Project name: 8SZY VHVL

Status: done

Started: 2026-03-30 05:23:21
Settings
Chain sequence(s) H: EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVRQSHGKNLEWLGLIFPYNGGTSYNQNFKGKATLTVDTSSSTAYMELLSLTSVDSAVYYCARGVRFALDYWGQGTSVSVSS
L: DVVMTQTPLSLPVSFGDQVSISCRSSQSLANSYGNTYLSWYLHKPGQSPQLLIYEISNRFSGVPDRFSGSGSGTDFTLNISTIKPEDLGMYYCLQGTHQPWTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:10)
Show buried residues

Minimal score value
-2.722
Maximal score value
1.5076
Average score
-0.4972
Total score value
-113.8488

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.1428
2 V H -1.4634
3 Q H -2.2071
4 L H 0.0000
5 Q H -2.2044
6 Q H 0.0000
7 S H -1.2170
8 G H -1.1522
9 P H -0.6311
11 E H -0.6419
12 L H 0.6463
13 V H -0.3615
14 K H -1.6553
15 P H -1.3157
16 G H -1.0134
17 A H -0.7458
18 S H -0.8018
19 M H 0.0000
20 K H -1.6528
21 I H 0.0000
22 S H -0.8238
23 C H 0.0000
24 K H -1.6499
25 A H 0.0000
26 S H -1.3926
27 G H -1.2657
28 Y H -0.6281
29 S H -0.3260
30 F H 0.0000
35 T H 0.2119
36 G H 0.3152
37 Y H 0.5499
38 T H 0.0000
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.9035
45 S H -1.0505
46 H H -1.6097
47 G H -1.9282
48 K H -2.6264
49 N H -1.7888
50 L H 0.0000
51 E H -0.8629
52 W H 0.0000
53 L H 0.0000
54 G H 0.0000
55 L H 0.0000
56 I H 0.0000
57 F H 0.9851
58 P H 0.0000
59 Y H 0.8997
62 N H -0.5379
63 G H -0.3762
64 G H -0.1134
65 T H -0.0309
66 S H -0.3137
67 Y H -1.0364
68 N H 0.0000
69 Q H -2.7220
70 N H -2.4385
71 F H 0.0000
72 K H -2.6619
74 G H -1.7230
75 K H -1.3630
76 A H 0.0000
77 T H -0.7517
78 L H 0.0000
79 T H 0.0022
80 V H -0.0157
81 D H -0.6564
82 T H -0.4060
83 S H -0.4384
84 S H -0.5412
85 S H -0.5994
86 T H 0.0000
87 A H 0.0000
88 Y H -0.3965
89 M H 0.0000
90 E H -1.1491
91 L H 0.0000
92 L H -0.5079
93 S H -0.5635
94 L H 0.0000
95 T H -0.0375
96 S H 0.2249
97 V H 1.5076
98 D H 0.0000
99 S H 0.3498
100 A H 0.0000
101 V H 0.0123
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 G H 0.0000
108 V H 0.3029
109 R H -1.0177
113 F H -0.3413
114 A H 0.0000
115 L H 0.0000
116 D H 0.0000
117 Y H 0.2844
118 W H 0.0000
119 G H 0.0000
120 Q H -1.9617
121 G H -1.0286
122 T H 0.0000
123 S H -0.3314
124 V H 0.0000
125 S H 0.0378
126 V H 0.0000
127 S H -0.6616
128 S H -0.7667
1 D L -1.9253
2 V L 0.0000
3 V L 0.7090
4 M L 0.0000
5 T L -0.3593
6 Q L 0.0000
7 T L -0.0637
8 P L 0.4094
9 L L 1.1705
10 S L 0.0028
11 L L -0.1907
12 P L -0.7652
13 V L 0.0000
14 S L -0.3947
15 F L 0.2457
16 G L -0.5772
17 D L -1.2431
18 Q L -1.5484
19 V L 0.0000
20 S L -0.6239
21 I L 0.0000
22 S L -0.8090
23 C L 0.0000
24 R L -2.1842
25 S L 0.0000
26 S L -0.8975
27 Q L -1.5273
28 S L -1.2050
29 L L 0.0000
30 A L -0.5580
31 N L -0.2749
32 S L 0.0951
34 Y L 0.7533
35 G L -0.2533
36 N L -0.6327
37 T L 0.0000
38 Y L 0.0000
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 L L 0.0000
44 H L -0.7510
45 K L -1.1597
46 P L -0.9118
47 G L -1.3497
48 Q L -1.8089
49 S L -1.1701
50 P L 0.0000
51 Q L -0.4754
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.2191
56 E L -0.7277
57 I L -0.5670
65 S L -0.9044
66 N L -1.3870
67 R L -1.9691
68 F L -0.6971
69 S L -0.6581
70 G L -0.8603
71 V L -1.0175
72 P L -1.2941
74 D L -2.2479
75 R L -1.6563
76 F L 0.0000
77 S L -1.2057
78 G L 0.0000
79 S L -0.6502
80 G L -0.8796
83 S L -0.9845
84 G L -1.1083
85 T L -1.5440
86 D L -1.7714
87 F L 0.0000
88 T L -0.7377
89 L L 0.0000
90 N L -0.8274
91 I L 0.0000
92 S L -1.4199
93 T L -0.9455
94 I L 0.0000
95 K L -1.1081
96 P L -0.9008
97 E L -1.6091
98 D L 0.0000
99 L L -0.5035
100 G L 0.0000
101 M L -0.2743
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 G L -0.4787
108 T L -0.6250
109 H L -1.3609
114 Q L -1.6525
115 P L 0.0000
116 W L 0.0000
117 T L -0.3702
118 F L 0.0000
119 G L 0.0000
120 G L -0.5643
121 G L 0.0000
122 T L 0.0000
123 K L -0.7683
124 L L 0.0000
125 E L -1.0231
126 I L 0.2702
127 K L -1.1047
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Laboratory of Theory of Biopolymers 2018