| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFRDIIKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGRGSVGHPLFNKLGDTENPTEPLHEGPDVRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPVGVPLPDDPPPSPLYVRPPPESPEAVLPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPENNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9438 | |
| 2 | L | A | 1.9653 | |
| 3 | P | A | 0.8409 | |
| 4 | P | A | 0.3750 | |
| 5 | T | A | 0.1273 | |
| 6 | T | A | 0.1299 | |
| 7 | P | A | 0.1666 | |
| 8 | V | A | 1.2100 | |
| 9 | A | A | 0.0847 | |
| 10 | K | A | -1.0302 | |
| 11 | V | A | -0.1766 | |
| 12 | Q | A | -1.4091 | |
| 13 | S | A | -1.5479 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3956 | |
| 16 | E | A | -2.4249 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4664 | |
| 20 | P | A | 0.1103 | |
| 21 | T | A | 0.1103 | |
| 22 | S | A | -0.1709 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1063 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2887 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8967 | |
| 31 | R | A | -2.6811 | |
| 32 | L | A | -0.8037 | |
| 33 | L | A | 1.1604 | |
| 34 | T | A | 1.3787 | |
| 35 | V | A | 1.8513 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1885 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6220 | |
| 40 | R | A | -1.6064 | |
| 41 | D | A | -0.6239 | |
| 42 | I | A | 0.9277 | |
| 43 | I | A | 1.2413 | |
| 44 | K | A | -1.0716 | |
| 45 | N | A | -1.8805 | |
| 46 | G | A | -1.2016 | |
| 47 | K | A | -0.9031 | |
| 48 | V | A | 1.5157 | |
| 49 | V | A | 2.0872 | |
| 50 | V | A | 1.3053 | |
| 51 | P | A | 0.5369 | |
| 52 | K | A | -0.5807 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1584 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3884 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2723 | |
| 70 | K | A | -1.7927 | |
| 71 | F | A | -0.6417 | |
| 72 | A | A | -0.5727 | |
| 73 | L | A | -0.8751 | |
| 74 | P | A | -1.2184 | |
| 75 | Q | A | -2.4975 | |
| 76 | K | A | -3.1054 | |
| 77 | D | A | -2.9887 | |
| 78 | F | A | -1.6726 | |
| 79 | Y | A | -1.8821 | |
| 80 | D | A | -2.6809 | |
| 81 | P | A | -2.3027 | |
| 82 | E | A | -3.0438 | |
| 83 | K | A | -3.3903 | |
| 84 | E | A | -2.4518 | |
| 85 | R | A | -1.2844 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6466 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9898 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3710 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6959 | |
| 99 | G | A | -0.5398 | |
| 100 | P | A | -0.3804 | |
| 101 | L | A | 0.0930 | |
| 102 | G | A | -0.0764 | |
| 103 | R | A | -0.3657 | |
| 104 | G | A | -0.3444 | |
| 105 | S | A | -0.4709 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1048 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3697 | |
| 110 | L | A | 0.1732 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9566 | |
| 113 | K | A | -0.2568 | |
| 114 | L | A | -0.9645 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.3801 | |
| 117 | T | A | -0.9779 | |
| 118 | E | A | -1.8794 | |
| 119 | N | A | -2.2600 | |
| 120 | P | A | -1.9306 | |
| 121 | T | A | -1.6678 | |
| 122 | E | A | -2.3634 | |
| 123 | P | A | -1.5522 | |
| 124 | L | A | -1.2821 | |
| 125 | H | A | -2.0474 | |
| 126 | E | A | -2.7177 | |
| 127 | G | A | -2.1685 | |
| 128 | P | A | -1.8243 | |
| 129 | D | A | -2.2895 | |
| 130 | V | A | -1.4945 | |
| 131 | R | A | -0.7577 | |
| 132 | V | A | 0.3987 | |
| 133 | A | A | 0.4169 | |
| 134 | F | A | 0.2644 | |
