| Chain sequence(s) |
H: EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVRQSHGKNLEWLGLIFPYNGGTSYNQNFKGKATLTVDTSSSTAYMELLSLTSVDSAVYYCARGVRFALDYWGQGTSVSVSS
L: DVVMTQTPLSLPVSFGDQVSISCRSSQSLANSYGNTYLSWYLHKPGQSPQLLIYEISNRFSGVPDRFSGSGSGTDFTLNISTIKPEDLGMYYCLQGTHQPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:09)
[INFO] Main: Simulation completed successfully. (00:01:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1428 | |
| 2 | V | H | -1.4634 | |
| 3 | Q | H | -2.2071 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.2044 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -1.2170 | |
| 8 | G | H | -1.1522 | |
| 9 | P | H | -0.6311 | |
| 11 | E | H | -0.6419 | |
| 12 | L | H | 0.6463 | |
| 13 | V | H | -0.3615 | |
| 14 | K | H | -1.6553 | |
| 15 | P | H | -1.3157 | |
| 16 | G | H | -1.0134 | |
| 17 | A | H | -0.7458 | |
| 18 | S | H | -0.8018 | |
| 19 | M | H | 0.0000 | |
| 20 | K | H | -1.6528 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.8238 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.6499 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.3926 | |
| 27 | G | H | -1.2657 | |
| 28 | Y | H | -0.6281 | |
| 29 | S | H | -0.3260 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | 0.2119 | |
| 36 | G | H | 0.3152 | |
| 37 | Y | H | 0.5499 | |
| 38 | T | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.9035 | |
| 45 | S | H | -1.0505 | |
| 46 | H | H | -1.6097 | |
| 47 | G | H | -1.9282 | |
| 48 | K | H | -2.6264 | |
| 49 | N | H | -1.7888 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8629 | |
| 52 | W | H | 0.0000 | |
| 53 | L | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | L | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | F | H | 0.9851 | |
| 58 | P | H | 0.0000 | |
| 59 | Y | H | 0.8997 | |
| 62 | N | H | -0.5379 | |
| 63 | G | H | -0.3762 | |
| 64 | G | H | -0.1134 | |
| 65 | T | H | -0.0309 | |
| 66 | S | H | -0.3137 | |
| 67 | Y | H | -1.0364 | |
| 68 | N | H | 0.0000 | |
| 69 | Q | H | -2.7220 | |
| 70 | N | H | -2.4385 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -2.6619 | |
| 74 | G | H | -1.7230 | |
| 75 | K | H | -1.3630 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.7517 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | 0.0022 | |
| 80 | V | H | -0.0157 | |
| 81 | D | H | -0.6564 | |
| 82 | T | H | -0.4060 | |
| 83 | S | H | -0.4384 | |
| 84 | S | H | -0.5412 | |
| 85 | S | H | -0.5994 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.3965 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -1.1491 | |
| 91 | L | H | 0.0000 | |
| 92 | L | H | -0.5079 | |
| 93 | S | H | -0.5635 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -0.0375 | |
| 96 | S | H | 0.2249 | |
| 97 | V | H | 1.5076 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | 0.3498 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.0123 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | V | H | 0.3029 | |
| 109 | R | H | -1.0177 | |
| 113 | F | H | -0.3413 | |
| 114 | A | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.2844 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.9617 | |
| 121 | G | H | -1.0286 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | -0.3314 | |
| 124 | V | H | 0.0000 | |
| 125 | S | H | 0.0378 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6616 | |
| 128 | S | H | -0.7667 | |
| 1 | D | L | -1.9253 | |
| 2 | V | L | 0.0000 | |
| 3 | V | L | 0.7090 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.3593 | |
| 6 | Q | L | 0.0000 | |
| 7 | T | L | -0.0637 | |
| 8 | P | L | 0.4094 | |
| 9 | L | L | 1.1705 | |
| 10 | S | L | 0.0028 | |
| 11 | L | L | -0.1907 | |
| 12 | P | L | -0.7652 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -0.3947 | |
| 15 | F | L | 0.2457 | |
| 16 | G | L | -0.5772 | |
| 17 | D | L | -1.2431 | |
| 18 | Q | L | -1.5484 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.6239 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.8090 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.1842 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -0.8975 | |
| 27 | Q | L | -1.5273 | |
| 28 | S | L | -1.2050 | |
| 29 | L | L | 0.0000 | |
| 30 | A | L | -0.5580 | |
| 31 | N | L | -0.2749 | |
| 32 | S | L | 0.0951 | |
| 34 | Y | L | 0.7533 | |
| 35 | G | L | -0.2533 | |
| 36 | N | L | -0.6327 | |
| 37 | T | L | 0.0000 | |
| 38 | Y | L | 0.0000 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | L | L | 0.0000 | |
| 44 | H | L | -0.7510 | |
| 45 | K | L | -1.1597 | |
| 46 | P | L | -0.9118 | |
| 47 | G | L | -1.3497 | |
| 48 | Q | L | -1.8089 | |
| 49 | S | L | -1.1701 | |
| 50 | P | L | 0.0000 | |
| 51 | Q | L | -0.4754 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.2191 | |
| 56 | E | L | -0.7277 | |
| 57 | I | L | -0.5670 | |
| 65 | S | L | -0.9044 | |
| 66 | N | L | -1.3870 | |
| 67 | R | L | -1.9691 | |
| 68 | F | L | -0.6971 | |
| 69 | S | L | -0.6581 | |
| 70 | G | L | -0.8603 | |
| 71 | V | L | -1.0175 | |
| 72 | P | L | -1.2941 | |
| 74 | D | L | -2.2479 | |
| 75 | R | L | -1.6563 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.2057 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.6502 | |
| 80 | G | L | -0.8796 | |
| 83 | S | L | -0.9845 | |
| 84 | G | L | -1.1083 | |
| 85 | T | L | -1.5440 | |
| 86 | D | L | -1.7714 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7377 | |
| 89 | L | L | 0.0000 | |
| 90 | N | L | -0.8274 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4199 | |
| 93 | T | L | -0.9455 | |
| 94 | I | L | 0.0000 | |
| 95 | K | L | -1.1081 | |
| 96 | P | L | -0.9008 | |
| 97 | E | L | -1.6091 | |
| 98 | D | L | 0.0000 | |
| 99 | L | L | -0.5035 | |
| 100 | G | L | 0.0000 | |
| 101 | M | L | -0.2743 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | L | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | -0.4787 | |
| 108 | T | L | -0.6250 | |
| 109 | H | L | -1.3609 | |
| 114 | Q | L | -1.6525 | |
| 115 | P | L | 0.0000 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.3702 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.5643 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.7683 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.0231 | |
| 126 | I | L | 0.2702 | |
| 127 | K | L | -1.1047 |