| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGKYASNPMGWFRQAPGKGRELVAAILGGDGGSTYYPDSVEGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAAAATLKGDDLASRLAALRDVSNWDFWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:30)
[INFO] Main: Simulation completed successfully. (00:01:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.7079 | |
| 2 | V | A | -2.0860 | |
| 3 | Q | A | -1.5131 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.7121 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.5879 | |
| 8 | G | A | -0.8419 | |
| 9 | G | A | -0.7355 | |
| 10 | G | A | -0.0685 | |
| 11 | L | A | 0.8949 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.3481 | |
| 14 | P | A | -1.5147 | |
| 15 | G | A | -1.3723 | |
| 16 | G | A | -0.9473 | |
| 17 | S | A | -1.1809 | |
| 18 | L | A | -0.8171 | |
| 19 | R | A | -1.6909 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.2702 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.4525 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.7835 | |
| 26 | G | A | -2.3322 | |
| 27 | K | A | -2.4946 | |
| 28 | Y | A | 0.0000 | |
| 29 | A | A | -1.3922 | |
| 30 | S | A | -0.8971 | |
| 31 | N | A | -0.4398 | |
| 32 | P | A | 0.0000 | |
| 33 | M | A | 0.0000 | |
| 34 | G | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | F | A | 0.0000 | |
| 37 | R | A | 0.0000 | |
| 38 | Q | A | -1.6474 | |
| 39 | A | A | -1.6231 | |
| 40 | P | A | -1.1727 | |
| 41 | G | A | -1.6396 | |
| 42 | K | A | -2.6652 | |
| 43 | G | A | -2.1050 | |
| 44 | R | A | -2.2571 | |
| 45 | E | A | -2.4916 | |
| 46 | L | A | 0.0000 | |
| 47 | V | A | 0.0000 | |
| 48 | A | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | I | A | 0.0000 | |
| 51 | L | A | -0.2292 | |
| 52 | G | A | -0.7466 | |
| 53 | G | A | -1.4548 | |
| 54 | D | A | -2.3839 | |
| 55 | G | A | -1.5644 | |
| 56 | G | A | -1.0800 | |
| 57 | S | A | -0.5331 | |
| 58 | T | A | -0.0500 | |
| 59 | Y | A | -0.2975 | |
| 60 | Y | A | -0.8958 | |
| 61 | P | A | -1.7803 | |
| 62 | D | A | -2.5697 | |
| 63 | S | A | -1.8544 | |
| 64 | V | A | 0.0000 | |
| 65 | E | A | -2.7361 | |
| 66 | G | A | -1.8761 | |
| 67 | R | A | -1.6072 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.8147 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.6982 | |
| 72 | R | A | 0.0000 | |
| 73 | D | A | -2.1813 | |
| 74 | N | A | -2.2555 | |
| 75 | A | A | -1.8302 | |
| 76 | K | A | -2.7763 | |
| 77 | R | A | -2.8937 | |
| 78 | M | A | -1.3570 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.4019 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.0663 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.3623 | |
| 85 | S | A | -1.2031 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.1415 | |
| 88 | A | A | -1.6790 | |
| 89 | E | A | -2.1995 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.8426 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.4615 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.2864 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | A | A | -0.8824 | |
| 101 | T | A | -0.4073 | |
| 102 | L | A | -0.6374 | |
| 103 | K | A | -1.7995 | |
| 104 | G | A | -2.2934 | |
| 105 | D | A | -2.9466 | |
| 106 | D | A | -2.3937 | |
| 107 | L | A | -0.0963 | |
| 108 | A | A | -0.3375 | |
| 109 | S | A | -1.5211 | |
| 110 | R | A | -1.9547 | |
| 111 | L | A | -0.6757 | |
| 112 | A | A | -0.9406 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | 0.0000 | |
| 115 | R | A | -2.5942 | |
| 116 | D | A | -1.8785 | |
| 117 | V | A | -1.0208 | |
| 118 | S | A | -0.8247 | |
| 119 | N | A | -1.1452 | |
| 120 | W | A | 0.0000 | |
| 121 | D | A | -1.6829 | |
| 122 | F | A | -0.9682 | |
| 123 | W | A | -0.2336 | |
| 124 | G | A | -0.1927 | |
| 125 | Q | A | -0.7876 | |
| 126 | G | A | -0.5595 | |
| 127 | T | A | 0.0000 | |
| 128 | Q | A | -0.9970 | |
| 129 | V | A | 0.0000 | |
| 130 | T | A | -0.3576 | |
| 131 | V | A | 0.0000 | |
| 132 | S | A | -0.7632 | |
| 133 | S | A | -0.5820 |