| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDHYYITYGETGHYWYYQAFAVPGSKSTATISGLSPGVDYTITVYASVLYGSRYYSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.8235 | |
| 2 | S | A | 0.8665 | |
| 3 | S | A | 1.0620 | |
| 4 | V | A | 0.8725 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.6119 | |
| 7 | K | A | -2.6789 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9114 | |
| 10 | V | A | 0.1138 | |
| 11 | V | A | 1.5470 | |
| 12 | A | A | 0.8982 | |
| 13 | A | A | 0.3249 | |
| 14 | T | A | -0.1981 | |
| 15 | P | A | -0.8084 | |
| 16 | T | A | -0.5388 | |
| 17 | S | A | -0.3188 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7486 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9539 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.6169 | |
| 24 | A | A | -1.1993 | |
| 25 | P | A | 0.0826 | |
| 26 | A | A | 0.5104 | |
| 27 | V | A | 0.6957 | |
| 28 | T | A | 0.0213 | |
| 29 | V | A | -0.4632 | |
| 30 | D | A | -1.6617 | |
| 31 | H | A | -1.2719 | |
| 32 | Y | A | 0.0000 | |
| 33 | Y | A | 0.6248 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -0.6891 | |
| 39 | T | A | -0.9740 | |
| 40 | G | A | -0.5494 | |
| 41 | H | A | 0.2630 | |
| 42 | Y | A | 2.0087 | |
| 43 | W | A | 2.3648 | |
| 44 | Y | A | 2.3481 | |
| 45 | Y | A | 1.9740 | |
| 46 | Q | A | 0.3444 | |
| 47 | A | A | 0.4353 | |
| 48 | F | A | 0.5111 | |
| 49 | A | A | 0.3539 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.2762 | |
| 52 | G | A | -1.5455 | |
| 53 | S | A | -1.4722 | |
| 54 | K | A | -2.2275 | |
| 55 | S | A | -1.4388 | |
| 56 | T | A | -0.7292 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2392 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.4776 | |
| 61 | G | A | -0.6886 | |
| 62 | L | A | 0.0000 | |
| 63 | S | A | -0.9142 | |
| 64 | P | A | -1.0754 | |
| 65 | G | A | -1.2305 | |
| 66 | V | A | -1.1967 | |
| 67 | D | A | -2.4654 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.8738 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | 0.1405 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.6366 | |
| 74 | A | A | 0.0000 | |
| 75 | S | A | 0.2097 | |
| 76 | V | A | 0.9071 | |
| 77 | L | A | 1.6135 | |
| 78 | Y | A | 1.7866 | |
| 79 | G | A | 0.3411 | |
| 80 | S | A | 0.0524 | |
| 81 | R | A | -0.6122 | |
| 82 | Y | A | 1.1033 | |
| 83 | Y | A | 0.9207 | |
| 84 | S | A | 0.6595 | |
| 85 | P | A | 0.5100 | |
| 86 | I | A | 0.2210 | |
| 87 | S | A | -0.5077 | |
| 88 | I | A | -0.7288 | |
| 89 | N | A | -1.8680 | |
| 90 | Y | A | -1.6360 | |
| 91 | R | A | -2.5935 | |
| 92 | T | A | -1.3296 |