| 135 | S | A | -0.1061 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5268 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5498 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1835 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1846 | |
| 157 | D | A | 0.3525 | |
| 158 | L | A | 0.7967 | |
| 159 | A | A | 0.1662 | |
| 160 | E | A | -1.4584 | |
| 161 | P | A | -0.2224 | |
| 162 | C | A | 0.1842 | |
| 163 | P | A | -0.1724 | |
| 164 | G | A | -0.0836 | |
| 165 | L | A | 0.5776 | |
| 166 | P | A | -0.1226 | |
| 167 | P | A | -0.3432 | |
| 168 | G | A | -0.4260 | |
| 169 | A | A | 0.3008 | |
| 170 | C | A | 1.0184 | |
| 171 | P | A | 0.5201 | |
| 172 | P | A | 0.8399 | |
| 173 | I | A | 1.9979 | |
| 174 | Q | A | 0.8521 | |
| 175 | L | A | 1.4869 | |
| 176 | V | A | 0.8554 | |
| 177 | N | A | -0.3083 | |
| 178 | S | A | 0.0187 | |
| 179 | V | A | 0.4222 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3828 | |
| 182 | D | A | 0.0756 | |
| 183 | G | A | -0.1593 | |
| 184 | D | A | -0.5061 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1493 | |
| 190 | F | A | 0.0657 | |
| 191 | G | A | -0.1026 | |
| 192 | N | A | -0.2276 | |
| 193 | M | A | -0.0660 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3434 | |
| 197 | E | A | -2.5445 | |
| 198 | L | A | -1.1932 | |
| 199 | Q | A | -2.5256 | |
| 200 | Q | A | -3.2580 | |
| 201 | D | A | -3.3992 | |
| 202 | R | A | -3.3060 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1320 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3408 | |
| 211 | S | A | -1.8917 | |
| 212 | T | A | -1.3820 | |
| 213 | R | A | -1.9466 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1412 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3690 | |
| 220 | L | A | 0.6009 | |
| 221 | K | A | -1.1233 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8164 | |
| 224 | N | A | -1.4961 | |
| 225 | E | A | -1.2367 | |
| 226 | A | A | -0.6044 | |
| 227 | Y | A | -0.3681 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6804 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0735 | |
| 234 | F | A | 0.2554 | |
| 235 | G | A | -0.8334 | |
| 236 | R | A | -2.6276 | |
| 237 | R | A | -2.9179 | |
| 238 | E | A | -2.1432 | |
| 239 | Q | A | -0.1460 | |
| 240 | V | A | 1.4940 | |
| 241 | Y | A | 1.2685 | |
| 242 | A | A | 0.2108 | |
| 243 | R | A | -1.1499 | |
| 244 | H | A | -0.9847 | |
| 245 | F | A | 0.0464 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.2974 | |
| 249 | A | A | -1.0722 | |
| 250 | G | A | -1.0299 | |
| 251 | P | A | -0.2360 | |
| 252 | V | A | 0.4160 | |
| 253 | G | A | 0.4112 | |
| 254 | V | A | 1.6450 | |
| 255 | P | A | 0.6118 | |
| 256 | L | A | 0.5734 | |
| 257 | P | A | -0.6116 | |
| 258 | D | A | -2.1624 | |
| 259 | D | A | -1.5059 | |
| 260 | P | A | -1.2106 | |
| 261 | P | A | -0.6725 | |
| 262 | P | A | -0.2337 | |
| 263 | S | A | -0.1687 | |
| 264 | P | A | 0.5568 | |
| 265 | L | A | 1.4483 | |
| 266 | Y | A | 1.1381 | |
| 267 | V | A | 1.2979 | |
| 268 | R | A | -0.7988 | |
| 269 | P | A | -0.8512 | |
| 270 | P | A | -1.4206 | |
| 271 | P | A | -1.5635 | |
| 272 | E | A | -2.2075 | |
| 273 | S | A | -1.5890 | |
| 274 | P | A | -1.1336 | |
| 275 | E | A | -1.7355 | |
| 276 | A | A | -0.7556 | |
| 277 | V | A | 1.0994 | |
| 278 | L | A | 0.8577 | |
| 279 | P | A | 0.0671 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | 0.6390 | |
| 282 | D | A | 0.0165 | |
| 283 | Y | A | 1.1238 | |
| 284 | F | A | 0.8215 | |
| 285 | G | A | 0.2301 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9450 | |
| 291 | L | A | 1.6591 | |
| 292 | V | A | 0.6943 | |
| 293 | S | A | -0.1571 | |
| 294 | S | A | -0.9592 | |
