Project name: query_structure

Status: done

Started: 2026-03-16 22:56:09
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Chain sequence(s) A: AMHVAQPAVVLASSRGIASFVCEYAAGCKNFFWKTFTSCATEVRVTVLRQADSQVTEVCAATYMMGNELTFLDDSICTGTSSGNQVNLTIQGLRAMDTGLYICKVELMYPPPYYLGIGNGTQIYV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:46)
Show buried residues

Minimal score value
-2.5147
Maximal score value
2.7581
Average score
-0.153
Total score value
-19.1224

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.5807
2 M A 0.2027
3 H A -0.8006
4 V A 0.0000
5 A A -0.6688
6 Q A -0.3021
7 P A 0.1247
8 A A 0.4038
9 V A 1.7767
10 V A 1.7120
11 L A 2.3576
12 A A 0.9150
13 S A -0.0696
14 S A -0.8713
15 R A -2.0990
16 G A 0.0000
17 I A -0.3334
18 A A 0.0000
19 S A -0.0420
20 F A 0.0000
21 V A -0.3354
22 C A 0.0000
23 E A -1.5923
24 Y A 0.0000
25 A A -0.8670
26 A A -0.7643
27 G A -0.4550
28 C A -0.1961
29 K A -1.1397
30 N A 0.2391
31 F A 2.1612
32 F A 2.7581
33 W A 1.9547
34 K A 0.1923
35 T A 1.0536
36 F A 2.0161
37 T A 0.7249
38 S A 0.3506
39 C A 0.2781
40 A A 0.7041
41 T A 0.2330
42 E A -0.1014
43 V A 0.0000
44 R A -0.7453
45 V A 0.0000
46 T A 0.0000
47 V A 0.0000
48 L A -0.5435
49 R A -0.7651
50 Q A -1.2460
51 A A -1.1977
52 D A -2.2293
53 S A -1.5922
54 Q A -1.7419
55 V A -0.5867
56 T A -0.9279
57 E A -1.7167
58 V A -0.7644
59 C A 0.0000
60 A A -0.4685
61 A A 0.0000
62 T A -0.3226
63 Y A 0.0000
64 M A -0.4789
65 M A -0.7466
66 G A -1.4713
67 N A -2.3279
68 E A -2.5147
69 L A 0.0000
70 T A -0.5106
71 F A -0.1535
72 L A 0.3563
73 D A -1.7418
74 D A -2.1922
75 S A -1.1699
76 I A -0.5727
77 C A 0.0000
78 T A -0.6715
79 G A -0.7620
80 T A -1.3081
81 S A -1.5167
82 S A -1.5514
83 G A -1.1764
84 N A -1.1545
85 Q A -1.6132
86 V A 0.0000
87 N A -1.2837
88 L A 0.0000
89 T A -0.2633
90 I A 0.0000
91 Q A -0.9669
92 G A -1.2438
93 L A 0.0000
94 R A -1.2416
95 A A 0.2278
96 M A 0.7673
97 D A 0.0000
98 T A 0.5773
99 G A 0.0186
100 L A 0.1910
101 Y A 0.0000
102 I A 0.0000
103 C A 0.0000
104 K A -0.2956
105 V A 0.0000
106 E A 0.4204
107 L A 0.0000
108 M A 1.0168
109 Y A 1.3631
110 P A 0.6401
111 P A 0.5557
112 P A 0.6611
113 Y A 1.8364
114 Y A 1.6660
115 L A 1.0910
116 G A 0.0000
117 I A 0.7403
118 G A 0.0000
119 N A -1.1563
120 G A 0.0000
121 T A 0.0000
122 Q A 0.4760
123 I A 0.0000
124 Y A 1.8484
125 V A 1.2559
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Laboratory of Theory of Biopolymers 2018