Project name: 22-5.pdb

Status: done

Started: 2026-03-19 06:04:58
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Chain sequence(s) H: QVQLVESGGGLVQPGGSLRLSCAASGSISSHNDMSWYRQAPGKQLELVSFIASGGSTYYADSVKGRFTISRDHAKNTLYLQMNSLRAEDTAVYYCNSRTYDGEKTYWGQGTTVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:02)
Show buried residues

Minimal score value
-2.7639
Maximal score value
1.1879
Average score
-0.6511
Total score value
-76.1832

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5376
2 V H -0.9590
3 Q H -1.1808
4 L H 0.0000
5 V H 0.6703
6 E H 0.0000
7 S H -0.4626
8 G H -1.0218
9 G H -0.3740
11 G H 0.2823
12 L H 1.1879
13 V H -0.0164
14 Q H -1.3541
15 P H -1.4125
16 G H -1.4223
17 G H -0.9539
18 S H -0.9853
19 L H -0.7913
20 R H -1.9306
21 L H 0.0000
22 S H -0.3862
23 C H 0.0000
24 A H -0.1602
25 A H -0.4597
26 S H -0.6864
27 G H -0.7835
28 S H -0.8065
29 I H 0.0000
30 S H -1.2114
35 S H -1.1141
36 H H -1.3657
37 N H -1.0430
38 D H -0.9492
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 Y H 0.6032
43 R H 0.0000
44 Q H -0.6660
45 A H 0.0000
46 P H -0.8517
47 G H -1.2027
48 K H -1.6287
49 Q H -1.4934
50 L H -0.1327
51 E H -0.3177
52 L H 0.5210
53 V H 0.0000
54 S H 0.0000
55 F H 0.6807
56 I H 0.0000
57 A H -0.6964
58 S H -1.2674
59 G H -1.0382
63 G H -0.6324
64 S H -0.2625
65 T H 0.4190
66 Y H 1.0599
67 Y H -0.0184
68 A H -0.8410
69 D H -2.2829
70 S H -1.7138
71 V H 0.0000
72 K H -2.3632
74 G H -1.6867
75 R H -1.5790
76 F H 0.0000
77 T H -0.6375
78 I H 0.0000
79 S H -0.4112
80 R H -0.9333
81 D H -1.3213
82 H H -1.5769
83 A H -1.2657
84 K H -2.1086
85 N H -1.5281
86 T H -0.8492
87 L H 0.0000
88 Y H -0.4986
89 L H 0.0000
90 Q H -1.2034
91 M H 0.0000
92 N H -1.3159
93 S H -1.2021
94 L H 0.0000
95 R H -2.1744
96 A H -1.6368
97 E H -2.1679
98 D H 0.0000
99 T H -0.6341
100 A H 0.0000
101 V H 0.2725
102 Y H 0.0000
103 Y H 0.4945
104 C H 0.0000
105 N H 0.0000
106 S H 0.0000
107 R H -1.3769
108 T H -1.2886
109 Y H -0.9933
110 D H -2.1775
113 G H -2.2082
114 E H -2.7639
115 K H -2.3730
116 T H -1.0234
117 Y H -0.5817
118 W H 0.1935
119 G H -0.1658
120 Q H -0.8695
121 G H 0.0000
122 T H -0.1439
123 T H 0.0287
124 V H 0.0000
125 T H 0.0216
126 V H 0.0000
127 S H -0.5725
128 S H -0.5722
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Laboratory of Theory of Biopolymers 2018