| Chain sequence(s) |
A: IVIVKGHE
C: IVIVKGHE B: IVIVKGHE E: IVIVKGHE D: IVIVKGHE G: IVIVKGHE F: IVIVKGHE I: IVIVKGHE H: IVIVKGHE K: IVIVKGHE J: IVIVKGHE M: IVIVKGHE L: IVIVKGHE O: IVIVKGHE N: IVIVKGHE Q: IVIVKGHE P: IVIVKGHE S: IVIVKGHEIVIVKGHE R: IVIVKGHE input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:44)
[INFO] Main: Simulation completed successfully. (00:04:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 4.4283 | |
| 2 | V | A | 4.6308 | |
| 3 | I | A | 3.5849 | |
| 4 | V | A | 1.7857 | |
| 5 | K | A | -1.4485 | |
| 6 | G | A | -1.7891 | |
| 7 | H | A | -2.6493 | |
| 8 | E | A | -2.6473 | |
| 1 | I | B | 5.5063 | |
| 2 | V | B | 4.8449 | |
| 3 | I | B | 3.4846 | |
| 4 | V | B | 2.1466 | |
| 5 | K | B | -1.4817 | |
| 6 | G | B | -2.3369 | |
| 7 | H | B | -2.5577 | |
| 8 | E | B | -3.1381 | |
| 1 | I | C | 3.4704 | |
| 2 | V | C | 2.9521 | |
| 3 | I | C | 2.2440 | |
| 4 | V | C | 0.5863 | |
| 5 | K | C | -1.7088 | |
| 6 | G | C | -2.3105 | |
| 7 | H | C | -2.8562 | |
| 8 | E | C | -2.7948 | |
| 1 | I | D | 3.5821 | |
| 2 | V | D | 0.0000 | |
| 3 | I | D | 2.0288 | |
| 4 | V | D | 0.5306 | |
| 5 | K | D | -1.7081 | |
| 6 | G | D | -2.0424 | |
| 7 | H | D | -3.1888 | |
| 8 | E | D | -2.9352 | |
| 1 | I | E | 3.5078 | |
| 2 | V | E | 2.7726 | |
| 3 | I | E | 1.8097 | |
| 4 | V | E | 0.3353 | |
| 5 | K | E | -2.3742 | |
| 6 | G | E | -2.4055 | |
| 7 | H | E | -3.3208 | |
| 8 | E | E | -2.8349 | |
| 1 | I | F | 0.0000 | |
| 2 | V | F | 2.6137 | |
| 3 | I | F | 1.1211 | |
| 4 | V | F | -0.0346 | |
| 5 | K | F | -2.5967 | |
| 6 | G | F | -2.7425 | |
| 7 | H | F | -3.4514 | |
| 8 | E | F | -3.0865 | |
| 1 | I | G | 2.9604 | |
| 2 | V | G | 0.0000 | |
| 3 | I | G | 1.1680 | |
| 4 | V | G | -0.0224 | |
| 5 | K | G | -2.5265 | |
| 6 | G | G | -2.6871 | |
| 7 | H | G | -3.4737 | |
| 8 | E | G | -3.3441 | |
| 1 | I | H | 2.9341 | |
| 2 | V | H | 0.0000 | |
| 3 | I | H | 1.2391 | |
| 4 | V | H | -0.0339 | |
| 5 | K | H | -2.4315 | |
| 6 | G | H | -2.6836 | |
| 7 | H | H | -3.1014 | |
| 8 | E | H | -3.0611 | |
| 1 | I | I | 0.0000 | |
| 2 | V | I | 2.3103 | |
| 3 | I | I | 0.0000 | |
| 4 | V | I | 0.0813 | |
| 5 | K | I | -2.6670 | |
| 6 | G | I | -2.7298 | |
| 7 | H | I | -3.6280 | |
| 8 | E | I | -3.2729 | |
