| Chain sequence(s) |
A: AICTGADRPCAACCPCCPGTSCKAESNGVSYCRKDEP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:22)
[INFO] Main: Simulation completed successfully. (00:00:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 1.1030 | |
| 2 | I | A | 2.1874 | |
| 3 | C | A | 1.3544 | |
| 4 | T | A | 0.0636 | |
| 5 | G | A | 0.0000 | |
| 6 | A | A | -2.5689 | |
| 7 | D | A | -3.2081 | |
| 8 | R | A | -2.8889 | |
| 9 | P | A | -1.2348 | |
| 10 | C | A | -0.4230 | |
| 11 | A | A | 0.2081 | |
| 12 | A | A | 0.4525 | |
| 13 | C | A | 0.8245 | |
| 14 | C | A | 0.9480 | |
| 15 | P | A | 0.4720 | |
| 16 | C | A | -0.6029 | |
| 17 | C | A | 0.0536 | |
| 18 | P | A | -0.8259 | |
| 19 | G | A | -1.8315 | |
| 20 | T | A | -2.6791 | |
| 21 | S | A | -1.6957 | |
| 22 | C | A | -1.2419 | |
| 23 | K | A | -1.6070 | |
| 24 | A | A | -1.0566 | |
| 25 | E | A | -1.5491 | |
| 26 | S | A | -1.2197 | |
| 27 | N | A | -1.5335 | |
| 28 | G | A | -0.8382 | |
| 29 | V | A | 0.1576 | |
| 30 | S | A | -0.6432 | |
| 31 | Y | A | -1.1652 | |
| 32 | C | A | 0.0000 | |
| 33 | R | A | -3.6221 | |
| 34 | K | A | -4.0930 | |
| 35 | D | A | -3.9568 | |
| 36 | E | A | -3.3971 | |
| 37 | P | A | -1.5086 |