| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKDGKVVVPKVSGNQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAAPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPEGHPLPSSPPPSPLYVPPPPSSPYATLPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPENNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9404 | |
| 2 | L | A | 1.9607 | |
| 3 | P | A | 0.8310 | |
| 4 | P | A | 0.3783 | |
| 5 | T | A | 0.1271 | |
| 6 | T | A | 0.1315 | |
| 7 | P | A | 0.1849 | |
| 8 | V | A | 1.2088 | |
| 9 | A | A | 0.0813 | |
| 10 | K | A | -1.0297 | |
| 11 | V | A | -0.1782 | |
| 12 | Q | A | -1.3985 | |
| 13 | S | A | -1.5428 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3860 | |
| 16 | E | A | -2.4205 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4671 | |
| 20 | P | A | 0.1331 | |
| 21 | T | A | 0.1584 | |
| 22 | S | A | -0.0974 | |
| 23 | L | A | 0.0881 | |
| 24 | F | A | -0.0291 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2826 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8814 | |
| 31 | R | A | -2.6685 | |
| 32 | L | A | -0.7864 | |
| 33 | L | A | 1.1627 | |
| 34 | T | A | 1.3609 | |
| 35 | V | A | 1.8080 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2173 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6298 | |
| 40 | K | A | -1.6481 | |
| 41 | D | A | -0.9463 | |
| 42 | I | A | 0.8148 | |
| 43 | V | A | 0.8740 | |
| 44 | K | A | -1.4277 | |
| 45 | D | A | -2.4450 | |
| 46 | G | A | -1.4851 | |
| 47 | K | A | -1.1460 | |
| 48 | V | A | 1.3247 | |
| 49 | V | A | 1.9361 | |
| 50 | V | A | 1.2219 | |
| 51 | P | A | 0.4058 | |
| 52 | K | A | -0.6730 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | N | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1484 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3904 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2685 | |
| 70 | K | A | -1.7887 | |
| 71 | F | A | -0.6395 | |
| 72 | A | A | -0.5803 | |
| 73 | L | A | -0.8671 | |
| 74 | P | A | -1.2052 | |
| 75 | Q | A | -2.5006 | |
| 76 | K | A | -3.1055 | |
| 77 | D | A | -2.9859 | |
| 78 | F | A | -1.6692 | |
| 79 | Y | A | -1.8832 | |
| 80 | D | A | -2.6801 | |
| 81 | P | A | -2.2992 | |
| 82 | E | A | -3.0428 | |
| 83 | K | A | -3.3877 | |
| 84 | E | A | -2.4470 | |
| 85 | R | A | -1.2837 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6364 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9495 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3293 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6933 | |
| 99 | G | A | -0.5494 | |
| 100 | P | A | -0.4131 | |
| 101 | L | A | 0.0336 | |
| 102 | G | A | -0.1110 | |
| 103 | K | A | -0.3824 | |
| 104 | G | A | -0.3262 | |
| 105 | T | A | -0.3906 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1457 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4009 | |
| 110 | L | A | 0.1039 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1259 | |
| 113 | K | A | -0.4703 | |
| 114 | L | A | -1.1240 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.1697 | |
| 117 | T | A | -0.8207 | |
| 118 | E | A | -1.7970 | |
| 119 | N | A | -1.9831 | |
| 120 | P | A | -1.2911 | |
| 121 | T | A | -0.6286 | |
| 122 | A | A | -0.2987 | |
| 123 | P | A | -0.0500 | |
| 124 | V | A | -0.2086 | |
| 125 | H | A | -1.4101 | |
| 126 | E | A | -2.3882 | |
| 127 | G | A | -2.0481 | |
| 128 | A | A | -1.5267 | |
| 129 | D | A | -2.4224 | |
| 130 | D | A | -1.9982 | |
| 131 | R | A | -1.0849 | |
| 132 | V | A | 0.2477 | |
| 133 | A | A | 0.4317 | |
| 134 | F | A | 0.2756 | |
