| Chain sequence(s) |
A: MKHDHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGNWFAPLFPDALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMVLESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEALSGGKPGDDDVIEMM
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | IN209A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.855272 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:02:13)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:21)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:38)
[INFO] Main: Simulation completed successfully. (00:03:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.2456 | |
| 2 | K | A | -1.6056 | |
| 3 | H | A | -1.5291 | |
| 4 | D | A | -1.5571 | |
| 5 | H | A | -0.3965 | |
| 6 | F | A | 1.0399 | |
| 7 | V | A | 1.4670 | |
| 8 | V | A | 0.5655 | |
| 9 | Q | A | -0.2680 | |
| 10 | S | A | -0.8215 | |
| 11 | P | A | -1.9564 | |
| 12 | D | A | -2.7468 | |
| 13 | K | A | -2.7155 | |
| 14 | P | A | -1.8064 | |
| 15 | A | A | -1.7775 | |
| 16 | Q | A | -1.4483 | |
| 17 | Q | A | -0.9226 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.0000 | |
| 20 | L | A | 0.0000 | |
| 21 | L | A | 0.0000 | |
| 22 | F | A | 0.0000 | |
| 23 | H | A | 0.0000 | |
| 24 | G | A | 0.0000 | |
| 25 | V | A | 0.3604 | |
| 26 | G | A | -0.8602 | |
| 27 | D | A | -0.8081 | |
| 28 | N | A | -0.3126 | |
| 29 | P | A | 0.0000 | |
| 30 | V | A | 1.3933 | |
| 31 | A | A | 0.2063 | |
| 32 | M | A | 0.0000 | |
| 33 | G | A | 0.0000 | |
| 34 | E | A | -1.3071 | |
| 35 | I | A | -0.3191 | |
| 36 | G | A | 0.0000 | |
| 37 | N | A | -1.0629 | |
| 38 | W | A | -0.1139 | |
| 39 | F | A | 0.0000 | |
| 40 | A | A | -0.2010 | |
| 41 | P | A | -0.1985 | |
| 42 | L | A | 0.3711 | |
| 43 | F | A | 0.0000 | |
| 44 | P | A | -0.9087 | |
| 45 | D | A | -1.7582 | |
| 46 | A | A | 0.0000 | |
| 47 | L | A | -0.6719 | |
| 48 | V | A | 0.0000 | |
| 49 | V | A | 0.0000 | |
| 50 | S | A | 0.0000 | |
| 51 | V | A | 0.0000 | |
| 52 | G | A | 0.0000 | |
| 53 | G | A | 0.0000 | |
| 54 | A | A | -1.3689 | |
| 55 | E | A | -2.3025 | |
| 56 | P | A | -1.7614 | |
| 57 | S | A | -1.4079 | |
| 58 | G | A | -1.4027 | |
| 59 | N | A | -1.4834 | |
| 60 | P | A | -0.8912 | |
| 61 | A | A | -0.5832 | |
| 62 | G | A | 0.0000 | |
| 63 | R | A | -1.6747 | |
| 64 | Q | A | -0.8899 | |
| 65 | W | A | 0.0000 | |
| 66 | F | A | 0.0000 | |
| 67 | S | A | -0.4816 | |
| 68 | V | A | 0.2920 | |
| 69 | Q | A | -0.8953 | |
| 70 | G | A | -0.6795 | |
| 71 | I | A | -0.7591 | |
| 72 | T | A | -1.6164 | |
| 73 | E | A | -2.8130 | |
| 74 | D | A | -2.8574 | |
| 75 | N | A | -1.9087 | |
| 76 | R | A | -1.7701 | |
| 77 | Q | A | -1.6742 | |
| 78 | A | A | -1.4510 | |
| 79 | R | A | -0.9140 | |
| 80 | V | A | 0.0000 | |
| 81 | D | A | -1.9294 | |
| 82 | A | A | -0.8989 | |
| 83 | I | A | -0.4140 | |
| 84 | M | A | 0.0000 | |
| 85 | P | A | -0.9852 | |
| 86 | T | A | -0.7566 | |
| 87 | F | A | 0.0000 | |
| 88 | I | A | -0.8277 | |
| 89 | E | A | -1.6941 | |
| 90 | T | A | 0.0000 | |
| 91 | V | A | 0.0000 | |
| 92 | R | A | -1.5027 | |
| 93 | Y | A | -1.1700 | |
| 94 | W | A | 0.0000 | |
| 95 | Q | A | 0.0000 | |
| 96 | K | A | -2.5022 | |
| 97 | Q | A | -2.1287 | |
| 98 | S | A | -1.6012 | |
| 99 | G | A | -1.6777 | |
| 100 | V | A | 0.0000 | |
| 101 | G | A | -1.2975 | |
| 102 | A | A | -0.8412 | |
| 103 | N | A | -1.3031 | |
| 104 | A | A | 0.0000 | |
| 105 | T | A | 0.0000 | |
| 106 | A | A | 0.0000 | |
| 107 | L | A | 0.0000 | |
