| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTTPLHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPEGVPLPSAPPPSPLYTPPPPTSPYWKLPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPANNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.8856 | |
| 2 | L | A | 1.8651 | |
| 3 | P | A | 0.6082 | |
| 4 | P | A | 0.1406 | |
| 5 | T | A | 0.0058 | |
| 6 | T | A | -0.0138 | |
| 7 | P | A | 0.2705 | |
| 8 | V | A | 1.2385 | |
| 9 | A | A | 0.0543 | |
| 10 | K | A | -1.0070 | |
| 11 | V | A | -0.1531 | |
| 12 | Q | A | -1.3861 | |
| 13 | S | A | -1.5430 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4180 | |
| 16 | E | A | -2.4350 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4546 | |
| 20 | P | A | 0.1293 | |
| 21 | T | A | 0.1839 | |
| 22 | S | A | -0.0898 | |
| 23 | L | A | 0.1355 | |
| 24 | F | A | -0.0041 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2998 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9065 | |
| 31 | R | A | -2.6868 | |
| 32 | L | A | -0.8053 | |
| 33 | L | A | 1.1645 | |
| 34 | T | A | 1.3844 | |
| 35 | V | A | 1.8709 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2434 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6197 | |
| 40 | K | A | -1.6949 | |
| 41 | D | A | -0.7192 | |
| 42 | I | A | 1.3211 | |
| 43 | V | A | 2.2944 | |
| 44 | V | A | 1.8372 | |
| 45 | N | A | -0.4520 | |
| 46 | G | A | -0.2975 | |
| 47 | K | A | -0.0340 | |
| 48 | V | A | 2.1317 | |
| 49 | V | A | 2.7617 | |
| 50 | V | A | 1.5708 | |
| 51 | P | A | 0.3636 | |
| 52 | K | A | -0.6739 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1185 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3893 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2749 | |
| 70 | K | A | -1.7944 | |
| 71 | F | A | -0.6436 | |
| 72 | A | A | -0.5792 | |
| 73 | L | A | -0.8612 | |
| 74 | P | A | -1.2716 | |
| 75 | Q | A | -2.5058 | |
| 76 | K | A | -3.1100 | |
| 77 | D | A | -2.9896 | |
| 78 | F | A | -1.6515 | |
| 79 | Y | A | -1.8816 | |
| 80 | D | A | -2.6824 | |
| 81 | P | A | -2.3625 | |
| 82 | E | A | -3.0503 | |
| 83 | K | A | -3.3967 | |
| 84 | E | A | -2.4602 | |
| 85 | R | A | -1.2926 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6262 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9668 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3643 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7019 | |
| 99 | G | A | -0.5424 | |
| 100 | P | A | -0.3975 | |
| 101 | L | A | 0.0585 | |
| 102 | G | A | -0.1299 | |
| 103 | K | A | -0.4449 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4069 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1381 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4024 | |
| 110 | L | A | 0.2803 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0359 | |
| 113 | K | A | -0.3501 | |
| 114 | L | A | -1.1040 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.1290 | |
| 117 | T | A | -0.8720 | |
| 118 | E | A | -1.8732 | |
| 119 | N | A | -2.0127 | |
| 120 | P | A | -1.3915 | |
| 121 | T | A | -0.8066 | |
| 122 | T | A | -0.5921 | |
| 123 | P | A | -0.2967 | |
| 124 | L | A | -0.8307 | |
| 125 | H | A | -1.8755 | |
| 126 | E | A | -2.7713 | |
| 127 | G | A | -2.2597 | |
| 128 | A | A | -1.5956 | |
| 129 | D | A | -2.4757 | |
| 130 | D | A | -2.0671 | |
| 131 | R | A | -1.0358 | |
| 132 | V | A | 0.2555 | |
| 133 | A | A | 0.4357 | |
| 134 | F | A | 0.2738 | |
| 135 | S | A | -0.0796 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5193 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5627 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2152 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1229 | |
| 157 | D | A | 0.2906 | |
| 158 | I | A | 0.8339 | |
| 159 | A | A | 0.1121 | |
| 160 | E | A | -1.4845 | |
| 161 | P | A | -0.2326 | |
| 162 | C | A | 0.1880 | |
| 163 | P | A | -0.1616 | |
| 164 | G | A | -0.0618 | |
| 165 | L | A | 0.6230 | |
| 166 | P | A | -0.0942 | |
| 167 | P | A | -0.3288 | |
| 168 | G | A | -0.4189 | |
| 169 | A | A | 0.3069 | |
| 170 | C | A | 1.1037 | |
| 171 | P | A | 0.5557 | |
| 172 | P | A | 0.7925 | |
| 173 | I | A | 2.0479 | |
| 174 | Q | A | 0.8505 | |
| 175 | L | A | 1.4504 | |
| 176 | V | A | 0.8252 | |
| 177 | N | A | -0.3156 | |
| 178 | S | A | -0.0916 | |
| 179 | V | A | 0.4323 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3846 | |
| 182 | D | A | 0.0851 | |
| 183 | G | A | -0.1573 | |
| 184 | D | A | -0.5412 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1355 | |
| 190 | F | A | 0.0606 | |
| 191 | G | A | -0.1087 | |
| 192 | N | A | -0.2724 | |
| 193 | M | A | -0.1392 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3845 | |
| 197 | E | A | -2.6103 | |
| 198 | L | A | -1.2110 | |
| 199 | Q | A | -2.5373 | |
| 200 | Q | A | -3.3023 | |
| 201 | D | A | -3.5601 | |
| 202 | R | A | -3.3294 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2164 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3443 | |
| 211 | S | A | -1.8881 | |
| 212 | T | A | -1.4513 | |
| 213 | R | A | -2.1125 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1650 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3679 | |
| 220 | L | A | 0.5998 | |
| 221 | K | A | -1.1202 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8206 | |
| 224 | N | A | -1.5821 | |
| 225 | E | A | -1.2407 | |
| 226 | A | A | -0.5986 | |
| 227 | Y | A | -0.3572 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6845 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0751 | |
| 234 | F | A | 0.2602 | |
| 235 | G | A | -0.8146 | |
| 236 | R | A | -2.5800 | |
| 237 | R | A | -2.8186 | |
| 238 | E | A | -2.0817 | |
| 239 | Q | A | -0.1429 | |
| 240 | V | A | 1.4443 | |
| 241 | Y | A | 1.2177 | |
| 242 | A | A | 0.1520 | |
| 243 | R | A | -1.2207 | |
| 244 | H | A | -1.0632 | |
| 245 | F | A | -0.0367 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.4930 | |
| 249 | C | A | -1.2354 | |
| 250 | G | A | -1.1011 | |
| 251 | P | A | -0.6867 | |
| 252 | E | A | -0.3286 | |
| 253 | G | A | 0.0969 | |
| 254 | V | A | 1.3316 | |
| 255 | P | A | 0.4117 | |
| 256 | L | A | 0.8714 | |
| 257 | P | A | 0.2923 | |
| 258 | S | A | -0.0964 | |
| 259 | A | A | -0.1354 | |
| 260 | P | A | -0.5554 | |
| 261 | P | A | -0.4361 | |
| 262 | P | A | -0.3168 | |
| 263 | S | A | 0.0639 | |
| 264 | P | A | 0.3937 | |
| 265 | L | A | 1.4797 | |
| 266 | Y | A | 0.7860 | |
| 267 | T | A | 0.0660 | |
| 268 | P | A | 0.1161 | |
| 269 | P | A | 0.2172 | |
| 270 | P | A | -0.0102 | |
| 271 | P | A | -0.1409 | |
| 272 | T | A | 0.1042 | |
| 273 | S | A | 0.2528 | |
| 274 | P | A | 0.3182 | |
| 275 | Y | A | 1.1500 | |
| 276 | W | A | 0.8610 | |
| 277 | K | A | -0.5304 | |
| 278 | L | A | 0.3184 | |
| 279 | P | A | -0.4011 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | 0.0260 | |
| 282 | D | A | -0.5817 | |
| 283 | Y | A | 0.8464 | |
| 284 | F | A | 0.6769 | |
| 285 | G | A | 0.1863 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8989 | |
| 291 | L | A | 1.6264 | |
| 292 | V | A | 0.6592 | |
| 293 | S | A | -0.1604 | |
| 294 | S | A | -0.9611 | |
| 295 | D | A | -1.8417 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1010 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6360 | |
| 301 | R | A | -1.8561 | |
| 302 | P | A | -0.9768 | |
| 303 | F | A | -0.1831 | |
| 304 | W | A | -0.5481 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0756 | |
| 307 | R | A | -2.8308 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3882 | |
| 310 | G | A | -1.2307 | |
| 311 | N | A | -1.2745 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7610 | |
| 319 | N | A | -0.8312 | |
| 320 | E | A | -1.0203 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3041 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0103 | |
| 333 | N | A | 0.5884 | |
| 334 | F | A | 1.7643 | |
| 335 | T | A | 0.8758 | |
| 336 | I | A | 0.4597 | |
| 337 | S | A | -0.8562 | |
| 338 | Q | A | -1.5715 | |
| 339 | Q | A | -1.1868 | |
| 340 | L | A | 0.6231 | |
| 341 | C | A | 0.1403 | |
| 342 | T | A | -0.0928 | |
| 343 | P | A | -0.6096 | |
| 344 | A | A | -0.4711 | |
| 345 | N | A | -1.0458 | |
| 346 | N | A | -0.8299 | |
| 347 | V | A | 1.1726 | |
| 348 | Y | A | 1.2631 | |
| 349 | D | A | -0.0686 | |
| 350 | P | A | -0.2562 | |
| 351 | S | A | -0.2190 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5412 | |
| 354 | K | A | -1.6801 | |
| 355 | N | A | -1.7091 | |
| 356 | Y | A | -0.0875 | |
| 357 | L | A | 0.6586 | |
| 358 | R | A | 1.0052 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4052 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0807 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0631 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6901 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3047 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3186 | |
| 376 | L | A | -1.7213 | |
| 377 | D | A | -2.0118 | |
| 378 | P | A | -0.8671 | |
| 379 | G | A | -0.8713 | |
| 380 | V | A | -0.8826 | |
| 381 | L | A | -0.2597 | |
| 382 | A | A | -0.1345 | |
| 383 | H | A | -0.7236 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -0.6710 | |
| 386 | T | A | -0.3622 | |
| 387 | M | A | -0.1519 | |
| 388 | N | A | -0.7186 | |
| 389 | P | A | -1.0467 | |
| 390 | T | A | -1.3325 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.2987 | |
| 393 | E | A | -2.6688 | |
| 394 | N | A | -2.2621 | |
| 395 | W | A | -1.3049 | |
| 396 | N | A | -1.0443 | |
| 397 | L | A | -0.1271 | |
| 398 | G | A | 0.5413 | |
| 399 | F | A | 2.4219 | |
| 400 | V | A | 1.8310 | |
| 401 | P | A | 0.0598 | |
| 402 | P | A | -1.8157 | |
| 403 | K | A | -3.3101 | |
| 404 | E | A | -3.7560 | |
| 405 | R | A | -3.8667 | |
| 406 | E | A | -3.7746 | |
| 407 | D | A | -2.8701 | |
| 408 | P | A | -1.7628 | |
| 409 | Y | A | -0.9853 | |
| 410 | K | A | -2.1044 | |
| 411 | G | A | -0.6374 | |
| 412 | L | A | 0.6778 | |
| 413 | I | A | 1.5954 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3722 | |
| 416 | E | A | -1.6463 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9402 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0633 | |
| 421 | E | A | -2.8044 | |
| 422 | R | A | -2.6775 | |
| 423 | F | A | -1.2919 | |
| 424 | S | A | -1.4574 | |
| 425 | Q | A | -1.8384 | |
| 426 | D | A | -2.8698 | |
| 427 | L | A | -1.9605 | |
| 428 | D | A | -2.7461 | |
| 429 | Q | A | -2.5962 | |
| 430 | F | A | -1.4096 | |
| 431 | A | A | -0.8886 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5676 | |
| 435 | K | A | -0.7119 | |
| 436 | F | A | 0.1515 | |
| 437 | L | A | 1.0326 | |
| 438 | Y | A | 0.8273 | |
| 439 | Q | A | -0.2782 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine