Project name: Mb5-11_LVFVVL

Status: done

Started: 2026-07-06 06:36:19
Settings
Chain sequence(s) A: MQANSGSLEVVEASPTSLQLSWDAFHRYHNGFTHPVRYYRVTYGETGGNSPVQEFTVPGSKSTATFSGLKPGVDYTVTVYAVTWYPRYGYGESGPVSLNYRTELDKPSQ
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:03)
Show buried residues

Minimal score value
-2.8071
Maximal score value
1.5174
Average score
-0.7593
Total score value
-82.7629

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.2482
2 Q A -0.9745
3 A A -1.2394
4 N A -1.9514
5 S A -1.5707
6 G A 0.0000
7 S A -1.3450
8 L A -1.0434
9 E A -1.8709
10 V A -0.6260
11 V A 0.0065
12 E A -1.4580
13 A A -1.3080
14 S A -1.6342
15 P A -1.9837
16 T A -1.2475
17 S A -1.2086
18 L A 0.0000
19 Q A -0.9103
20 L A 0.0000
21 S A -1.1438
22 W A 0.0000
23 D A -2.5574
24 A A -1.6379
25 F A 0.0000
26 H A -1.2214
27 R A 0.0000
28 Y A 0.8982
29 H A 0.2780
30 N A -0.5565
31 G A 0.1470
32 F A 1.5174
33 T A 0.7656
34 H A 0.1294
35 P A -0.3653
36 V A -0.9999
37 R A -1.5476
38 Y A -0.8994
39 Y A 0.0000
40 R A -0.7788
41 V A 0.0000
42 T A -0.7015
43 Y A 0.0000
44 G A 0.0000
45 E A -1.2942
46 T A -1.0784
47 G A -1.1308
48 G A -1.2400
49 N A -1.4600
50 S A -0.8133
51 P A -0.3679
52 V A 0.3049
53 Q A -1.2242
54 E A -1.8307
55 F A -0.6807
56 T A -0.1550
57 V A -0.4314
58 P A -0.9927
59 G A -1.3019
60 S A -1.3150
61 K A -2.0710
62 S A -1.3253
63 T A -0.9150
64 A A 0.0000
65 T A -0.3659
66 F A 0.0000
67 S A -0.7698
68 G A -0.9892
69 L A 0.0000
70 K A -2.4277
71 P A -2.0723
72 G A -1.3171
73 V A -1.1164
74 D A -2.0442
75 Y A 0.0000
76 T A -0.7595
77 V A 0.0000
78 T A -0.5387
79 V A 0.0000
80 Y A -0.3650
81 A A 0.0000
82 V A 0.0000
83 T A 0.0000
84 W A 0.7120
85 Y A 0.0000
86 P A -0.4242
87 R A -1.1034
88 Y A 0.6935
89 G A 0.6519
90 Y A 0.9833
91 G A 0.3811
92 E A -0.6339
93 S A 0.0000
94 G A -1.0056
95 P A -0.6514
96 V A 0.0000
97 S A -0.6579
98 L A -0.7078
99 N A -1.7034
100 Y A -1.5169
101 R A -2.5140
102 T A 0.0000
103 E A -2.4978
104 L A -1.2741
105 D A -2.7225
106 K A -2.8071
107 P A -1.7881
108 S A -1.6374
109 Q A -1.6600
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Laboratory of Theory of Biopolymers 2018