Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYTMSWVRQAPGKGLEWVATISGGGFGTYYPDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARPGYNNYYFDIWGQGTTVTVSS
L: EIVLTQSPATLSLSPGERATLSCHASDSISNSLHWYQQKPGQAPRLLIYYARQSIQGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQSESWPLHFGGGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:32) [INFO] Main: Simulation completed successfully. (00:01:34) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | E | H | -1.9070 | |
2 | V | H | -0.7485 | |
3 | Q | H | -0.9462 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.8738 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.3829 | |
8 | G | H | -0.7722 | |
9 | G | H | -0.2622 | |
11 | G | H | 0.4099 | |
12 | L | H | 1.1901 | |
13 | V | H | -0.0031 | |
14 | Q | H | -1.3061 | |
15 | P | H | -1.6381 | |
16 | G | H | -1.4943 | |
17 | G | H | -1.2344 | |
18 | S | H | -1.2019 | |
19 | L | H | -0.6434 | |
20 | R | H | -1.2598 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.2382 | |
23 | C | H | 0.0000 | |
24 | A | H | -0.1788 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.7591 | |
27 | G | H | -1.0308 | |
28 | F | H | -0.4099 | |
29 | T | H | -0.2272 | |
30 | F | H | 0.0000 | |
35 | S | H | -0.8332 | |
36 | S | H | -0.3212 | |
37 | Y | H | -0.0373 | |
38 | T | H | -0.1996 | |
39 | M | H | 0.0000 | |
40 | S | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.8142 | |
45 | A | H | -1.2158 | |
46 | P | H | -0.9847 | |
47 | G | H | -1.4597 | |
48 | K | H | -2.2813 | |
49 | G | H | -1.4094 | |
50 | L | H | 0.0000 | |
51 | E | H | -1.0067 | |
52 | W | H | 0.0000 | |
53 | V | H | 0.0000 | |
54 | A | H | 0.0000 | |
55 | T | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | S | H | 0.0913 | |
58 | G | H | -0.3171 | |
59 | G | H | -0.1560 | |
62 | G | H | 0.3697 | |
63 | F | H | 1.6677 | |
64 | G | H | 0.8326 | |
65 | T | H | 0.6595 | |
66 | Y | H | 0.2680 | |
67 | Y | H | -0.4944 | |
68 | P | H | -1.4021 | |
69 | D | H | -2.3865 | |
70 | S | H | -1.6678 | |
71 | V | H | 0.0000 | |
72 | K | H | -2.3132 | |
74 | G | H | -1.7044 | |
75 | R | H | -1.5523 | |
76 | F | H | 0.0000 | |
77 | T | H | -0.7142 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.1021 | |
80 | R | H | -0.7516 | |
81 | D | H | -1.4602 | |
82 | N | H | -1.6463 | |
83 | A | H | -1.3360 | |
84 | K | H | -2.2776 | |
85 | N | H | -1.7610 | |
86 | S | H | -1.0312 | |
87 | L | H | 0.0000 | |
88 | Y | H | -0.3358 | |
89 | L | H | 0.0000 | |
90 | Q | H | -0.9304 | |
91 | M | H | 0.0000 | |
92 | N | H | -1.6908 | |
93 | S | H | -1.4390 | |
94 | L | H | 0.0000 | |
95 | R | H | -2.2000 | |
96 | A | H | -1.6351 | |
97 | E | H | -2.1903 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.5942 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.1636 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | P | H | 0.0000 | |
108 | G | H | 0.0000 | |
109 | Y | H | 0.6258 | |
110 | N | H | -0.6802 | |
112 | N | H | -0.4856 | |
113 | Y | H | -0.1455 | |
114 | Y | H | 0.0000 | |
115 | F | H | 0.0000 | |
116 | D | H | -0.1887 | |
117 | I | H | -0.0454 | |
118 | W | H | -0.2940 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.1915 | |
121 | G | H | -0.4886 | |
122 | T | H | -0.1913 | |
123 | T | H | 0.1037 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.0005 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.6965 | |
128 | S | H | -0.5571 | |
1 | E | L | -1.4778 | |
2 | I | L | -0.5601 | |
3 | V | L | 0.8496 | |
4 | L | L | 0.0000 | |
5 | T | L | -0.2483 | |
6 | Q | L | -0.5331 | |
7 | S | L | -0.5267 | |
8 | P | L | -0.4098 | |
9 | A | L | -0.3708 | |
10 | T | L | -0.4393 | |
11 | L | L | -0.0991 | |
12 | S | L | -0.1884 | |
13 | L | L | -0.5475 | |
14 | S | L | -0.9026 | |
15 | P | L | -1.3328 | |
16 | G | L | -1.7169 | |
17 | E | L | -2.4631 | |
18 | R | L | -2.6185 | |
19 | A | L | 0.0000 | |
20 | T | L | -0.6785 | |
21 | L | L | 0.0000 | |
22 | S | L | -0.7040 | |
23 | C | L | 0.0000 | |
24 | H | L | -1.4511 | |
25 | A | L | 0.0000 | |
26 | S | L | -1.0540 | |
27 | D | L | -2.1565 | |
28 | S | L | -1.8502 | |
29 | I | L | 0.0000 | |
36 | S | L | -1.3354 | |
37 | N | L | -1.5984 | |
38 | S | L | 0.0000 | |
39 | L | L | 0.0000 | |
40 | H | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.2364 | |
46 | P | L | -0.8818 | |
47 | G | L | -1.3290 | |
48 | Q | L | -1.8858 | |
49 | A | L | -1.2567 | |
50 | P | L | 0.0000 | |
51 | R | L | -1.3978 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.3771 | |
56 | Y | L | -0.8181 | |
57 | A | L | 0.0000 | |
65 | R | L | -2.2986 | |
66 | Q | L | -1.6064 | |
67 | S | L | -0.9925 | |
68 | I | L | -0.6685 | |
69 | Q | L | -1.2880 | |
70 | G | L | -0.8847 | |
71 | I | L | -0.5364 | |
72 | P | L | -0.3200 | |
74 | A | L | -0.3050 | |
75 | R | L | -0.6661 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.8036 | |
78 | G | L | -1.0843 | |
79 | S | L | -1.4086 | |
80 | G | L | -1.4174 | |
83 | S | L | -1.3964 | |
84 | G | L | -1.4459 | |
85 | T | L | -1.9358 | |
86 | D | L | -2.5143 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.9185 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.6327 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.3192 | |
93 | S | L | -1.6190 | |
94 | L | L | 0.0000 | |
95 | E | L | -1.9293 | |
96 | P | L | -1.1708 | |
97 | E | L | -1.9079 | |
98 | D | L | 0.0000 | |
99 | F | L | -0.2432 | |
100 | A | L | 0.0000 | |
101 | V | L | -0.1447 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | S | L | 0.0000 | |
108 | E | L | -1.8357 | |
109 | S | L | -0.9862 | |
114 | W | L | -0.2033 | |
115 | P | L | -0.6605 | |
116 | L | L | 0.0000 | |
117 | H | L | -0.1736 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.8109 | |
121 | G | L | -0.7273 | |
122 | T | L | 0.0000 | |
123 | K | L | -0.8107 | |
124 | V | L | 0.0000 | |
125 | E | L | 0.0140 | |
126 | I | L | 0.9125 | |
127 | K | L | -0.9032 |