| 1 | I | J | 2.8178 | |
| 2 | V | J | 0.0000 | |
| 3 | I | J | 1.2328 | |
| 4 | V | J | 0.3503 | |
| 5 | K | J | -2.3033 | |
| 6 | G | J | -2.7738 | |
| 7 | H | J | -3.4084 | |
| 8 | E | J | -3.3118 | |
| 1 | I | K | 2.6280 | |
| 2 | V | K | 2.4764 | |
| 3 | I | K | 0.0000 | |
| 4 | V | K | 0.4352 | |
| 5 | K | K | -2.4187 | |
| 6 | G | K | -2.5256 | |
| 7 | H | K | -3.3003 | |
| 8 | E | K | -3.0814 | |
| 1 | I | L | 2.8704 | |
| 2 | V | L | 0.0000 | |
| 3 | I | L | 1.7595 | |
| 4 | V | L | 0.6385 | |
| 5 | K | L | -1.6888 | |
| 6 | G | L | -1.9870 | |
| 7 | H | L | -3.1336 | |
| 8 | E | L | -3.0685 | |
| 1 | I | M | 2.8314 | |
| 2 | V | M | 3.0404 | |
| 3 | I | M | 0.0000 | |
| 4 | V | M | 0.6321 | |
| 5 | K | M | -1.7131 | |
| 6 | G | M | -2.3893 | |
| 7 | H | M | -3.3613 | |
| 8 | E | M | -2.9513 | |
| 1 | I | N | 2.9375 | |
| 2 | V | N | 0.0000 | |
| 3 | I | N | 1.6738 | |
| 4 | V | N | 0.0000 | |
| 5 | K | N | -2.0022 | |
| 6 | G | N | -2.1261 | |
| 7 | H | N | -2.7953 | |
| 8 | E | N | -3.2437 | |
| 1 | I | O | 2.9367 | |
| 2 | V | O | 0.0000 | |
| 3 | I | O | 1.6970 | |
| 4 | V | O | 1.6572 | |
| 5 | K | O | -1.4487 | |
| 6 | G | O | -1.9558 | |
| 7 | H | O | -3.3385 | |
| 8 | E | O | -3.0613 | |
| 1 | I | P | 2.6910 | |
| 2 | V | P | 0.0000 | |
| 3 | I | P | 1.9355 | |
| 4 | V | P | 1.1913 | |
| 5 | K | P | -1.7240 | |
| 6 | G | P | -2.3789 | |
| 7 | H | P | -2.9880 | |
| 8 | E | P | -3.3689 | |
| 1 | I | Q | 3.3737 | |
| 2 | V | Q | 3.1971 | |
| 3 | I | Q | 2.2936 | |
| 4 | V | Q | 0.8922 | |
| 5 | K | Q | -2.1715 | |
| 6 | G | Q | -2.9952 | |
| 7 | H | Q | -3.7235 | |
| 8 | E | Q | -3.4561 | |
| 1 | I | R | 3.6564 | |
| 2 | V | R | 0.0000 | |
| 3 | I | R | 2.0885 | |
| 4 | V | R | 1.4784 | |
| 5 | K | R | -2.4583 | |
| 6 | G | R | -2.5947 | |
| 7 | H | R | -2.8776 | |
| 8 | E | R | -3.4160 | |
| 1 | I | S | 5.0304 | |
| 2 | V | S | 5.1972 | |
| 3 | I | S | 3.6884 | |
| 4 | V | S | 2.2315 | |
| 5 | K | S | -0.8583 | |
| 6 | G | S | -1.3234 | |
| 7 | H | S | -1.3174 | |
| 8 | E | S | -0.5833 | |
| 9 | I | S | 2.7200 | |
| 10 | V | S | 3.6300 | |
| 11 | I | S | 3.5293 | |
| 12 | V | S | 2.7698 | |
| 13 | K | S | -0.8944 | |
| 14 | G | S | -2.0209 | |
| 15 | H | S | -2.6715 | |
| 16 | E | S | -3.2441 |