| Chain sequence(s) |
B: SSKLIQDHLVQVSAGGPLSSITWVWGGDATLTTDLTLPAGETVRLRAETA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:29)
[INFO] Main: Simulation completed successfully. (00:00:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -0.8116 | |
| 2 | S | B | -1.2127 | |
| 3 | K | B | -1.8211 | |
| 4 | L | B | -1.1488 | |
| 5 | I | B | -0.3880 | |
| 6 | Q | B | -1.9429 | |
| 7 | D | B | -2.5599 | |
| 8 | H | B | -2.3198 | |
| 9 | L | B | -1.0592 | |
| 10 | V | B | -0.9530 | |
| 11 | Q | B | -1.6820 | |
| 12 | V | B | 0.0000 | |
| 13 | S | B | -0.9795 | |
| 14 | A | B | -0.8938 | |
| 15 | G | B | -0.6790 | |
| 16 | G | B | -0.5916 | |
| 17 | P | B | -0.5342 | |
| 18 | L | B | -0.2507 | |
| 19 | S | B | -0.4520 | |
| 20 | S | B | -0.6047 | |
| 21 | I | B | 0.2680 | |
| 22 | T | B | 0.6732 | |
| 23 | W | B | 1.4144 | |
| 24 | V | B | 1.8494 | |
| 25 | W | B | 0.7432 | |
| 26 | G | B | -0.4778 | |
| 27 | G | B | -1.0265 | |
| 28 | D | B | -1.3704 | |
| 29 | A | B | -0.0506 | |
| 30 | T | B | 0.8447 | |
| 31 | L | B | 1.4497 | |
| 32 | T | B | 0.4422 | |
| 33 | T | B | -0.4855 | |
| 34 | D | B | -1.5592 | |
| 35 | L | B | -0.3549 | |
| 36 | T | B | -0.3210 | |
| 37 | L | B | 0.0000 | |
| 38 | P | B | -0.8680 | |
| 39 | A | B | -1.1541 | |
| 40 | G | B | -1.5354 | |
| 41 | E | B | -2.0694 | |
| 42 | T | B | -1.3581 | |
| 43 | V | B | -1.3339 | |
| 44 | R | B | -2.4758 | |
| 45 | L | B | -2.2394 | |
| 46 | R | B | -3.0004 | |
| 47 | A | B | -2.1339 | |
| 48 | E | B | -2.2680 | |
| 49 | T | B | -1.2977 | |
| 50 | A | B | -0.7780 |