| Chain sequence(s) |
A: CVATRNSCKPPAPACCDPCASCYCRFFRSACYCRVLSLNC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:16)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 93 | C | A | 0.9576 | |
| 94 | V | A | 0.2236 | |
| 95 | A | A | -0.2885 | |
| 96 | T | A | -1.0383 | |
| 97 | R | A | -2.3898 | |
| 98 | N | A | -2.1196 | |
| 99 | S | A | -1.1814 | |
| 100 | C | A | -1.0329 | |
| 101 | K | A | -1.6576 | |
| 102 | P | A | -0.9870 | |
| 103 | P | A | -0.8148 | |
| 104 | A | A | -0.5694 | |
| 105 | P | A | -0.4339 | |
| 106 | A | A | -0.5731 | |
| 107 | C | A | 0.0000 | |
| 108 | C | A | 0.1799 | |
| 109 | D | A | -0.8955 | |
| 110 | P | A | -0.5928 | |
| 111 | C | A | 0.1106 | |
| 112 | A | A | 0.1689 | |
| 113 | S | A | -0.0224 | |
| 114 | C | A | -0.4128 | |
| 115 | Y | A | 0.9504 | |
| 116 | C | A | 0.2708 | |
| 117 | R | A | -0.3024 | |
| 118 | F | A | 1.5370 | |
| 119 | F | A | 1.5667 | |
| 120 | R | A | -0.5705 | |
| 121 | S | A | -0.0053 | |
| 122 | A | A | -0.2638 | |
| 123 | C | A | -0.1060 | |
| 124 | Y | A | -0.9856 | |
| 125 | C | A | 0.0000 | |
| 126 | R | A | -0.3173 | |
| 127 | V | A | 1.0371 | |
| 128 | L | A | 1.2211 | |
| 129 | S | A | 1.0069 | |
| 130 | L | A | 1.3724 | |
| 131 | N | A | -0.0289 | |
| 132 | C | A | 0.5717 |