| Chain sequence(s) |
A: VQIVYKGGGGSGGGGSVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFSGGGGSGFLGGRMKQIEDKIEEILSKIYHIENEIARIKKLIGER
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:28)
[INFO] Main: Simulation completed successfully. (00:02:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.9229 | |
| 2 | Q | A | 1.3212 | |
| 3 | I | A | 2.9190 | |
| 4 | V | A | 2.8340 | |
| 5 | Y | A | 1.3557 | |
| 6 | K | A | -1.0271 | |
| 7 | G | A | -1.2725 | |
| 8 | G | A | -1.5928 | |
| 9 | G | A | -1.5748 | |
| 10 | G | A | -1.2839 | |
| 11 | S | A | -1.0836 | |
| 12 | G | A | -1.1354 | |
| 13 | G | A | -1.3522 | |
| 14 | G | A | -1.0466 | |
| 15 | G | A | -0.9492 | |
| 16 | S | A | 0.1173 | |
| 17 | V | A | 0.5163 | |
| 18 | I | A | 0.8434 | |
| 19 | C | A | 0.0000 | |
| 20 | D | A | -1.8419 | |
| 21 | G | A | -0.9694 | |
| 22 | C | A | -0.1817 | |
| 23 | N | A | -1.2756 | |
| 24 | G | A | -0.2048 | |
| 25 | P | A | 0.4647 | |
| 26 | V | A | 1.1964 | |
| 27 | V | A | 2.0525 | |
| 28 | G | A | 0.5598 | |
| 29 | T | A | 0.5450 | |
| 30 | R | A | 0.3376 | |
| 31 | Y | A | -0.0195 | |
| 32 | K | A | -0.2454 | |
| 33 | C | A | 0.0000 | |
| 34 | S | A | 0.4274 | |
| 35 | V | A | 1.3640 | |
| 36 | C | A | 0.3975 | |
| 37 | P | A | -0.4197 | |
| 38 | D | A | -1.6162 | |
| 39 | Y | A | -0.8386 | |
| 40 | D | A | 0.0000 | |
| 41 | L | A | 0.0000 | |
| 42 | C | A | 0.0000 | |
| 43 | S | A | 0.3397 | |
| 44 | V | A | 1.2212 | |
| 45 | C | A | 0.0000 | |
| 46 | E | A | -1.1359 | |
| 47 | G | A | -0.9238 | |
| 48 | K | A | -1.8821 | |
| 49 | G | A | -1.5438 | |
| 50 | L | A | -1.3061 | |
| 51 | H | A | -1.7868 | |
| 52 | R | A | -2.5892 | |
| 53 | G | A | -1.5108 | |
| 54 | H | A | -1.0157 | |
| 55 | T | A | -0.5173 | |
| 56 | K | A | -0.3471 | |
| 57 | L | A | 0.6271 | |
| 58 | A | A | 0.5512 | |
| 59 | F | A | 0.8755 | |
| 60 | P | A | 0.4866 | |
| 61 | S | A | 0.4952 | |
| 62 | P | A | 0.4344 | |
| 63 | F | A | 1.6090 | |
| 64 | G | A | 0.0473 | |
| 65 | H | A | -0.6265 | |
| 66 | L | A | 0.5578 | |
| 67 | S | A | -0.4907 | |
| 68 | E | A | -1.5880 | |
| 69 | G | A | -0.5272 | |
| 70 | F | A | 0.9622 | |
| 71 | S | A | 0.0224 | |
| 72 | G | A | -0.6218 | |
| 73 | G | A | -1.1355 | |
| 74 | G | A | -1.1158 | |
| 75 | G | A | -0.8884 | |
| 76 | S | A | -0.1822 | |
| 77 | G | A | 0.1016 | |
| 78 | F | A | 1.5894 | |
| 79 | L | A | 0.6050 | |
| 80 | G | A | -0.6467 | |
| 81 | G | A | -1.5225 | |
| 82 | R | A | -2.5891 | |
| 83 | M | A | -2.0661 | |
| 84 | K | A | -3.7163 | |
| 85 | Q | A | -3.7498 | |
| 86 | I | A | -2.9483 | |
| 87 | E | A | -4.1758 | |
| 88 | D | A | -4.7441 | |
| 89 | K | A | -3.5261 | |
| 90 | I | A | -2.1357 | |
| 91 | E | A | -3.2389 | |
| 92 | E | A | -3.1315 | |
| 93 | I | A | -0.8130 | |
| 94 | L | A | 0.1751 | |
| 95 | S | A | -0.5775 | |
| 96 | K | A | -1.0494 | |
| 97 | I | A | 0.3755 | |
| 98 | Y | A | 0.6287 | |
| 99 | H | A | -0.6959 | |
| 100 | I | A | 0.2751 | |
| 101 | E | A | -1.4487 | |
| 102 | N | A | -2.0578 | |
| 103 | E | A | -1.9490 | |
| 104 | I | A | -0.8467 | |
| 105 | A | A | -1.5957 | |
| 106 | R | A | -2.0056 | |
| 107 | I | A | -0.9036 | |
| 108 | K | A | -1.8697 | |
| 109 | K | A | -2.5871 | |
| 110 | L | A | -0.8467 | |
| 111 | I | A | -0.1315 | |
| 112 | G | A | -1.8738 | |
| 113 | E | A | -2.7008 | |
| 114 | R | A | -2.3714 |