| Chain sequence(s) |
B: CGSGMVVVTAKVVKTEEGDYIKVTVEGDSSSKIAGKLAKKAKEEVEELWEKYGEAEVTLKEGEL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:43)
[INFO] Main: Simulation completed successfully. (00:02:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | B | -0.1367 | |
| 2 | G | B | -0.7670 | |
| 3 | S | B | -0.4891 | |
| 4 | G | B | -0.8054 | |
| 5 | M | B | -0.3889 | |
| 6 | V | B | 0.0000 | |
| 7 | V | B | -1.0315 | |
| 8 | V | B | 0.0000 | |
| 9 | T | B | -0.9100 | |
| 10 | A | B | 0.0000 | |
| 11 | K | B | -2.3112 | |
| 12 | V | B | 0.0000 | |
| 13 | V | B | -1.6165 | |
| 14 | K | B | -3.0261 | |
| 15 | T | B | -2.7588 | |
| 16 | E | B | -3.4622 | |
| 17 | E | B | -3.3556 | |
| 18 | G | B | -2.7474 | |
| 19 | D | B | -2.7877 | |
| 20 | Y | B | -0.8490 | |
| 21 | I | B | -1.2197 | |
| 22 | K | B | -1.2595 | |
| 23 | V | B | -0.5941 | |
| 24 | T | B | -0.3684 | |
| 25 | V | B | -0.7898 | |
| 26 | E | B | -2.1128 | |
| 27 | G | B | -1.9915 | |
| 28 | D | B | -2.5071 | |
| 29 | S | B | -1.7724 | |
| 30 | S | B | -1.1694 | |
| 31 | S | B | -1.6206 | |
| 32 | K | B | -2.2061 | |
| 33 | I | B | -1.5546 | |
| 34 | A | B | 0.0000 | |
| 35 | G | B | -2.0845 | |
| 36 | K | B | -2.5661 | |
| 37 | L | B | 0.0000 | |
| 38 | A | B | -2.2172 | |
| 39 | K | B | -3.4378 | |
| 40 | K | B | -3.1693 | |
| 41 | A | B | 0.0000 | |
| 42 | K | B | -4.0503 | |
| 43 | E | B | -4.4118 | |
| 44 | E | B | -4.1220 | |
| 45 | V | B | 0.0000 | |
| 46 | E | B | -4.8733 | |
| 47 | E | B | -4.4400 | |
| 48 | L | B | -3.1995 | |
| 49 | W | B | -3.2373 | |
| 50 | E | B | -3.6194 | |
| 51 | K | B | -2.8491 | |
| 52 | Y | B | -0.8533 | |
| 53 | G | B | -1.8203 | |
| 54 | E | B | -3.0067 | |
| 55 | A | B | -2.6946 | |
| 56 | E | B | -2.8528 | |
| 57 | V | B | 0.0000 | |
| 58 | T | B | -0.7178 | |
| 59 | L | B | -0.5015 | |
| 60 | K | B | -1.1828 | |
| 61 | E | B | -1.2898 | |
| 62 | G | B | -1.2930 | |
| 63 | E | B | -1.7206 | |
| 64 | L | B | -0.1099 |