P | A | 0.6866 | |
| 275 | L | A | 1.8763 | |
| 276 | A | A | 1.3143 | |
| 277 | V | A | 2.2054 | |
| 278 | P | A | 1.2817 | |
| 279 | P | A | 0.1792 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.3160 | |
| 282 | D | A | -0.8415 | |
| 283 | Y | A | 0.8136 | |
| 284 | F | A | 0.6459 | |
| 285 | G | A | 0.0914 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9425 | |
| 291 | L | A | 1.6168 | |
| 292 | V | A | 0.5918 | |
| 293 | S | A | -0.1899 | |
| 294 | S | A | -1.0030 | |
| 295 | D | A | -1.8803 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0572 | |
| 298 | L | A | -1.1862 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6718 | |
| 301 | R | A | -1.9230 | |
| 302 | P | A | -0.9685 | |
| 303 | F | A | -0.1857 | |
| 304 | W | A | -0.5272 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0823 | |
| 307 | R | A | -2.9275 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6592 | |
| 310 | G | A | -1.4256 | |
| 311 | N | A | -1.3932 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8627 | |
| 319 | N | A | -0.8734 | |
| 320 | E | A | -1.0356 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3738 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1849 | |
| 333 | N | A | 0.4236 | |
| 334 | F | A | 1.4794 | |
| 335 | T | A | 0.7459 | |
| 336 | I | A | 0.3794 | |
| 337 | S | A | -0.9983 | |
| 338 | Q | A | -1.7611 | |
| 339 | Q | A | -1.3162 | |
| 340 | L | A | 0.6483 | |
| 341 | C | A | 0.2805 | |
| 342 | T | A | -0.3035 | |
| 343 | P | A | -0.8759 | |
| 344 | E | A | -2.2537 | |
| 345 | N | A | -2.0503 | |
| 346 | N | A | -1.4182 | |
| 347 | V | A | 0.6224 | |
| 348 | Y | A | 0.9734 | |
| 349 | D | A | -0.2010 | |
| 350 | P | A | -0.4160 | |
| 351 | S | A | -0.3309 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.8079 | |
| 354 | K | A | -1.8393 | |
| 355 | N | A | -1.7928 | |
| 356 | Y | A | -0.1118 | |
| 357 | L | A | 0.5734 | |
| 358 | R | A | 0.9071 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4747 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0077 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9257 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6592 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3040 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3203 | |
| 376 | L | A | -1.7509 | |
| 377 | D | A | -2.0469 | |
| 378 | P | A | -1.0711 | |
| 379 | G | A | -1.0233 | |
| 380 | V | A | -0.9334 | |
| 381 | L | A | -0.5468 | |
| 382 | A | A | -0.6607 | |
| 383 | H | A | -0.8429 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3917 | |
| 386 | T | A | -0.5667 | |
| 387 | M | A | -0.3254 | |
| 388 | N | A | -0.8621 | |
| 389 | P | A | -1.2734 | |
| 390 | T | A | -1.4890 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4860 | |
| 393 | E | A | -3.0238 | |
| 394 | N | A | -2.5839 | |
| 395 | W | A | -1.4371 | |
| 396 | N | A | -1.1991 | |
| 397 | L | A | -0.1342 | |
| 398 | G | A | 0.5979 | |
| 399 | F | A | 2.4552 | |
| 400 | V | A | 2.0704 | |
| 401 | P | A | 0.0826 | |
| 402 | P | A | -1.7864 | |
| 403 | K | A | -3.4159 | |
| 404 | E | A | -3.7168 | |
| 405 | R | A | -3.8556 | |
| 406 | E | A | -3.7147 | |
| 407 | D | A | -2.8202 | |
| 408 | P | A | -1.7311 | |
| 409 | Y | A | -0.9967 | |
| 410 | K | A | -2.0947 | |
| 411 | G | A | -0.6372 | |
| 412 | L | A | 0.6617 | |
| 413 | I | A | 1.5753 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4081 | |
| 416 | E | A | -1.6934 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9451 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0761 | |
| 421 | E | A | -2.7900 | |
| 422 | R | A | -2.5838 | |
| 423 | F | A | -1.3040 | |
| 424 | S | A | -1.4697 | |
| 425 | Q | A | -1.7947 | |
| 426 | D | A | -2.8999 | |
| 427 | L | A | -1.9945 | |
| 428 | D | A | -2.7873 | |
| 429 | Q | A | -2.6150 | |
| 430 | F | A | -1.4200 | |
| 431 | A | A | -0.8793 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5258 | |
| 435 | K | A | -0.6772 | |
| 436 | F | A | 0.1822 | |
| 437 | L | A | 1.0544 | |
| 438 | Y | A | 0.8472 | |
| 439 | Q | A | -0.2523 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine