| Chain sequence(s) |
A: MIPRGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVLAHRQYPPGPHSTNYYIKVRAGDNKYMHLKVFNGPYHFHHYYKHADRVLTGYQVDKNKDDELTGF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:52)
[INFO] Main: Simulation completed successfully. (00:01:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.7038 | |
| 2 | I | A | 1.8134 | |
| 3 | P | A | 0.1829 | |
| 4 | R | A | -1.2587 | |
| 5 | G | A | -1.1114 | |
| 6 | L | A | -0.8071 | |
| 7 | S | A | -1.2176 | |
| 8 | E | A | -2.1231 | |
| 9 | A | A | -1.6836 | |
| 10 | K | A | -1.5424 | |
| 11 | P | A | -0.9163 | |
| 12 | A | A | -0.9041 | |
| 13 | T | A | -1.2697 | |
| 14 | P | A | -1.7372 | |
| 15 | E | A | -2.8345 | |
| 16 | I | A | 0.0000 | |
| 17 | Q | A | -2.5988 | |
| 18 | E | A | -3.6103 | |
| 19 | I | A | 0.0000 | |
| 20 | V | A | 0.0000 | |
| 21 | D | A | -3.4490 | |
| 22 | K | A | -2.6367 | |
| 23 | V | A | 0.0000 | |
| 24 | K | A | -2.1992 | |
| 25 | P | A | -1.8984 | |
| 26 | Q | A | -1.9231 | |
| 27 | L | A | 0.0000 | |
| 28 | E | A | -2.9637 | |
| 29 | E | A | -3.6513 | |
| 30 | K | A | -3.1088 | |
| 31 | T | A | -2.4456 | |
| 32 | N | A | -3.3313 | |
| 33 | E | A | -3.1777 | |
| 34 | T | A | -1.8855 | |
| 35 | Y | A | -1.2926 | |
| 36 | G | A | -1.4210 | |
| 37 | K | A | -2.5673 | |
| 38 | L | A | 0.0000 | |
| 39 | E | A | -2.1466 | |
| 40 | A | A | -1.5270 | |
| 41 | V | A | -0.6279 | |
| 42 | Q | A | -1.2045 | |
| 43 | Y | A | 0.0000 | |
| 44 | K | A | 0.0000 | |
| 45 | T | A | -0.4713 | |
| 46 | Q | A | -0.4442 | |
| 47 | V | A | -0.0336 | |
| 48 | L | A | -0.3564 | |
| 49 | A | A | -1.2239 | |
| 50 | H | A | -1.8634 | |
| 51 | R | A | -2.5332 | |
| 52 | Q | A | -1.7929 | |
| 53 | Y | A | -0.0246 | |
| 54 | P | A | -0.2650 | |
| 55 | P | A | -0.9846 | |
| 56 | G | A | -0.8846 | |
| 57 | P | A | -0.9381 | |
| 58 | H | A | -1.3189 | |
| 59 | S | A | -0.4329 | |
| 60 | T | A | 0.0000 | |
| 61 | N | A | 0.0000 | |
| 62 | Y | A | 0.1551 | |
| 63 | Y | A | 0.0000 | |
| 64 | I | A | 0.0000 | |
| 65 | K | A | 0.0000 | |
| 66 | V | A | 0.0000 | |
| 67 | R | A | -2.7755 | |
| 68 | A | A | -2.1724 | |
| 69 | G | A | -2.5129 | |
| 70 | D | A | -2.9684 | |
| 71 | N | A | -3.7889 | |
| 72 | K | A | -3.5456 | |
| 73 | Y | A | 0.0000 | |
| 74 | M | A | 0.0000 | |
| 75 | H | A | 0.0000 | |
| 76 | L | A | 0.0000 | |
| 77 | K | A | 0.0038 | |
| 78 | V | A | 0.0000 | |
| 79 | F | A | 0.0238 | |
| 80 | N | A | -0.5181 | |
| 81 | G | A | 0.0000 | |
| 82 | P | A | -0.3794 | |
| 83 | Y | A | 0.6755 | |
| 84 | H | A | 0.3186 | |
| 85 | F | A | 1.1529 | |
| 86 | H | A | -0.0993 | |
| 87 | H | A | -0.5264 | |
| 88 | Y | A | 0.5511 | |
| 89 | Y | A | 0.0049 | |
| 90 | K | A | -1.8492 | |
| 91 | H | A | -1.5822 | |
| 92 | A | A | -1.6148 | |
| 93 | D | A | -2.2086 | |
| 94 | R | A | -1.1951 | |
| 95 | V | A | -0.2961 | |
| 96 | L | A | 0.0000 | |
| 97 | T | A | 0.1574 | |
| 98 | G | A | 0.0153 | |
| 99 | Y | A | 0.3067 | |
| 100 | Q | A | -0.1889 | |
| 101 | V | A | -0.3541 | |
| 102 | D | A | -2.3010 | |
| 103 | K | A | -3.1795 | |
| 104 | N | A | -4.2485 | |
| 105 | K | A | -4.2379 | |
| 106 | D | A | -3.8041 | |
| 107 | D | A | -3.4957 | |
| 108 | E | A | -3.1221 | |
| 109 | L | A | 0.0000 | |
| 110 | T | A | -0.5323 | |
| 111 | G | A | -0.1228 | |
| 112 | F | A | 0.8135 |