Project name: model1_1

Status: done

Started: 2026-06-20 12:16:04
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Chain sequence(s) A: VQIVYKGGGGSGGGGSVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFSGGGGSGFLGGRMKQIEDKIEEILSKIYHIENEIARIKKLIGER
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:28)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:29)
Show buried residues

Minimal score value
-4.7441
Maximal score value
2.919
Average score
-0.6581
Total score value
-75.0257

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.9229
2 Q A 1.3212
3 I A 2.9190
4 V A 2.8340
5 Y A 1.3557
6 K A -1.0271
7 G A -1.2725
8 G A -1.5928
9 G A -1.5748
10 G A -1.2839
11 S A -1.0836
12 G A -1.1354
13 G A -1.3522
14 G A -1.0466
15 G A -0.9492
16 S A 0.1173
17 V A 0.5163
18 I A 0.8434
19 C A 0.0000
20 D A -1.8419
21 G A -0.9694
22 C A -0.1817
23 N A -1.2756
24 G A -0.2048
25 P A 0.4647
26 V A 1.1964
27 V A 2.0525
28 G A 0.5598
29 T A 0.5450
30 R A 0.3376
31 Y A -0.0195
32 K A -0.2454
33 C A 0.0000
34 S A 0.4274
35 V A 1.3640
36 C A 0.3975
37 P A -0.4197
38 D A -1.6162
39 Y A -0.8386
40 D A 0.0000
41 L A 0.0000
42 C A 0.0000
43 S A 0.3397
44 V A 1.2212
45 C A 0.0000
46 E A -1.1359
47 G A -0.9238
48 K A -1.8821
49 G A -1.5438
50 L A -1.3061
51 H A -1.7868
52 R A -2.5892
53 G A -1.5108
54 H A -1.0157
55 T A -0.5173
56 K A -0.3471
57 L A 0.6271
58 A A 0.5512
59 F A 0.8755
60 P A 0.4866
61 S A 0.4952
62 P A 0.4344
63 F A 1.6090
64 G A 0.0473
65 H A -0.6265
66 L A 0.5578
67 S A -0.4907
68 E A -1.5880
69 G A -0.5272
70 F A 0.9622
71 S A 0.0224
72 G A -0.6218
73 G A -1.1355
74 G A -1.1158
75 G A -0.8884
76 S A -0.1822
77 G A 0.1016
78 F A 1.5894
79 L A 0.6050
80 G A -0.6467
81 G A -1.5225
82 R A -2.5891
83 M A -2.0661
84 K A -3.7163
85 Q A -3.7498
86 I A -2.9483
87 E A -4.1758
88 D A -4.7441
89 K A -3.5261
90 I A -2.1357
91 E A -3.2389
92 E A -3.1315
93 I A -0.8130
94 L A 0.1751
95 S A -0.5775
96 K A -1.0494
97 I A 0.3755
98 Y A 0.6287
99 H A -0.6959
100 I A 0.2751
101 E A -1.4487
102 N A -2.0578
103 E A -1.9490
104 I A -0.8467
105 A A -1.5957
106 R A -2.0056
107 I A -0.9036
108 K A -1.8697
109 K A -2.5871
110 L A -0.8467
111 I A -0.1315
112 G A -1.8738
113 E A -2.7008
114 R A -2.3714
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Laboratory of Theory of Biopolymers 2018