Project name: insulin_native_file

Status: done

Started: 2025-12-29 00:33:05
Settings
Chain sequence(s) A: GIVEQCCTSICSLYQLENYCN
B: FVNQQHLCGSHLVVEALYLLVCGERGFFYTPKT
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:35)
Show buried residues

Minimal score value
-2.2899
Maximal score value
2.6712
Average score
-0.1286
Total score value
-6.557

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.1229
2 I A 0.0000
3 V A -0.4759
4 E A -0.9077
5 Q A -0.4565
6 C A 0.0000
7 C A -0.2011
8 T A -0.1043
9 S A 0.0175
10 I A 0.3027
11 C A 0.0000
12 S A 0.4443
13 L A 0.8344
14 Y A 0.9635
15 Q A -0.5299
16 L A 0.0000
17 E A -0.7601
18 N A -1.1498
19 Y A 0.1298
20 C A -0.5464
21 N A -1.4849
1 F B 2.6712
2 V B 2.1249
3 N B 0.0624
4 Q B -0.5146
5 H B -1.1089
6 L B 0.0000
7 C B -0.3152
8 G B -0.7945
9 S B -1.0533
10 H B -1.5090
11 L B 0.0000
12 V B 0.3617
13 E B -0.9909
14 A B 0.0000
15 L B 0.0000
16 Y B 1.3155
17 L B 1.5683
18 V B 0.8447
19 C B 0.0000
20 G B -0.7475
21 E B -2.2629
22 R B -2.2899
23 G B -0.4811
24 F B 0.8199
25 F B 2.4000
26 Y B 1.8492
27 T B 0.2997
28 P B -0.8391
29 K B -1.9785
30 T B -0.9418
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018