| 135 | S | A | -0.0707 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6057 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5570 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1997 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1598 | |
| 157 | D | A | 0.5281 | |
| 158 | L | A | 1.2535 | |
| 159 | A | A | 1.0770 | |
| 160 | A | A | 0.4025 | |
| 161 | P | A | 0.6322 | |
| 162 | C | A | 0.5950 | |
| 163 | P | A | 0.0493 | |
| 164 | G | A | -0.0967 | |
| 165 | L | A | 0.5586 | |
| 166 | P | A | -0.1274 | |
| 167 | P | A | -0.3458 | |
| 168 | G | A | -0.4532 | |
| 169 | A | A | -0.0288 | |
| 170 | C | A | 0.6429 | |
| 171 | P | A | 0.7735 | |
| 172 | P | A | 1.2144 | |
| 173 | I | A | 2.2522 | |
| 174 | Q | A | 1.1158 | |
| 175 | L | A | 1.4981 | |
| 176 | V | A | 0.8566 | |
| 177 | N | A | -0.3050 | |
| 178 | S | A | 0.0198 | |
| 179 | V | A | 0.4257 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3897 | |
| 182 | D | A | 0.0869 | |
| 183 | G | A | -0.1576 | |
| 184 | D | A | -0.5374 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0961 | |
| 190 | F | A | 0.0592 | |
| 191 | G | A | -0.1033 | |
| 192 | N | A | -0.2562 | |
| 193 | M | A | -0.1295 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4666 | |
| 197 | E | A | -2.7203 | |
| 198 | L | A | -1.2881 | |
| 199 | Q | A | -2.6101 | |
| 200 | Q | A | -3.3567 | |
| 201 | D | A | -3.5102 | |
| 202 | R | A | -3.3656 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1838 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3717 | |
| 211 | S | A | -1.9213 | |
| 212 | T | A | -1.4528 | |
| 213 | R | A | -2.0984 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1577 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3794 | |
| 220 | L | A | 0.6105 | |
| 221 | K | A | -1.1014 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8136 | |
| 224 | N | A | -1.4906 | |
| 225 | E | A | -1.2323 | |
| 226 | A | A | -0.6082 | |
| 227 | Y | A | -0.3732 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6797 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0767 | |
| 234 | F | A | 0.2664 | |
| 235 | G | A | -0.7964 | |
| 236 | R | A | -2.5518 | |
| 237 | R | A | -2.7595 | |
| 238 | E | A | -2.0540 | |
| 239 | Q | A | -0.1386 | |
| 240 | V | A | 1.3752 | |
| 241 | Y | A | 1.0644 | |
| 242 | A | A | 0.1947 | |
| 243 | R | A | -0.9583 | |
| 244 | H | A | -0.9517 | |
| 245 | F | A | 0.0383 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.8006 | |
| 249 | S | A | -1.4464 | |
| 250 | G | A | -1.1966 | |
| 251 | P | A | -1.1626 | |
| 252 | E | A | -1.3509 | |
| 253 | G | A | -1.2700 | |
| 254 | H | A | -1.4394 | |
| 255 | P | A | -0.9086 | |
| 256 | L | A | 0.3030 | |
| 257 | P | A | -0.0271 | |
| 258 | S | A | -0.0845 | |
| 259 | S | A | 0.0080 | |
| 260 | P | A | -0.3528 | |
| 261 | P | A | -0.0338 | |
| 262 | P | A | 0.1023 | |
| 263 | S | A | 0.0000 | |
| 264 | P | A | 0.7186 | |
| 265 | L | A | 1.8705 | |
| 266 | Y | A | 1.7299 | |
| 267 | V | A | 1.9258 | |
| 268 | P | A | 0.9327 | |
| 269 | P | A | 0.4241 | |
| 270 | P | A | -0.1716 | |
| 271 | P | A | -0.3949 | |
| 272 | S | A | -0.3311 | |
| 273 | S | A | -0.0821 | |
| 274 | P | A | 0.1113 | |
| 275 | Y | A | 0.8352 | |
| 276 | A | A | 0.3270 | |
| 277 | T | A | 0.3401 | |
| 278 | L | A | 0.7717 | |
| 279 | P | A | -0.1333 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.3414 | |
| 282 | D | A | -0.9735 | |
| 283 | Y | A | 0.7917 | |
| 284 | F | A | 0.6738 | |
| 285 | G | A | 0.2435 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9196 | |
| 291 | L | A | 1.6634 | |
| 292 | V | A | 0.6716 | |
| 293 | S | A | -0.1535 | |
| 294 | S | A | -0.9633 | |
