Project name: query_structure

Status: done

Started: 2026-03-16 23:46:11
Settings
Chain sequence(s) A: GTPVGNNKCWAIGTTCSDDCDCCPEHHCHCPAGKWLPGLFRCTCQVTESDKVNKCPPAE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:40)
Show buried residues

Minimal score value
-3.3135
Maximal score value
2.1834
Average score
-0.505
Total score value
-29.7933

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.3672
2 T A -0.4172
3 P A -0.0128
4 V A 0.4786
5 G A -0.9925
6 N A -1.8452
7 N A -1.8599
8 K A -1.9330
9 C A 0.0385
10 W A 0.9073
11 A A 1.1408
12 I A 2.1834
13 G A 0.7819
14 T A 0.2457
15 T A -0.2717
16 C A -0.5741
17 S A -1.3185
18 D A -3.0834
19 D A -3.3135
20 C A 0.0000
21 D A 0.0000
22 C A 0.0000
23 C A -0.4534
24 P A 0.0000
25 E A -1.7749
26 H A -0.3812
27 H A -0.6492
28 C A -0.2329
29 H A -0.6782
30 C A 0.3592
31 P A 0.2069
32 A A 0.1306
33 G A 0.0334
34 K A -0.7566
35 W A 1.0467
36 L A 1.5417
37 P A 0.7029
38 G A 0.6134
39 L A 1.7309
40 F A 1.6790
41 R A -0.4817
42 C A -0.2087
43 T A -0.1124
44 C A 0.0000
45 Q A 0.2384
46 V A 0.7832
47 T A -1.2890
48 E A -2.5030
49 S A -2.3400
50 D A -2.8986
51 K A -3.0022
52 V A -1.5167
53 N A 0.0000
54 K A -2.1950
55 C A -1.6835
56 P A -1.0515
57 P A -1.4240
58 A A -1.3073
59 E A -1.7068
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Laboratory of Theory of Biopolymers 2018