| Chain sequence(s) |
A: GTPVGNNKCWAIGTTCSDDCDCCPEHHCHCPAGKWLPGLFRCTCQVTESDKVNKCPPAE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40)
[INFO] Main: Simulation completed successfully. (00:00:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.3672 | |
| 2 | T | A | -0.4172 | |
| 3 | P | A | -0.0128 | |
| 4 | V | A | 0.4786 | |
| 5 | G | A | -0.9925 | |
| 6 | N | A | -1.8452 | |
| 7 | N | A | -1.8599 | |
| 8 | K | A | -1.9330 | |
| 9 | C | A | 0.0385 | |
| 10 | W | A | 0.9073 | |
| 11 | A | A | 1.1408 | |
| 12 | I | A | 2.1834 | |
| 13 | G | A | 0.7819 | |
| 14 | T | A | 0.2457 | |
| 15 | T | A | -0.2717 | |
| 16 | C | A | -0.5741 | |
| 17 | S | A | -1.3185 | |
| 18 | D | A | -3.0834 | |
| 19 | D | A | -3.3135 | |
| 20 | C | A | 0.0000 | |
| 21 | D | A | 0.0000 | |
| 22 | C | A | 0.0000 | |
| 23 | C | A | -0.4534 | |
| 24 | P | A | 0.0000 | |
| 25 | E | A | -1.7749 | |
| 26 | H | A | -0.3812 | |
| 27 | H | A | -0.6492 | |
| 28 | C | A | -0.2329 | |
| 29 | H | A | -0.6782 | |
| 30 | C | A | 0.3592 | |
| 31 | P | A | 0.2069 | |
| 32 | A | A | 0.1306 | |
| 33 | G | A | 0.0334 | |
| 34 | K | A | -0.7566 | |
| 35 | W | A | 1.0467 | |
| 36 | L | A | 1.5417 | |
| 37 | P | A | 0.7029 | |
| 38 | G | A | 0.6134 | |
| 39 | L | A | 1.7309 | |
| 40 | F | A | 1.6790 | |
| 41 | R | A | -0.4817 | |
| 42 | C | A | -0.2087 | |
| 43 | T | A | -0.1124 | |
| 44 | C | A | 0.0000 | |
| 45 | Q | A | 0.2384 | |
| 46 | V | A | 0.7832 | |
| 47 | T | A | -1.2890 | |
| 48 | E | A | -2.5030 | |
| 49 | S | A | -2.3400 | |
| 50 | D | A | -2.8986 | |
| 51 | K | A | -3.0022 | |
| 52 | V | A | -1.5167 | |
| 53 | N | A | 0.0000 | |
| 54 | K | A | -2.1950 | |
| 55 | C | A | -1.6835 | |
| 56 | P | A | -1.0515 | |
| 57 | P | A | -1.4240 | |
| 58 | A | A | -1.3073 | |
| 59 | E | A | -1.7068 |