Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
Selected Chain(s) | C |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | DI62C,EA1C,KF76C,QA39C,KG43C |
Energy difference between WT (input) and mutated protein (by FoldX) | 2.70678 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:24) [INFO] FoldX: Starting FoldX energy minimalization (00:01:15) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:34) [INFO] Main: Simulation completed successfully. (00:01:35) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | C | -0.1055 | mutated: EA1C |
2 | V | C | 0.0051 | |
3 | Q | C | -0.8348 | |
4 | L | C | 0.0000 | |
5 | V | C | 0.5485 | |
6 | E | C | 0.2188 | |
7 | S | C | -0.4030 | |
8 | G | C | -0.8088 | |
9 | G | C | 0.0306 | |
10 | G | C | 0.9389 | |
11 | L | C | 1.4406 | |
12 | V | C | -0.0385 | |
13 | Q | C | -1.3371 | |
14 | P | C | -1.4887 | |
15 | G | C | -1.4134 | |
16 | G | C | -0.9785 | |
17 | S | C | -1.2309 | |
18 | L | C | -0.9630 | |
19 | R | C | -2.1331 | |
20 | L | C | 0.0000 | |
21 | S | C | -0.5191 | |
22 | C | C | 0.0000 | |
23 | A | C | 0.3829 | |
24 | A | C | 0.0000 | |
25 | S | C | 0.0537 | |
26 | D | C | 0.0000 | |
27 | F | C | 1.5479 | |
28 | T | C | 0.2540 | |
29 | F | C | 0.0000 | |
30 | R | C | -2.0069 | |
31 | S | C | -0.8867 | |
32 | Y | C | -1.2168 | |
33 | E | C | -1.1447 | |
34 | M | C | 0.0000 | |
35 | S | C | 0.0000 | |
36 | W | C | 0.0000 | |
37 | V | C | 0.0000 | |
38 | R | C | 0.0000 | |
39 | A | C | 0.4794 | mutated: QA39C |
40 | A | C | -0.3291 | |
41 | P | C | -0.7806 | |
42 | G | C | -0.7712 | |
43 | G | C | -0.8006 | mutated: KG43C |
44 | G | C | -0.3622 | |
45 | L | C | 0.8082 | |
46 | E | C | -0.1213 | |
47 | W | C | 0.3872 | |
48 | V | C | 0.0000 | |
49 | S | C | 0.0000 | |
50 | A | C | 0.0000 | |
51 | I | C | 0.0000 | |
52 | S | C | -0.5842 | |
53 | G | C | -1.2262 | |
54 | S | C | -1.2016 | |
55 | G | C | -1.0537 | |
56 | G | C | -0.7345 | |
57 | S | C | -0.3027 | |
58 | T | C | 0.1987 | |
59 | Y | C | 1.0204 | |
60 | Y | C | 0.5807 | |
61 | A | C | 0.6940 | |
62 | I | C | 1.4601 | mutated: DI62C |
63 | S | C | 0.1130 | |
64 | V | C | 0.0000 | |
65 | K | C | -1.1132 | |
66 | G | C | -1.1094 | |
67 | R | C | 0.0000 | |
68 | F | C | 0.0000 | |
69 | T | C | -0.6626 | |
70 | I | C | 0.0000 | |
71 | S | C | -0.5028 | |
72 | R | C | -0.7525 | |
73 | D | C | -0.6406 | |
74 | N | C | -0.9276 | |
75 | S | C | 0.0022 | |
76 | F | C | 1.3843 | mutated: KF76C |
77 | N | C | 0.1374 | |
78 | T | C | 0.0000 | |
79 | L | C | 0.0000 | |
80 | Y | C | -0.5801 | |
81 | L | C | 0.0000 | |
82 | Q | C | -1.2190 | |
83 | M | C | 0.0000 | |
84 | N | C | -1.3327 | |
85 | S | C | -1.2322 | |
86 | L | C | 0.0000 | |
87 | R | C | -2.4721 | |
88 | A | C | -1.8894 | |
89 | E | C | -2.3409 | |
90 | D | C | 0.0000 | |
91 | T | C | -0.3247 | |
92 | A | C | 0.0000 | |
93 | I | C | 1.3778 | |
94 | Y | C | 0.0000 | |
95 | Y | C | 0.7387 | |
96 | C | C | 0.0000 | |
97 | A | C | 0.0000 | |
98 | R | C | 0.0000 | |
99 | L | C | 0.0000 | |
100 | R | C | -3.1644 | |
101 | D | C | -3.3298 | |
102 | G | C | -2.0850 | |
103 | F | C | -1.2304 | |
104 | N | C | -2.4263 | |
105 | K | C | -3.1795 | |
106 | G | C | -1.8834 | |
107 | F | C | -0.9554 | |
108 | D | C | -0.8739 | |
109 | Y | C | 0.1082 | |
110 | W | C | 0.4794 | |
111 | G | C | -0.1089 | |
112 | Q | C | -0.8904 | |
113 | G | C | 0.1885 | |
114 | T | C | 0.6360 | |
115 | L | C | 1.8862 | |
116 | V | C | 0.0000 | |
117 | T | C | 0.3603 | |
118 | V | C | 0.0000 | |
119 | S | C | -0.7749 | |
120 | S | C | -1.0602 |