Project name: query_structure

Status: done

Started: 2026-03-17 00:52:31
Settings
Chain sequence(s) A: QVQLVESGGGLVQPGGSLRLSCAASGYFYSSNYCLGWFRQAPGKEREGVAQINIAPGRIYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASTAGNMYYGLRGPADFDYWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:44)
Show buried residues

Minimal score value
-3.3393
Maximal score value
2.2547
Average score
-0.6002
Total score value
-76.2202

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -0.9964
2 V A 0.3281
3 Q A -0.4320
4 L A 0.0000
5 V A 0.7032
6 E A 0.0000
7 S A -0.5617
8 G A -1.0200
9 G A -0.7646
10 G A -0.0331
11 L A 1.0184
12 V A -0.0597
13 Q A -1.3953
14 P A -1.8093
15 G A -1.6015
16 G A -1.1092
17 S A -1.5148
18 L A -1.1060
19 R A -2.3144
20 L A 0.0000
21 S A -0.4759
22 C A 0.0000
23 A A -0.2832
24 A A -0.0007
25 S A -0.1254
26 G A 0.1524
27 Y A 1.0433
28 F A 0.0000
29 Y A 0.0000
30 S A -0.3440
31 S A -0.5156
32 N A -0.3375
33 Y A -0.0433
34 C A 0.0000
35 L A 0.0000
36 G A 0.0000
37 W A 0.0000
38 F A 0.0000
39 R A -1.1428
40 Q A -1.7987
41 A A -1.8497
42 P A -1.3471
43 G A -1.9074
44 K A -3.2279
45 E A -3.3393
46 R A -2.3771
47 E A -1.7434
48 G A -0.7561
49 V A 0.0000
50 A A 0.0000
51 Q A 0.0000
52 I A 0.0000
53 N A 0.2281
54 I A 0.1614
55 A A -0.0652
56 P A -0.4415
57 G A -0.8080
58 R A -0.8481
59 I A 0.8268
60 Y A 0.4721
61 Y A -0.2550
62 A A 0.0000
63 D A -2.3984
64 S A -1.8057
65 V A 0.0000
66 K A -2.5598
67 G A -1.8379
68 R A -1.7775
69 F A 0.0000
70 T A -0.8318
71 I A 0.0000
72 S A -0.2841
73 R A -0.9241
74 D A -1.7092
75 N A -1.9513
76 S A -1.8270
77 K A -2.5233
78 N A -1.7740
79 T A -1.1632
80 L A 0.0000
81 Y A -0.6306
82 L A 0.0000
83 Q A -1.6447
84 M A 0.0000
85 N A -2.0888
86 S A -1.6163
87 L A 0.0000
88 R A -3.0018
89 A A -2.0479
90 E A -2.4636
91 D A 0.0000
92 T A -0.9614
93 A A 0.0000
94 V A -0.3308
95 Y A 0.0000
96 Y A -0.2089
97 C A 0.0000
98 A A 0.0000
99 S A 0.0000
100 T A 0.0000
101 A A -0.7355
102 G A -0.6774
103 N A -0.5303
104 M A 1.2412
105 Y A 2.2547
106 Y A 1.8896
107 G A 1.3718
108 L A 1.5523
109 R A 0.3335
110 G A -0.5314
111 P A -0.9025
112 A A -0.9979
113 D A -1.5172
114 F A 0.0000
115 D A -1.8941
116 Y A -0.5704
117 W A -0.1422
118 G A -0.0993
119 Q A -0.8796
120 G A 0.0000
121 T A -0.7089
122 Q A -0.9501
123 V A 0.0000
124 T A -0.3197
125 V A 0.0000
126 S A -0.7532
127 S A -0.4744
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Laboratory of Theory of Biopolymers 2018