| 295 | D | A | -1.8356 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0856 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6094 | |
| 301 | R | A | -1.8134 | |
| 302 | P | A | -0.9548 | |
| 303 | F | A | -0.1799 | |
| 304 | W | A | -0.5579 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0818 | |
| 307 | R | A | -2.8321 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2685 | |
| 310 | G | A | -1.2314 | |
| 311 | N | A | -1.2722 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8089 | |
| 319 | N | A | -0.9284 | |
| 320 | E | A | -1.0328 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.2968 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0120 | |
| 333 | N | A | 0.5986 | |
| 334 | F | A | 1.7473 | |
| 335 | T | A | 0.9107 | |
| 336 | I | A | 0.4200 | |
| 337 | S | A | -1.1730 | |
| 338 | Q | A | -2.0755 | |
| 339 | Q | A | -1.9416 | |
| 340 | L | A | -0.0113 | |
| 341 | S | A | -0.4244 | |
| 342 | T | A | -1.0445 | |
| 343 | P | A | -1.6120 | |
| 344 | E | A | -2.6158 | |
| 345 | N | A | -2.0233 | |
| 346 | N | A | -1.3411 | |
| 347 | V | A | 0.7422 | |
| 348 | Y | A | 1.1028 | |
| 349 | D | A | -0.3230 | |
| 350 | P | A | -0.9044 | |
| 351 | S | A | -0.8118 | |
| 352 | N | A | -0.9500 | |
| 353 | F | A | -1.5075 | |
| 354 | K | A | -2.4656 | |
| 355 | N | A | -1.9439 | |
| 356 | Y | A | -0.0598 | |
| 357 | L | A | 0.7189 | |
| 358 | R | A | 0.9946 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3807 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0693 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0000 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6818 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2997 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3099 | |
| 376 | L | A | -1.7051 | |
| 377 | D | A | -1.9872 | |
| 378 | P | A | -1.0368 | |
| 379 | G | A | -1.0134 | |
| 380 | V | A | -0.9358 | |
| 381 | L | A | -0.5329 | |
| 382 | A | A | -0.6555 | |
| 383 | H | A | -0.8093 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4060 | |
| 386 | T | A | -0.5487 | |
| 387 | M | A | -0.2965 | |
| 388 | N | A | -0.8564 | |
| 389 | P | A | -1.2396 | |
| 390 | T | A | -1.4282 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4102 | |
| 393 | E | A | -2.7403 | |
| 394 | N | A | -2.3481 | |
| 395 | W | A | -1.3246 | |
| 396 | N | A | -1.0214 | |
| 397 | L | A | -0.1448 | |
| 398 | G | A | 0.5585 | |
| 399 | F | A | 2.4282 | |
| 400 | V | A | 1.8379 | |
| 401 | P | A | 0.0580 | |
| 402 | P | A | -1.8320 | |
| 403 | K | A | -3.3159 | |
| 404 | E | A | -3.7666 | |
| 405 | R | A | -3.8967 | |
| 406 | E | A | -3.7789 | |
| 407 | D | A | -2.8675 | |
| 408 | P | A | -1.7605 | |
| 409 | Y | A | -0.9848 | |
| 410 | K | A | -2.1160 | |
| 411 | G | A | -0.6396 | |
| 412 | L | A | 0.6749 | |
| 413 | I | A | 1.5840 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4054 | |
| 416 | E | A | -1.7155 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9469 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0312 | |
| 421 | E | A | -2.7503 | |
| 422 | R | A | -2.5055 | |
| 423 | F | A | -1.2470 | |
| 424 | S | A | -1.4540 | |
| 425 | Q | A | -1.7389 | |
| 426 | D | A | -2.9091 | |
| 427 | L | A | -1.9979 | |
| 428 | D | A | -2.7957 | |
| 429 | Q | A | -2.6350 | |
| 430 | F | A | -1.4409 | |
| 431 | A | A | -0.8989 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5668 | |
| 435 | K | A | -0.6937 | |
| 436 | F | A | 0.1542 | |
| 437 | L | A | 1.0347 | |
| 438 | Y | A | 0.8333 | |
| 439 | Q | A | -0.2690 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine