| Chain sequence(s) |
A: GIVEQCCTSICSLYQLENYCN
B: FVNQQHLCGSHLVVEALYLLVCGERGFFYTPKT input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:34)
[INFO] Main: Simulation completed successfully. (00:00:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.1229 | |
| 2 | I | A | 0.0000 | |
| 3 | V | A | -0.4759 | |
| 4 | E | A | -0.9077 | |
| 5 | Q | A | -0.4565 | |
| 6 | C | A | 0.0000 | |
| 7 | C | A | -0.2011 | |
| 8 | T | A | -0.1043 | |
| 9 | S | A | 0.0175 | |
| 10 | I | A | 0.3027 | |
| 11 | C | A | 0.0000 | |
| 12 | S | A | 0.4443 | |
| 13 | L | A | 0.8344 | |
| 14 | Y | A | 0.9635 | |
| 15 | Q | A | -0.5299 | |
| 16 | L | A | 0.0000 | |
| 17 | E | A | -0.7601 | |
| 18 | N | A | -1.1498 | |
| 19 | Y | A | 0.1298 | |
| 20 | C | A | -0.5464 | |
| 21 | N | A | -1.4849 | |
| 1 | F | B | 2.6712 | |
| 2 | V | B | 2.1249 | |
| 3 | N | B | 0.0624 | |
| 4 | Q | B | -0.5146 | |
| 5 | H | B | -1.1089 | |
| 6 | L | B | 0.0000 | |
| 7 | C | B | -0.3152 | |
| 8 | G | B | -0.7945 | |
| 9 | S | B | -1.0533 | |
| 10 | H | B | -1.5090 | |
| 11 | L | B | 0.0000 | |
| 12 | V | B | 0.3617 | |
| 13 | E | B | -0.9909 | |
| 14 | A | B | 0.0000 | |
| 15 | L | B | 0.0000 | |
| 16 | Y | B | 1.3155 | |
| 17 | L | B | 1.5683 | |
| 18 | V | B | 0.8447 | |
| 19 | C | B | 0.0000 | |
| 20 | G | B | -0.7475 | |
| 21 | E | B | -2.2629 | |
| 22 | R | B | -2.2899 | |
| 23 | G | B | -0.4811 | |
| 24 | F | B | 0.8199 | |
| 25 | F | B | 2.4000 | |
| 26 | Y | B | 1.8492 | |
| 27 | T | B | 0.2997 | |
| 28 | P | B | -0.8391 | |
| 29 | K | B | -1.9785 | |
| 30 | T | B | -0.9418 |