| Chain sequence(s) |
L: KYGVLPGPWD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:03)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:03)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:03)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:22)
[INFO] Main: Simulation completed successfully. (00:00:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | K | L | -1.6536 | |
| 1 | Y | L | 0.9255 | |
| 2 | G | L | 0.2687 | |
| 3 | V | L | 1.9828 | |
| 4 | L | L | 1.7335 | |
| 5 | P | L | -0.0649 | |
| 6 | G | L | -0.5004 | |
| 7 | P | L | -0.1117 | |
| 8 | W | L | 0.8133 | |
| 9 | D | L | -1.7532 |