Project name: query_structure

Status: done

Started: 2026-03-16 20:32:07
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Chain sequence(s) A: LPAPKNLVVSRVTEDSARLSWFRLRIVQTFDSFLIQYQESEKVGEAIVLIVPGSERSYDLTGLKPGTEYTVSIYGVITVVELLQQSNPLSAIFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:51)
Show buried residues

Minimal score value
-3.0882
Maximal score value
2.4447
Average score
-0.4223
Total score value
-40.1197

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A -0.0411
2 P A -0.2311
3 A A -0.9853
4 P A 0.0000
5 K A -1.8027
6 N A -1.3602
7 L A -0.2730
8 V A 0.7204
9 V A 0.3595
10 S A -0.7799
11 R A -2.0238
12 V A -1.0684
13 T A -1.8204
14 E A -3.0806
15 D A -2.7878
16 S A -2.1097
17 A A 0.0000
18 R A -1.2909
19 L A 0.0000
20 S A -0.3019
21 W A 0.0000
22 F A -0.0352
23 R A -0.7589
24 L A -0.2666
25 R A -0.4697
26 I A 1.7654
27 V A 1.9769
28 Q A -0.0428
29 T A -0.6806
30 F A 0.0000
31 D A -1.7480
32 S A -0.7700
33 F A 0.0000
34 L A 1.1539
35 I A 0.0000
36 Q A 0.8682
37 Y A 0.5388
38 Q A -0.6679
39 E A -1.7862
40 S A -1.5433
41 E A -2.5702
42 K A -1.8925
43 V A 0.0144
44 G A -0.8700
45 E A -1.6584
46 A A -0.0714
47 I A 1.2956
48 V A 2.2829
49 L A 2.2852
50 I A 2.4447
51 V A 0.0000
52 P A -0.6973
53 G A -1.1830
54 S A -1.3630
55 E A -1.3976
56 R A -0.8651
57 S A -0.6056
58 Y A -0.7424
59 D A -1.6191
60 L A 0.0000
61 T A -1.3721
62 G A -1.5193
63 L A 0.0000
64 K A -3.0882
65 P A -2.6262
66 G A -1.9280
67 T A -2.3864
68 E A -2.1890
69 Y A 0.0000
70 T A -0.0346
71 V A 0.0000
72 S A 0.2311
73 I A 0.0000
74 Y A -0.1909
75 G A 0.0000
76 V A 0.0000
77 I A 0.0000
78 T A 0.5839
79 V A 1.5621
80 V A 1.8454
81 E A 0.2098
82 L A 1.8848
83 L A 1.5651
84 Q A 0.1422
85 Q A -1.0172
86 S A 0.0000
87 N A -1.3952
88 P A -0.9166
89 L A -0.7122
90 S A 0.0001
91 A A 1.0719
92 I A 1.6973
93 F A 0.0000
94 T A -0.9440
95 T A -2.0378
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Laboratory of Theory of Biopolymers 2018