Project name: 969584397e6bff

Status: done

Started: 2026-02-08 15:54:25
Settings
Chain sequence(s) L: DLPTLGATG
input PDB
Selected Chain(s) L
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with L chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:02)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:02)
Show buried residues

Minimal score value
-1.6332
Maximal score value
1.4482
Average score
0.0151
Total score value
0.1355

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 D L -1.6332
1 L L 1.1699
2 P L 0.1881
3 T L 0.1932
4 L L 1.4482
5 G L -0.0307
6 A L -0.0378
7 T L -0.1827
8 G L -0.9795
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018