Project name: query_structure

Status: done

Started: 2026-03-17 01:11:44
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGGLRQMLGSKPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:40)
Show buried residues

Minimal score value
-3.3891
Maximal score value
1.6144
Average score
-0.7285
Total score value
-68.4824

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6144
2 S A 0.0411
3 D A -0.4783
4 V A -0.9636
5 P A 0.0000
6 R A -3.1336
7 D A -3.3891
8 L A 0.0000
9 E A -2.0987
10 V A 0.1276
11 V A 1.5622
12 A A 0.9207
13 A A 0.3386
14 T A -0.5229
15 P A -1.1236
16 T A -0.9990
17 S A -0.5196
18 L A 0.0000
19 L A 0.8026
20 I A 0.0000
21 S A -1.1255
22 W A 0.0000
23 D A -3.2227
24 A A -1.6681
25 P A 0.0000
26 A A 0.1457
27 V A 0.2685
28 T A -0.4983
29 V A -1.0804
30 R A -1.8565
31 Y A -1.2407
32 Y A 0.0000
33 R A -0.9868
34 I A 0.0000
35 T A -0.6609
36 Y A -0.4177
37 G A 0.0000
38 E A -1.5894
39 T A -1.2482
40 G A -1.2396
41 G A -1.4175
42 N A -1.5436
43 S A -0.8905
44 P A -0.4109
45 V A 0.2700
46 Q A -1.1926
47 E A -1.8392
48 F A -0.7814
49 T A -0.3854
50 V A 0.0000
51 P A -1.2516
52 G A -1.4770
53 S A -1.4200
54 K A -2.0801
55 S A -1.4475
56 T A -0.7755
57 A A 0.0000
58 T A 0.2588
59 I A 0.0000
60 S A -0.6546
61 G A -1.0275
62 L A 0.0000
63 K A -2.3716
64 P A -1.6634
65 G A -1.4467
66 V A -1.4092
67 D A -2.1009
68 Y A 0.0000
69 T A -0.7703
70 I A 0.0000
71 T A 0.0000
72 V A 0.0000
73 Y A -0.5017
74 A A 0.0000
75 V A 0.0000
76 T A -0.5101
77 G A -0.7568
78 G A -0.5530
79 L A 0.2239
80 R A -1.4892
81 Q A -0.9933
82 M A 0.4843
83 L A 0.7238
84 G A -0.1489
85 S A -0.5926
86 K A -1.6807
87 P A -1.0918
88 I A -0.6318
89 S A -0.8477
90 I A -0.7328
91 N A -1.7197
92 Y A -1.4456
93 R A -2.5194
94 T A -1.6293
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Laboratory of Theory of Biopolymers 2018