| Chain sequence(s) |
A: MAEVQLLESGGGLVQPGGSLRLSCAASGFTFSTFSMNWVRQAPGKGLEWVSYISRTSKTIYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGRFFDYWGQGTLVTVSSLEGGGGSAAARLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLSRLIAAERERELEECQRNHEGDEDDSHVRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISENGWVEDY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:52)
[INFO] Main: Simulation completed successfully. (00:07:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.6494 | |
| 2 | A | A | -0.3806 | |
| 3 | E | A | -1.6263 | |
| 4 | V | A | -0.6572 | |
| 5 | Q | A | -0.8271 | |
| 6 | L | A | 0.0000 | |
| 7 | L | A | 0.7026 | |
| 8 | E | A | 0.0000 | |
| 9 | S | A | -0.4436 | |
| 10 | G | A | -0.7789 | |
| 11 | G | A | -0.3328 | |
| 12 | G | A | 0.3116 | |
| 13 | L | A | 1.2820 | |
| 14 | V | A | 0.0000 | |
| 15 | Q | A | -1.4414 | |
| 16 | P | A | -1.6053 | |
| 17 | G | A | -1.5095 | |
| 18 | G | A | -1.0024 | |
| 19 | S | A | -1.3588 | |
| 20 | L | A | -1.1125 | |
| 21 | R | A | -2.2793 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.5390 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.1576 | |
| 26 | A | A | -0.2182 | |
| 27 | S | A | -0.5253 | |
| 28 | G | A | -0.5885 | |
| 29 | F | A | -0.1997 | |
| 30 | T | A | -0.6904 | |
| 31 | F | A | 0.0000 | |
| 32 | S | A | -1.1756 | |
| 33 | T | A | -0.5126 | |
| 34 | F | A | -0.3676 | |
| 35 | S | A | 0.0000 | |
| 36 | M | A | 0.0000 | |
| 37 | N | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | V | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | -0.7155 | |
| 42 | A | A | -1.2031 | |
| 43 | P | A | -1.0792 | |
| 44 | G | A | -1.6253 | |
| 45 | K | A | -2.0939 | |
| 46 | G | A | -0.9586 | |
| 47 | L | A | 0.4810 | |
| 48 | E | A | -0.2192 | |
| 49 | W | A | 0.1887 | |
| 50 | V | A | 0.0000 | |
| 51 | S | A | 0.0000 | |
| 52 | Y | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | S | A | -1.1866 | |
| 55 | R | A | -2.1716 | |
| 56 | T | A | -1.5011 | |
| 57 | S | A | -1.5182 | |
| 58 | K | A | -1.9240 | |
| 59 | T | A | -0.4938 | |
| 60 | I | A | 0.8275 | |
| 61 | Y | A | 1.3451 | |
| 62 | Y | A | -0.0406 | |
| 63 | A | A | -1.0368 | |
| 64 | D | A | -2.2862 | |
| 65 | S | A | -1.7337 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.4163 | |
| 68 | G | A | -1.7331 | |
| 69 | R | A | -1.5307 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.7296 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.4911 | |
| 74 | R | A | -1.4446 | |
| 75 | D | A | -1.9883 | |
| 76 | N | A | -2.6091 | |
| 77 | S | A | -1.9472 | |
| 78 | K | A | -2.5244 | |
| 79 | N | A | -1.8267 | |
| 80 | T | A | 0.0000 | |
| 81 | L | A | 0.0000 | |
| 82 | Y | A | -0.7460 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.6377 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.4341 | |
| 87 | S | A | -1.2722 | |
| 88 | L | A | 0.0000 | |
| 89 | R | A | -2.7686 | |
| 90 | A | A | -1.9652 | |