| 295 | D | A | -1.8400 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1326 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6783 | |
| 301 | R | A | -1.9309 | |
| 302 | P | A | -1.0099 | |
| 303 | F | A | -0.2135 | |
| 304 | W | A | -0.5775 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0839 | |
| 307 | R | A | -2.8322 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2580 | |
| 310 | G | A | -1.2208 | |
| 311 | N | A | -1.2677 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7816 | |
| 319 | N | A | -0.9175 | |
| 320 | E | A | -1.0311 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.2761 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | 0.0112 | |
| 333 | N | A | 0.6014 | |
| 334 | F | A | 1.7933 | |
| 335 | T | A | 0.8948 | |
| 336 | I | A | 0.4709 | |
| 337 | S | A | -0.9521 | |
| 338 | Q | A | -1.7468 | |
| 339 | Q | A | -1.3941 | |
| 340 | L | A | 0.6350 | |
| 341 | C | A | 0.2411 | |
| 342 | T | A | -0.3159 | |
| 343 | P | A | -0.8788 | |
| 344 | E | A | -2.2442 | |
| 345 | N | A | -2.0393 | |
| 346 | N | A | -1.4128 | |
| 347 | V | A | 0.6117 | |
| 348 | Y | A | 0.9664 | |
| 349 | D | A | -0.3196 | |
| 350 | P | A | -0.4224 | |
| 351 | S | A | -0.3375 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.8238 | |
| 354 | K | A | -1.8018 | |
| 355 | N | A | -1.7723 | |
| 356 | Y | A | -0.0722 | |
| 357 | L | A | 0.6622 | |
| 358 | R | A | 1.0026 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3997 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0718 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0517 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6864 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3011 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3142 | |
| 376 | L | A | -1.7099 | |
| 377 | D | A | -1.9895 | |
| 378 | P | A | -1.0367 | |
| 379 | G | A | -1.0125 | |
| 380 | V | A | -0.9335 | |
| 381 | L | A | -0.5330 | |
| 382 | A | A | -0.6532 | |
| 383 | H | A | -0.8079 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3980 | |
| 386 | T | A | -0.5464 | |
| 387 | M | A | -0.2946 | |
| 388 | N | A | -0.8542 | |
| 389 | P | A | -1.2280 | |
| 390 | T | A | -1.3949 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3776 | |
| 393 | E | A | -2.6979 | |
| 394 | N | A | -2.4503 | |
| 395 | W | A | -1.2750 | |
| 396 | N | A | -0.9805 | |
| 397 | L | A | -0.1498 | |
| 398 | G | A | 0.5694 | |
| 399 | F | A | 2.4338 | |
| 400 | V | A | 1.8543 | |
| 401 | P | A | 0.0625 | |
| 402 | P | A | -1.7558 | |
| 403 | K | A | -3.2937 | |
| 404 | E | A | -3.8063 | |
| 405 | R | A | -3.8096 | |
| 406 | E | A | -3.7359 | |
| 407 | D | A | -2.8439 | |
| 408 | P | A | -1.7465 | |
| 409 | Y | A | -0.9833 | |
| 410 | K | A | -2.1108 | |
| 411 | G | A | -0.6386 | |
| 412 | L | A | 0.6711 | |
| 413 | I | A | 1.5787 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4138 | |
| 416 | E | A | -1.7311 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9624 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0557 | |
| 421 | E | A | -2.7851 | |
| 422 | R | A | -2.5678 | |
| 423 | F | A | -1.2798 | |
| 424 | S | A | -1.4701 | |
| 425 | Q | A | -1.7614 | |
| 426 | D | A | -2.8989 | |
| 427 | L | A | -1.9819 | |
| 428 | D | A | -2.7555 | |
| 429 | Q | A | -2.6109 | |
| 430 | F | A | -1.4137 | |
| 431 | A | A | -0.8963 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5989 | |
| 435 | K | A | -0.6995 | |
| 436 | F | A | 0.1507 | |
| 437 | L | A | 1.0264 | |
| 438 | Y | A | 0.8273 | |
| 439 | Q | A | -0.2756 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine