Project name: iDab-UBOX

Status: done

Started: 2026-07-15 15:52:03
Settings
Chain sequence(s) A: MAEVQLLESGGGLVQPGGSLRLSCAASGFTFSTFSMNWVRQAPGKGLEWVSYISRTSKTIYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGRFFDYWGQGTLVTVSSLEGGGGSAAARLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLSRLIAAERERELEECQRNHEGDEDDSHVRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISENGWVEDY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:07:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:07:55)
Show buried residues

Minimal score value
-4.8107
Maximal score value
1.5262
Average score
-1.0991
Total score value
-333.0407

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.6494
2 A A -0.3806
3 E A -1.6263
4 V A -0.6572
5 Q A -0.8271
6 L A 0.0000
7 L A 0.7026
8 E A 0.0000
9 S A -0.4436
10 G A -0.7789
11 G A -0.3328
12 G A 0.3116
13 L A 1.2820
14 V A 0.0000
15 Q A -1.4414
16 P A -1.6053
17 G A -1.5095
18 G A -1.0024
19 S A -1.3588
20 L A -1.1125
21 R A -2.2793
22 L A 0.0000
23 S A -0.5390
24 C A 0.0000
25 A A -0.1576
26 A A -0.2182
27 S A -0.5253
28 G A -0.5885
29 F A -0.1997
30 T A -0.6904
31 F A 0.0000
32 S A -1.1756
33 T A -0.5126
34 F A -0.3676
35 S A 0.0000
36 M A 0.0000
37 N A 0.0000
38 W A 0.0000
39 V A 0.0000
40 R A 0.0000
41 Q A -0.7155
42 A A -1.2031
43 P A -1.0792
44 G A -1.6253
45 K A -2.0939
46 G A -0.9586
47 L A 0.4810
48 E A -0.2192
49 W A 0.1887
50 V A 0.0000
51 S A 0.0000
52 Y A 0.0000
53 I A 0.0000
54 S A -1.1866
55 R A -2.1716
56 T A -1.5011
57 S A -1.5182
58 K A -1.9240
59 T A -0.4938
60 I A 0.8275
61 Y A 1.3451
62 Y A -0.0406
63 A A -1.0368
64 D A -2.2862
65 S A -1.7337
66 V A 0.0000
67 K A -2.4163
68 G A -1.7331
69 R A -1.5307
70 F A 0.0000
71 T A -0.7296
72 I A 0.0000
73 S A -0.4911
74 R A -1.4446
75 D A -1.9883
76 N A -2.6091
77 S A -1.9472
78 K A -2.5244
79 N A -1.8267
80 T A 0.0000
81 L A 0.0000
82 Y A -0.7460
83 L A 0.0000
84 Q A -1.6377
85 M A 0.0000
86 N A -1.4341
87 S A -1.2722
88 L A 0.0000
89 R A -2.7686
90 A A -1.9652
91 E A -2.4147
92 D A 0.0000
93 T A -0.7799
94 A A 0.0000
95 V A 0.0000
96 Y A 0.0000
97 Y A 0.3137
98 C A 0.0000
99 A A 0.0000
100 R A 0.0279
101 G A -0.4771
102 R A -0.9657
103 F A 0.8988
104 F A 0.4631
105 D A -0.5884
106 Y A 0.4767
107 W A 0.4025
108 G A 0.0146
109 Q A -0.9062
110 G A 0.0000
111 T A -0.0704
112 L A 0.5736
113 V A 0.0000
114 T A -0.0025
115 V A 0.0000
116 S A -0.6212
117 S A -0.3369
118 L A 0.2756
119 E A -1.7015
120 G A -1.3442
121 G A -1.2806
122 G A -1.2703
123 G A -0.9268
124 S A -0.7941
125 A A -0.5561
126 A A -0.2807
127 A A -0.5445
128 R A -1.3881
129 L A -0.0574
130 N A -1.4616
131 F A -0.6194
132 G A -1.2812
133 D A -1.5072
134 D A -1.0344
135 I A 0.4752
136 P A 0.1281
137 S A 0.0637
138 A A 0.7428
139 L A 1.1064
140 R A 0.0014
141 I A 0.6638
142 A A -0.6716
143 K A -1.8799
144 K A -1.9862
145 K A -2.8731
146 R A -2.8671
147 W A -2.0666
148 N A -3.0251
149 S A -2.1758
150 I A -0.5853
151 E A 0.0000
152 E A -2.8268
153 R A -3.1363
154 R A -2.6868
155 I A -1.6605
156 H A -2.9455
157 Q A -3.2583
158 E A -1.8997
159 S A -1.7324
160 E A -2.1046
161 L A -0.6198
162 H A -0.8787
163 S A -0.4987
164 Y A 0.6600
165 L A 0.6567
166 S A -0.1202
167 R A -1.0072
168 L A -0.0556
169 I A -0.5673
170 A A -1.6502
171 A A -1.9245
172 E A -2.7374
173 R A -3.7604
174 E A -4.1056
175 R A -4.4795
176 E A -3.9102
177 L A -3.7380
178 E A -4.7725
179 E A -4.8107
180 C A 0.0000
181 Q A -4.3002
182 R A -4.6715
183 N A -4.0610
184 H A -4.2532
185 E A -4.0725
186 G A -3.5304
187 D A -4.4037
188 E A -4.0394
189 D A -3.6960
190 D A -3.9544
191 S A -2.8618
192 H A -3.0471
193 V A -3.2614
194 R A -2.9473
195 A A -1.7525
196 Q A -1.5425
197 Q A -1.9863
198 A A -0.9848
199 C A -0.4916
200 I A 0.0000
201 E A -2.3146
202 A A -1.6773
203 K A -1.7079
204 H A 0.0000
205 D A -2.8964
206 K A -2.9244
207 Y A -1.3805
208 M A -1.3226
209 A A -2.1221
210 D A -2.6354
211 M A 0.0000
212 D A -2.2559
213 E A -2.4702
214 L A -0.4999
215 F A -1.1885
216 S A -2.1565
217 Q A -2.3649
218 V A -1.9891
219 D A -3.1585
220 E A -4.4093
221 K A -4.3575
222 R A -3.7523
223 K A -4.4915
224 K A -4.5519
225 R A -3.4930
226 D A -2.9932
227 I A -1.2662
228 P A -1.0880
229 D A -1.4861
230 Y A 0.4927
231 L A 0.0000
232 C A 0.0000
233 G A 0.0000
234 K A -0.7144
235 I A 0.3034
236 S A -0.0226
237 F A 0.7101
238 E A -1.0959
239 L A -0.7019
240 M A 0.0000
241 R A -2.1925
242 E A -1.8602
243 P A 0.0000
244 C A 0.0000
245 I A 1.0951
246 T A 0.0000
247 P A -0.1050
248 S A -0.2488
249 G A -0.2424
250 I A 0.3314
251 T A 0.2016
252 Y A 0.0000
253 D A 0.0000
254 R A -1.8961
255 K A -2.7590
256 D A -2.1499
257 I A 0.0000
258 E A -2.7141
259 E A -2.9074
260 H A -1.7597
261 L A 0.0000
262 Q A -2.6104
263 R A -2.1630
264 V A 0.0607
265 G A -0.7274
266 H A -1.6052
267 F A -0.6301
268 D A 0.0000
269 P A 0.2457
270 V A 1.0933
271 T A -0.1198
272 R A -1.5262
273 S A -0.9517
274 P A -1.0216
275 L A 0.0000
276 T A -1.8517
277 Q A -2.5462
278 E A -2.3135
279 Q A -1.2959
280 L A 0.0000
281 I A 1.5262
282 P A 0.8948
283 N A 0.6586
284 L A 1.1061
285 A A 0.0904
286 M A -0.1511
287 K A -1.2693
288 E A -1.5959
289 V A -0.2263
290 I A 0.0000
291 D A -1.9747
292 A A -1.1606
293 F A -0.8117
294 I A -0.8644
295 S A -1.1875
296 E A -2.0106
297 N A -1.1309
298 G A -1.0186
299 W A -0.6723
300 V A 0.0000
301 E A 0.0000
302 D A -0.3070
303 Y A 0.7532
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Laboratory of Theory of Biopolymers 2018