| Chain sequence(s) |
A: MSHHHHHHSGNRKKRHGEFFKWFAEFVMSRDVSPKTKKELSQVMQELAELFTSGKFTVDKYMELFAKMSSLTPQFVEEAKGEPNWTEKMMKLVKRTIRSMYDAIYIMNRKEAYEAMIVFMVQMVKSEDLPNLFKEAMRNDSEIDDLHYHIHWNMPRKTDHKMMNRAEEKAEKEGLSPEKVIQAVRLFEWMNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:47)
[INFO] Main: Simulation completed successfully. (00:06:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.2808 | |
| 2 | S | A | -1.0584 | |
| 3 | H | A | -2.2166 | |
| 4 | H | A | -2.6337 | |
| 5 | H | A | -2.7810 | |
| 6 | H | A | -3.1429 | |
| 7 | H | A | -3.1954 | |
| 8 | H | A | -2.9977 | |
| 9 | S | A | -2.4999 | |
| 10 | G | A | -2.6605 | |
| 11 | N | A | -3.2541 | |
| 12 | R | A | -2.6230 | |
| 13 | K | A | -2.6551 | |
| 14 | K | A | -3.7082 | |
| 15 | R | A | -3.6081 | |
| 16 | H | A | 0.0000 | |
| 17 | G | A | 0.0000 | |
| 18 | E | A | -3.3388 | |
| 19 | F | A | -2.0767 | |
| 20 | F | A | 0.0000 | |
| 21 | K | A | -2.5368 | |
| 22 | W | A | -1.3745 | |
| 23 | F | A | 0.0000 | |
| 24 | A | A | -1.7317 | |
| 25 | E | A | -1.7201 | |
| 26 | F | A | -0.7045 | |
| 27 | V | A | 0.0000 | |
| 28 | M | A | -0.7003 | |
| 29 | S | A | -0.7665 | |
| 30 | R | A | -1.2507 | |
| 31 | D | A | -2.1380 | |
| 32 | V | A | -1.9400 | |
| 33 | S | A | -1.5998 | |
| 34 | P | A | -1.9517 | |
| 35 | K | A | -2.7639 | |
| 36 | T | A | -2.1082 | |
| 37 | K | A | -2.2400 | |
| 38 | K | A | -3.1411 | |
| 39 | E | A | -2.8747 | |
| 40 | L | A | 0.0000 | |
| 41 | S | A | 0.0000 | |
| 42 | Q | A | -2.3324 | |
| 43 | V | A | 0.0000 | |
| 44 | M | A | 0.0000 | |
| 45 | Q | A | -2.5121 | |
| 46 | E | A | -2.5904 | |
| 47 | L | A | 0.0000 | |
| 48 | A | A | 0.0000 | |
| 49 | E | A | -3.0625 | |
| 50 | L | A | 0.0000 | |
| 51 | F | A | 0.0000 | |
| 52 | T | A | -2.2169 | |
| 53 | S | A | -1.4438 | |
| 54 | G | A | -1.8053 | |
| 55 | K | A | -2.2221 | |
| 56 | F | A | -1.3355 | |
| 57 | T | A | -1.0276 | |
| 58 | V | A | -1.1172 | |
| 59 | D | A | -2.4860 | |
| 60 | K | A | -2.5295 | |
| 61 | Y | A | 0.0000 | |
| 62 | M | A | -1.8391 | |
| 63 | E | A | -2.7811 | |
| 64 | L | A | 0.0000 | |
| 65 | F | A | 0.0000 | |
| 66 | A | A | -1.1146 | |
| 67 | K | A | -1.7256 | |
| 68 | M | A | 0.0000 | |
| 69 | S | A | 0.0000 | |
| 70 | S | A | -0.5507 | |
| 71 | L | A | -0.6048 | |
| 72 | T | A | 0.0000 | |
| 73 | P | A | 0.0000 | |
| 74 | Q | A | -1.8080 | |
| 75 | F | A | 0.0000 | |
| 76 | V | A | 0.0000 | |
| 77 | E | A | -2.8426 | |
| 78 | E | A | -2.1990 | |
| 79 | A | A | 0.0000 | |
| 80 | K | A | -2.4317 | |
| 81 | G | A | -1.8725 | |
| 82 | E | A | -1.6471 | |
| 83 | P | A | -1.3458 | |
| 84 | N | A | -1.9638 | |
| 85 | W | A | -1.6034 | |
| 86 | T | A | -1.4651 | |
| 87 | E | A | -1.9977 | |
| 88 | K | A | -1.7832 | |
| 89 | M | A | 0.0000 | |
| 90 | M | A | -1.7166 | |
| 91 | K | A | -2.5278 | |
