Project name: IVIVKGHE20

Status: done

Started: 2026-02-13 10:25:35
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Chain sequence(s) A: IVIVKGHE
C: IVIVKGHE
B: IVIVKGHE
E: IVIVKGHE
D: IVIVKGHE
G: IVIVKGHE
F: IVIVKGHE
I: IVIVKGHE
H: IVIVKGHE
K: IVIVKGHE
J: IVIVKGHE
M: IVIVKGHE
L: IVIVKGHE
O: IVIVKGHE
N: IVIVKGHE
Q: IVIVKGHE
P: IVIVKGHE
S: IVIVKGHEIVIVKGHE
R: IVIVKGHE
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:49)
Show buried residues

Minimal score value
-3.7235
Maximal score value
5.5063
Average score
-0.3356
Total score value
-53.6882

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 4.4283
2 V A 4.6308
3 I A 3.5849
4 V A 1.7857
5 K A -1.4485
6 G A -1.7891
7 H A -2.6493
8 E A -2.6473
1 I B 5.5063
2 V B 4.8449
3 I B 3.4846
4 V B 2.1466
5 K B -1.4817
6 G B -2.3369
7 H B -2.5577
8 E B -3.1381
1 I C 3.4704
2 V C 2.9521
3 I C 2.2440
4 V C 0.5863
5 K C -1.7088
6 G C -2.3105
7 H C -2.8562
8 E C -2.7948
1 I D 3.5821
2 V D 0.0000
3 I D 2.0288
4 V D 0.5306
5 K D -1.7081
6 G D -2.0424
7 H D -3.1888
8 E D -2.9352
1 I E 3.5078
2 V E 2.7726
3 I E 1.8097
4 V E 0.3353
5 K E -2.3742
6 G E -2.4055
7 H E -3.3208
8 E E -2.8349
1 I F 0.0000
2 V F 2.6137
3 I F 1.1211
4 V F -0.0346
5 K F -2.5967
6 G F -2.7425
7 H F -3.4514
8 E F -3.0865
1 I G 2.9604
2 V G 0.0000
3 I G 1.1680
4 V G -0.0224
5 K G -2.5265
6 G G -2.6871
7 H G -3.4737
8 E G -3.3441
1 I H 2.9341
2 V H 0.0000
3 I H 1.2391
4 V H -0.0339
5 K H -2.4315
6 G H -2.6836
7 H H -3.1014
8 E H -3.0611
1 I I 0.0000
2 V I 2.3103
3 I I 0.0000
4 V I 0.0813
5 K I -2.6670
6 G I -2.7298
7 H I -3.6280
8 E I -3.2729
1 I J 2.8178
2 V J 0.0000
3 I J 1.2328
4 V J 0.3503
5 K J -2.3033
6 G J -2.7738
7 H J -3.4084
8 E J -3.3118
1 I K 2.6280
2 V K 2.4764
3 I K 0.0000
4 V K 0.4352
5 K K -2.4187
6 G K -2.5256
7 H K -3.3003
8 E K -3.0814
1 I L 2.8704
2 V L 0.0000
3 I L 1.7595
4 V L 0.6385
5 K L -1.6888
6 G L -1.9870
7 H L -3.1336
8 E L -3.0685
1 I M 2.8314
2 V M 3.0404
3 I M 0.0000
4 V M 0.6321
5 K M -1.7131
6 G M -2.3893
7 H M -3.3613
8 E M -2.9513
1 I N 2.9375
2 V N 0.0000
3 I N 1.6738
4 V N 0.0000
5 K N -2.0022
6 G N -2.1261
7 H N -2.7953
8 E N -3.2437
1 I O 2.9367
2 V O 0.0000
3 I O 1.6970
4 V O 1.6572
5 K O -1.4487
6 G O -1.9558
7 H O -3.3385
8 E O -3.0613
1 I P 2.6910
2 V P 0.0000
3 I P 1.9355
4 V P 1.1913
5 K P -1.7240
6 G P -2.3789
7 H P -2.9880
8 E P -3.3689
1 I Q 3.3737
2 V Q 3.1971
3 I Q 2.2936
4 V Q 0.8922
5 K Q -2.1715
6 G Q -2.9952
7 H Q -3.7235
8 E Q -3.4561
1 I R 3.6564
2 V R 0.0000
3 I R 2.0885
4 V R 1.4784
5 K R -2.4583
6 G R -2.5947
7 H R -2.8776
8 E R -3.4160
1 I S 5.0304
2 V S 5.1972
3 I S 3.6884
4 V S 2.2315
5 K S -0.8583
6 G S -1.3234
7 H S -1.3174
8 E S -0.5833
9 I S 2.7200
10 V S 3.6300
11 I S 3.5293
12 V S 2.7698
13 K S -0.8944
14 G S -2.0209
15 H S -2.6715
16 E S -3.2441
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Laboratory of Theory of Biopolymers 2018