| 91 | E | A | -2.4147 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.7799 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | 0.0000 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | 0.3137 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | R | A | 0.0279 | |
| 101 | G | A | -0.4771 | |
| 102 | R | A | -0.9657 | |
| 103 | F | A | 0.8988 | |
| 104 | F | A | 0.4631 | |
| 105 | D | A | -0.5884 | |
| 106 | Y | A | 0.4767 | |
| 107 | W | A | 0.4025 | |
| 108 | G | A | 0.0146 | |
| 109 | Q | A | -0.9062 | |
| 110 | G | A | 0.0000 | |
| 111 | T | A | -0.0704 | |
| 112 | L | A | 0.5736 | |
| 113 | V | A | 0.0000 | |
| 114 | T | A | -0.0025 | |
| 115 | V | A | 0.0000 | |
| 116 | S | A | -0.6212 | |
| 117 | S | A | -0.3369 | |
| 118 | L | A | 0.2756 | |
| 119 | E | A | -1.7015 | |
| 120 | G | A | -1.3442 | |
| 121 | G | A | -1.2806 | |
| 122 | G | A | -1.2703 | |
| 123 | G | A | -0.9268 | |
| 124 | S | A | -0.7941 | |
| 125 | A | A | -0.5561 | |
| 126 | A | A | -0.2807 | |
| 127 | A | A | -0.5445 | |
| 128 | R | A | -1.3881 | |
| 129 | L | A | -0.0574 | |
| 130 | N | A | -1.4616 | |
| 131 | F | A | -0.6194 | |
| 132 | G | A | -1.2812 | |
| 133 | D | A | -1.5072 | |
| 134 | D | A | -1.0344 | |
| 135 | I | A | 0.4752 | |
| 136 | P | A | 0.1281 | |
| 137 | S | A | 0.0637 | |
| 138 | A | A | 0.7428 | |
| 139 | L | A | 1.1064 | |
| 140 | R | A | 0.0014 | |
| 141 | I | A | 0.6638 | |
| 142 | A | A | -0.6716 | |
| 143 | K | A | -1.8799 | |
| 144 | K | A | -1.9862 | |
| 145 | K | A | -2.8731 | |
| 146 | R | A | -2.8671 | |
| 147 | W | A | -2.0666 | |
| 148 | N | A | -3.0251 | |
| 149 | S | A | -2.1758 | |
| 150 | I | A | -0.5853 | |
| 151 | E | A | 0.0000 | |
| 152 | E | A | -2.8268 | |
| 153 | R | A | -3.1363 | |
| 154 | R | A | -2.6868 | |
| 155 | I | A | -1.6605 | |
| 156 | H | A | -2.9455 | |
| 157 | Q | A | -3.2583 | |
| 158 | E | A | -1.8997 | |
| 159 | S | A | -1.7324 | |
| 160 | E | A | -2.1046 | |
| 161 | L | A | -0.6198 | |
| 162 | H | A | -0.8787 | |
| 163 | S | A | -0.4987 | |
| 164 | Y | A | 0.6600 | |
| 165 | L | A | 0.6567 | |
| 166 | S | A | -0.1202 | |
| 167 | R | A | -1.0072 | |
| 168 | L | A | -0.0556 | |
| 169 | I | A | -0.5673 | |
| 170 | A | A | -1.6502 | |
| 171 | A | A | -1.9245 | |
| 172 | E | A | -2.7374 | |
| 173 | R | A | -3.7604 | |
| 174 | E | A | -4.1056 | |
| 175 | R | A | -4.4795 | |
| 176 | E | A | -3.9102 | |
| 177 | L | A | -3.7380 | |
| 178 | E | A | -4.7725 | |
| 179 | E | A | -4.8107 | |
| 180 | C | A | 0.0000 | |
| 181 | Q | A | -4.3002 | |
| 182 | R | A | -4.6715 | |
| 183 | N | A | -4.0610 | |
| 184 | H | A | -4.2532 | |
| 185 | E | A | -4.0725 | |
| 186 | G | A | -3.5304 | |
| 187 | D | A | -4.4037 | |
| 188 | E | A | -4.0394 | |
| 189 | D | A | -3.6960 | |
| 190 | D | A | -3.9544 | |
| 191 | S | A | -2.8618 | |
| 192 | H | A | -3.0471 | |
| 193 | V | A | -3.2614 | |
| 194 | R | A | -2.9473 | |
| 195 | A | A | -1.7525 | |
| 196 | Q | A | -1.5425 | |
| 197 | Q | A | -1.9863 | |
| 198 | A | A | -0.9848 | |
| 199 | C | A | -0.4916 | |
| 200 | I | A | 0.0000 | |
| 201 | E | A | -2.3146 | |
| 202 | A | A | -1.6773 | |
| 203 | K | A | -1.7079 | |
| 204 | H | A | 0.0000 | |
| 205 | D | A | -2.8964 | |
| 206 | K | A | -2.9244 | |
| 207 | Y | A | -1.3805 | |
| 208 | M | A | -1.3226 | |
| 209 | A | A | -2.1221 | |
| 210 | D | A | -2.6354 | |
| 211 | M | A | 0.0000 | |
| 212 | D | A | -2.2559 | |
| 213 | E | A | -2.4702 | |
| 214 | L | A | -0.4999 | |
| 215 | F | A | -1.1885 | |
| 216 | S | A | -2.1565 | |
| 217 | Q | A | -2.3649 | |
| 218 | V | A | -1.9891 | |
| 219 | D | A | -3.1585 | |
| 220 | E | A | -4.4093 | |
| 221 | K | A | -4.3575 | |
| 222 | R | A | -3.7523 | |
| 223 | K | A | -4.4915 | |
| 224 | K | A | -4.5519 | |
| 225 | R | A | -3.4930 | |
| 226 | D | A | -2.9932 | |
| 227 | I | A | -1.2662 | |
| 228 | P | A | -1.0880 | |
| 229 | D | A | -1.4861 | |
| 230 | Y | A | 0.4927 | |
| 231 | L | A | 0.0000 | |
| 232 | C | A | 0.0000 | |
| 233 | G | A | 0.0000 | |
| 234 | K | A | -0.7144 | |
| 235 | I | A | 0.3034 | |
| 236 | S | A | -0.0226 | |
| 237 | F | A | 0.7101 | |
| 238 | E | A | -1.0959 | |
| 239 | L | A | -0.7019 | |
| 240 | M | A | 0.0000 | |
| 241 | R | A | -2.1925 | |
| 242 | E | A | -1.8602 | |
| 243 | P | A | 0.0000 | |
| 244 | C | A | 0.0000 | |
| 245 | I | A | 1.0951 | |
| 246 | T | A | 0.0000 | |
| 247 | P | A | -0.1050 | |
| 248 | S | A | -0.2488 | |
| 249 | G | A | -0.2424 | |
| 250 | I | A | 0.3314 | |
| 251 | T | A | 0.2016 | |
| 252 | Y | A | 0.0000 | |
| 253 | D | A | 0.0000 | |
| 254 | R | A | -1.8961 | |
| 255 | K | A | -2.7590 | |
| 256 | D | A | -2.1499 | |
| 257 | I | A | 0.0000 | |
| 258 | E | A | -2.7141 | |
| 259 | E | A | -2.9074 | |
| 260 | H | A | -1.7597 | |
| 261 | L | A | 0.0000 | |
| 262 | Q | A | -2.6104 | |
| 263 | R | A | -2.1630 | |
| 264 | V | A | 0.0607 | |
| 265 | G | A | -0.7274 | |
| 266 | H | A | -1.6052 | |
| 267 | F | A | -0.6301 | |
| 268 | D | A | 0.0000 | |
| 269 | P | A | 0.2457 | |
| 270 | V | A | 1.0933 | |
| 271 | T | A | -0.1198 | |
| 272 | R | A | -1.5262 | |
| 273 | S | A | -0.9517 | |
| 274 | P | A | -1.0216 | |
| 275 | L | A | 0.0000 | |
| 276 | T | A | -1.8517 | |
| 277 | Q | A | -2.5462 | |
| 278 | E | A | -2.3135 | |
| 279 | Q | A | -1.2959 | |
| 280 | L | A | 0.0000 | |
| 281 | I | A | 1.5262 | |
| 282 | P | A | 0.8948 | |
| 283 | N | A | 0.6586 | |
| 284 | L | A | 1.1061 | |
| 285 | A | A | 0.0904 | |
| 286 | M | A | -0.1511 | |
| 287 | K | A | -1.2693 | |
| 288 | E | A | -1.5959 | |
| 289 | V | A | -0.2263 | |
| 290 | I | A | 0.0000 | |
| 291 | D | A | -1.9747 | |
| 292 | A | A | -1.1606 | |
| 293 | F | A | -0.8117 | |
| 294 | I | A | -0.8644 | |
| 295 | S | A | -1.1875 | |
| 296 | E | A | -2.0106 | |
| 297 | N | A | -1.1309 | |
| 298 | G | A | -1.0186 | |
| 299 | W | A | -0.6723 | |
| 300 | V | A | 0.0000 | |
| 301 | E | A | 0.0000 | |
| 302 | D | A | -0.3070 | |
| 303 | Y | A | 0.7532 |