| Chain sequence(s) |
B: GLTVWQQSPEVGQQLMQLALAEGELRIAWVSTSPSGSKERIAWATVRPVA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:27)
[INFO] Main: Simulation completed successfully. (00:00:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | B | 0.2513 | |
| 2 | L | B | 1.8029 | |
| 3 | T | B | 1.5711 | |
| 4 | V | B | 2.2440 | |
| 5 | W | B | 1.3764 | |
| 6 | Q | B | -0.7962 | |
| 7 | Q | B | -1.6401 | |
| 8 | S | B | -1.5826 | |
| 9 | P | B | -1.9513 | |
| 10 | E | B | -2.5466 | |
| 11 | V | B | -1.7234 | |
| 12 | G | B | -1.8892 | |
| 13 | Q | B | -2.3127 | |
| 14 | Q | B | -1.7268 | |
| 15 | L | B | -1.0003 | |
| 16 | M | B | -0.8640 | |
| 17 | Q | B | -0.9193 | |
| 18 | L | B | -0.4976 | |
| 19 | A | B | 0.0000 | |
| 20 | L | B | 0.2562 | |
| 21 | A | B | -0.4476 | |
| 22 | E | B | -2.3398 | |
| 23 | G | B | -1.6135 | |
| 24 | E | B | -2.6471 | |
| 25 | L | B | -1.9944 | |
| 26 | R | B | -2.1054 | |
| 27 | I | B | -0.2007 | |
| 28 | A | B | 0.1746 | |
| 29 | W | B | 0.7355 | |
| 30 | V | B | -0.2595 | |
| 31 | S | B | -1.1576 | |
| 32 | T | B | -1.5941 | |
| 33 | S | B | -1.1131 | |
| 34 | P | B | -0.7504 | |
| 35 | S | B | -0.7821 | |
| 36 | G | B | -1.2391 | |
| 37 | S | B | -1.6700 | |
| 38 | K | B | -2.9897 | |
| 39 | E | B | -3.1054 | |
| 40 | R | B | -2.0429 | |
| 41 | I | B | -0.1191 | |
| 42 | A | B | 0.6054 | |
| 43 | W | B | 0.9432 | |
| 44 | A | B | 0.0873 | |
| 45 | T | B | -1.1107 | |
| 46 | V | B | -1.1502 | |
| 47 | R | B | -1.9972 | |
| 48 | P | B | 0.0000 | |
| 49 | V | B | 1.3762 | |
| 50 | A | B | 0.8981 |