| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWAWNRHDFDSFLIQYQESEKVGEAIVLTVPGSERSYDLTGLKPGTEYTVSIYGVHWTVLRPFIDSNPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:55)
[INFO] Main: Simulation completed successfully. (00:00:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.3984 | |
| 2 | P | A | 0.2625 | |
| 3 | A | A | -0.3615 | |
| 4 | P | A | -0.7289 | |
| 5 | K | A | -1.8055 | |
| 6 | N | A | -1.3553 | |
| 7 | L | A | 0.0510 | |
| 8 | V | A | 1.5596 | |
| 9 | V | A | 0.9643 | |
| 10 | S | A | -0.5607 | |
| 11 | R | A | -2.0137 | |
| 12 | V | A | -1.0002 | |
| 13 | T | A | -1.7547 | |
| 14 | E | A | -2.9836 | |
| 15 | D | A | -2.6406 | |
| 16 | S | A | -2.0291 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.1616 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.0050 | |
| 21 | W | A | 0.0000 | |
| 22 | A | A | -1.1464 | |
| 23 | W | A | -2.0263 | |
| 24 | N | A | -2.6984 | |
| 25 | R | A | -3.4005 | |
| 26 | H | A | -3.2286 | |
| 27 | D | A | -3.2320 | |
| 28 | F | A | -1.7388 | |
| 29 | D | A | -1.7657 | |
| 30 | S | A | -0.9680 | |
| 31 | F | A | 0.0000 | |
| 32 | L | A | 0.7119 | |
| 33 | I | A | 0.0000 | |
| 34 | Q | A | 0.4253 | |
| 35 | Y | A | 0.3657 | |
| 36 | Q | A | -0.7812 | |
| 37 | E | A | -1.7426 | |
| 38 | S | A | -1.5256 | |
| 39 | E | A | -2.4149 | |
| 40 | K | A | -1.9472 | |
| 41 | V | A | 0.0339 | |
| 42 | G | A | -0.9654 | |
| 43 | E | A | -1.6253 | |
| 44 | A | A | -0.3620 | |
| 45 | I | A | 0.7504 | |
| 46 | V | A | 1.4583 | |
| 47 | L | A | 1.1166 | |
| 48 | T | A | 0.3585 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -1.1099 | |
| 51 | G | A | -1.7650 | |
| 52 | S | A | -1.5826 | |
| 53 | E | A | -1.5361 | |
| 54 | R | A | -1.0874 | |
| 55 | S | A | -0.6957 | |
| 56 | Y | A | -0.7687 | |
| 57 | D | A | -1.6351 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.3221 | |
| 60 | G | A | -1.4711 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -2.9587 | |
| 63 | P | A | -2.5054 | |
| 64 | G | A | -1.8250 | |
| 65 | T | A | 0.0000 | |
| 66 | E | A | -1.9133 | |
| 67 | Y | A | 0.0000 | |
| 68 | T | A | 0.0483 | |
| 69 | V | A | 0.0000 | |
| 70 | S | A | 0.1672 | |
| 71 | I | A | 0.0000 | |
| 72 | Y | A | 0.3314 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | 0.0000 | |
| 75 | H | A | 0.1704 | |
| 76 | W | A | 1.2816 | |
| 77 | T | A | 1.5215 | |
| 78 | V | A | 2.4901 | |
| 79 | L | A | 2.0419 | |
| 80 | R | A | 0.3624 | |
| 81 | P | A | 0.9168 | |
| 82 | F | A | 2.0953 | |
| 83 | I | A | 1.7114 | |
| 84 | D | A | 0.3509 | |
| 85 | S | A | -0.3729 | |
| 86 | N | A | -1.2675 | |
| 87 | P | A | -0.7477 | |
| 88 | L | A | 0.0000 | |
| 89 | S | A | -0.0691 | |
| 90 | A | A | 1.0307 | |
| 91 | I | A | 1.8650 | |
| 92 | F | A | 0.0000 | |
| 93 | T | A | -0.7932 | |
| 94 | T | A | -1.8931 |