| Chain sequence(s) |
A: MNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQNQGNMQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:16)
[INFO] Main: Simulation completed successfully. (00:00:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 311 | M | A | 0.8354 | |
| 312 | N | A | 0.0874 | |
| 313 | F | A | 1.5763 | |
| 314 | G | A | 1.1797 | |
| 315 | A | A | 1.4290 | |
| 316 | F | A | 2.3790 | |
| 317 | S | A | 1.5758 | |
| 318 | I | A | 1.7538 | |
| 319 | N | A | -0.0204 | |
| 320 | P | A | 0.1949 | |
| 321 | A | A | 0.4813 | |
| 322 | M | A | 1.1459 | |
| 323 | M | A | 0.9807 | |
| 324 | A | A | 0.4880 | |
| 325 | A | A | 0.5170 | |
| 326 | A | A | 0.5331 | |
| 327 | Q | A | 0.0314 | |
| 328 | A | A | 0.0948 | |
| 329 | A | A | 0.3474 | |
| 330 | L | A | 1.0773 | |
| 331 | Q | A | -0.0765 | |
| 332 | S | A | 0.2083 | |
| 333 | S | A | 0.5938 | |
| 334 | W | A | 1.3770 | |
| 335 | G | A | 0.7792 | |
| 336 | M | A | 1.5892 | |
| 337 | M | A | 1.5689 | |
| 338 | G | A | 0.6935 | |
| 339 | M | A | 1.0102 | |
| 340 | L | A | 0.3689 | |
| 341 | A | A | -0.5588 | |
| 342 | S | A | -0.9285 | |
| 343 | Q | A | -1.9863 | |
| 344 | Q | A | -2.8085 | |
| 345 | N | A | -2.7187 | |
| 346 | Q | A | -2.5991 | |
| 347 | S | A | -2.2639 | |
| 348 | G | A | -1.6498 | |
| 349 | P | A | -1.4884 | |
| 350 | S | A | -1.3442 | |
| 351 | G | A | -2.2290 | |
| 352 | N | A | -3.1878 | |
| 353 | N | A | -3.0958 | |
| 354 | Q | A | -3.5915 | |
| 355 | N | A | -3.1849 | |
| 356 | Q | A | -3.0768 | |
| 357 | G | A | -2.6557 | |
| 358 | N | A | -2.1556 | |
| 359 | M | A | -0.4648 | |
| 360 | Q | A | -1.3593 |