| 92 | L | A | 0.0000 | |
| 93 | V | A | 0.0000 | |
| 94 | K | A | -2.1576 | |
| 95 | R | A | -2.1423 | |
| 96 | T | A | 0.0000 | |
| 97 | I | A | 0.0000 | |
| 98 | R | A | -1.3565 | |
| 99 | S | A | 0.0000 | |
| 100 | M | A | 0.0000 | |
| 101 | Y | A | 0.0000 | |
| 102 | D | A | 0.0000 | |
| 103 | A | A | 0.0000 | |
| 104 | I | A | -0.1659 | |
| 105 | Y | A | -0.5358 | |
| 106 | I | A | -0.4447 | |
| 107 | M | A | 0.0000 | |
| 108 | N | A | -2.4220 | |
| 109 | R | A | -3.0047 | |
| 110 | K | A | -2.8272 | |
| 111 | E | A | -1.9437 | |
| 112 | A | A | 0.0000 | |
| 113 | Y | A | 0.0172 | |
| 114 | E | A | -0.7621 | |
| 115 | A | A | 0.0000 | |
| 116 | M | A | 1.2530 | |
| 117 | I | A | 2.1663 | |
| 118 | V | A | 1.6236 | |
| 119 | F | A | 0.0000 | |
| 120 | M | A | 2.0700 | |
| 121 | V | A | 2.6228 | |
| 122 | Q | A | 1.1889 | |
| 123 | M | A | 0.0000 | |
| 124 | V | A | 0.9072 | |
| 125 | K | A | -1.1386 | |
| 126 | S | A | 0.0000 | |
| 127 | E | A | -2.5072 | |
| 128 | D | A | -2.0484 | |
| 129 | L | A | 0.0000 | |
| 130 | P | A | -1.3693 | |
| 131 | N | A | -2.3456 | |
| 132 | L | A | 0.0000 | |
| 133 | F | A | 0.0000 | |
| 134 | K | A | -2.9242 | |
| 135 | E | A | -3.4822 | |
| 136 | A | A | 0.0000 | |
| 137 | M | A | -2.4190 | |
| 138 | R | A | -3.3141 | |
| 139 | N | A | -3.1566 | |
| 140 | D | A | -2.5429 | |
| 141 | S | A | -2.3053 | |
| 142 | E | A | -2.8216 | |
| 143 | I | A | 0.0000 | |
| 144 | D | A | -2.4027 | |
| 145 | D | A | -2.3710 | |
| 146 | L | A | -1.3297 | |
| 147 | H | A | -1.1901 | |
| 148 | Y | A | -0.9315 | |
| 149 | H | A | -0.9548 | |
| 150 | I | A | -0.5201 | |
| 151 | H | A | -0.9818 | |
| 152 | W | A | -0.6988 | |
| 153 | N | A | -1.3095 | |
| 154 | M | A | -1.2423 | |
| 155 | P | A | -2.0630 | |
| 156 | R | A | -3.3814 | |
| 157 | K | A | -3.2430 | |
| 158 | T | A | -2.2630 | |
| 159 | D | A | -2.5364 | |
| 160 | H | A | -2.9106 | |
| 161 | K | A | -3.2792 | |
| 162 | M | A | -2.2800 | |
| 163 | M | A | 0.0000 | |
| 164 | N | A | -2.9066 | |
| 165 | R | A | -3.8828 | |
| 166 | A | A | -2.6690 | |
| 167 | E | A | -3.4886 | |
| 168 | E | A | -4.7687 | |
| 169 | K | A | -4.8699 | |
| 170 | A | A | 0.0000 | |
| 171 | E | A | -4.7661 | |
| 172 | K | A | -4.6108 | |
| 173 | E | A | -4.0250 | |
| 174 | G | A | -2.7016 | |
| 175 | L | A | -2.1173 | |
| 176 | S | A | -1.6083 | |
| 177 | P | A | -1.6877 | |
| 178 | E | A | -2.2905 | |
| 179 | K | A | -2.2969 | |
| 180 | V | A | 0.0000 | |
| 181 | I | A | -0.4629 | |
| 182 | Q | A | -0.8460 | |
| 183 | A | A | -0.4184 | |
| 184 | V | A | 0.0000 | |
| 185 | R | A | 0.1531 | |
| 186 | L | A | 1.2147 | |
| 187 | F | A | 0.9908 | |
| 188 | E | A | 0.0000 | |
| 189 | W | A | 0.7291 | |
| 190 | M | A | 0.9595 | |
| 191 | N | A | -0.5082 | |
| 192 | S | A | -0.3020 |