| 108 | I | A | 0.0000 | |
| 109 | G | A | 0.0000 | |
| 110 | F | A | 0.4363 | |
| 111 | S | A | 0.0000 | |
| 112 | Q | A | 0.0000 | |
| 113 | G | A | 0.0000 | |
| 114 | A | A | 0.0000 | |
| 115 | I | A | 0.0000 | |
| 116 | M | A | 0.0000 | |
| 117 | V | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | E | A | 0.0000 | |
| 120 | S | A | 0.0000 | |
| 121 | I | A | 0.0000 | |
| 122 | K | A | -0.7976 | |
| 123 | A | A | -0.7896 | |
| 124 | E | A | -0.9219 | |
| 125 | P | A | -0.7805 | |
| 126 | G | A | -0.7448 | |
| 127 | L | A | 0.0000 | |
| 128 | A | A | 0.0000 | |
| 129 | S | A | 0.0000 | |
| 130 | R | A | 0.0000 | |
| 131 | V | A | 0.0000 | |
| 132 | I | A | 0.0000 | |
| 133 | A | A | 0.0000 | |
| 134 | F | A | 0.0000 | |
| 135 | N | A | 0.0000 | |
| 136 | G | A | 0.0000 | |
| 137 | R | A | 0.0000 | |
| 138 | Y | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | S | A | -0.5444 | |
| 141 | L | A | 0.0679 | |
| 142 | P | A | 0.0000 | |
| 143 | E | A | -1.7221 | |
| 144 | T | A | -0.8122 | |
| 145 | A | A | -0.4271 | |
| 146 | S | A | -0.4680 | |
| 147 | T | A | -0.6395 | |
| 148 | A | A | -0.4381 | |
| 149 | T | A | 0.0000 | |
| 150 | T | A | 0.0000 | |
| 151 | I | A | 0.0000 | |
| 152 | H | A | 0.0000 | |
| 153 | L | A | 0.0000 | |
| 154 | I | A | 0.0000 | |
| 155 | H | A | 0.0000 | |
| 156 | G | A | 0.0000 | |
| 157 | G | A | -2.1243 | |
| 158 | E | A | -2.8396 | |
| 159 | D | A | 0.0000 | |
| 160 | P | A | -0.4321 | |
| 161 | V | A | 0.9288 | |
| 162 | I | A | 0.0000 | |
| 163 | D | A | -1.6635 | |
| 164 | L | A | -0.5896 | |
| 165 | A | A | -0.3830 | |
| 166 | H | A | -0.6330 | |
| 167 | A | A | 0.0000 | |
| 168 | V | A | -0.0295 | |
| 169 | A | A | -0.1048 | |
| 170 | A | A | 0.0000 | |
| 171 | Q | A | -0.2687 | |
| 172 | E | A | -1.0632 | |
| 173 | A | A | -0.5038 | |
| 174 | L | A | 0.0000 | |
| 175 | I | A | 1.1108 | |
| 176 | S | A | -0.1463 | |
| 177 | A | A | -0.4062 | |
| 178 | G | A | 0.1026 | |
| 179 | G | A | 0.0000 | |
| 180 | D | A | -0.0367 | |
| 181 | V | A | 0.1679 | |
| 182 | T | A | 0.3123 | |
| 183 | L | A | 0.3905 | |
| 184 | D | A | 0.3008 | |
| 185 | I | A | 0.3145 | |
| 186 | V | A | 0.0000 | |
| 187 | E | A | -2.9022 | |
| 188 | D | A | -3.1171 | |
| 189 | L | A | 0.0000 | |
| 190 | G | A | -1.5668 | |
| 191 | H | A | -0.3329 | |
| 192 | A | A | 0.1805 | |
| 193 | I | A | -0.1556 | |
| 194 | D | A | -1.1338 | |
| 195 | N | A | -1.7104 | |
| 196 | R | A | -1.4759 | |
| 197 | S | A | 0.0000 | |
| 198 | M | A | 0.0000 | |
| 199 | Q | A | -1.1814 | |
| 200 | F | A | -0.2611 | |
| 201 | A | A | 0.0000 | |
| 202 | L | A | 0.0000 | |
| 203 | D | A | -0.5459 | |
| 204 | H | A | -0.3246 | |
| 205 | L | A | 0.0000 | |
| 206 | R | A | -0.0006 | |
| 207 | Y | A | 0.5158 | |
| 208 | T | A | -0.3737 | |
| 209 | N | A | -1.0205 | mutated: IN209A |
| 210 | P | A | 0.0000 | |
| 211 | K | A | -1.0762 | |
| 212 | H | A | -0.8646 | |
| 213 | Y | A | 0.1026 | |
| 214 | F | A | 0.6508 | |
| 215 | D | A | -1.4412 | |
| 216 | E | A | -2.0258 | |
| 217 | A | A | -0.4688 | |
| 218 | L | A | 0.6421 | |
| 219 | S | A | -0.8182 | |
| 220 | G | A | -1.3781 | |
| 221 | G | A | -2.3836 | |
| 222 | K | A | -2.8915 | |
| 223 | P | A | -2.3716 | |
| 224 | G | A | -2.5283 | |
| 225 | D | A | -3.5340 | |
| 226 | D | A | -3.1354 | |
| 227 | D | A | -2.3917 | |
| 228 | V | A | 0.0489 | |
| 229 | I | A | 0.0282 | |
| 230 | E | A | -0.7286 | |
| 231 | M | A | 0.1801 | |
| 232 | M | A | 0.8867 |