| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGASRPLSSYSWAWFRQAPGQGLEAVAAIGGDGTTKIYHPAVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAGGGGPSEGKDYWGQGTLVTVS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:34)
[INFO] Main: Simulation completed successfully. (00:01:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.8259 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.2884 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.8981 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1980 | |
| 8 | G | H | -0.6828 | |
| 9 | G | H | 0.2320 | |
| 10 | G | H | 0.8900 | |
| 11 | L | H | 1.4539 | |
| 12 | V | H | -0.0754 | |
| 13 | Q | H | -1.4014 | |
| 14 | P | H | -1.9070 | |
| 15 | G | H | -1.7281 | |
| 16 | G | H | -1.2247 | |
| 17 | S | H | -1.4928 | |
| 18 | L | H | -0.8351 | |
| 19 | R | H | -1.7440 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.3446 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.2504 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.9547 | |
| 26 | G | H | -1.2920 | |
| 27 | A | H | -1.2032 | |
| 28 | S | H | -0.9968 | |
| 29 | R | H | -1.1669 | |
| 30 | P | H | -1.0718 | |
| 31 | L | H | 0.0000 | |
| 32 | S | H | -1.4810 | |
| 33 | S | H | -1.1038 | |
| 34 | Y | H | 0.0000 | |
| 35 | S | H | -0.8913 | |
| 36 | W | H | 0.0000 | |
| 37 | A | H | 0.3570 | |
| 38 | W | H | 0.0000 | |
| 39 | F | H | 0.4487 | |
| 40 | R | H | 0.0000 | |
| 41 | Q | H | -0.4333 | |
| 42 | A | H | -0.8686 | |
| 43 | P | H | -0.8816 | |
| 44 | G | H | -1.2535 | |
| 45 | Q | H | -1.7281 | |
| 46 | G | H | -0.9793 | |
| 47 | L | H | 0.0501 | |
| 48 | E | H | -0.4777 | |
| 49 | A | H | 0.2108 | |
| 50 | V | H | 0.0000 | |
| 51 | A | H | 0.0000 | |
| 52 | A | H | 0.4499 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | -0.8776 | |
| 55 | G | H | -1.4707 | |
| 56 | D | H | -2.1486 | |
| 57 | G | H | -1.5280 | |
| 58 | T | H | -0.7409 | |
| 59 | T | H | -0.4507 | |
| 60 | K | H | 0.0155 | |
| 61 | I | H | 1.3955 | |
| 62 | Y | H | 0.2147 | |
| 63 | H | H | -0.3940 | |
| 64 | P | H | -0.7408 | |
| 65 | A | H | -0.9423 | |
| 66 | V | H | 0.0000 | |
| 67 | K | H | -1.8305 | |
| 68 | G | H | -1.6935 | |
| 69 | R | H | -1.6737 | |
| 70 | F | H | 0.0000 | |
| 71 | T | H | -0.8222 | |
| 72 | I | H | 0.0000 | |
| 73 | S | H | -0.6543 | |
| 74 | R | H | -1.2550 | |
| 75 | D | H | -2.0106 | |
| 76 | N | H | -2.3893 | |
| 77 | S | H | -1.9510 | |
| 78 | K | H | -2.5848 | |
| 79 | N | H | -1.9630 | |
| 80 | T | H | 0.0000 | |
| 81 | L | H | 0.0000 | |
| 82 | Y | H | 0.0000 | |
| 83 | L | H | 0.0000 | |
| 84 | Q | H | -1.3565 | |
| 85 | M | H | 0.0000 | |
| 86 | N | H | -2.1794 | |
| 87 | S | H | -1.7532 | |
| 88 | L | H | 0.0000 | |
| 89 | R | H | -3.0405 | |
| 90 | A | H | -2.0547 | |
| 91 | E | H | -2.4560 | |
| 92 | D | H | 0.0000 | |
| 93 | T | H | -0.5134 | |
| 94 | A | H | 0.0000 | |
| 95 | V | H | 0.8974 | |
| 96 | Y | H | 0.0000 | |
| 97 | Y | H | 0.5649 | |
| 98 | C | H | 0.0000 | |
| 99 | A | H | 0.0000 | |
| 100 | A | H | 0.0000 | |
| 101 | G | H | -1.4098 | |
| 102 | G | H | -1.6333 | |
| 103 | G | H | -1.2353 | |
| 104 | G | H | -0.8692 | |
| 105 | P | H | -0.9955 | |
| 106 | S | H | -1.0306 | |
| 107 | E | H | -1.7533 | |
| 108 | G | H | -2.0342 | |
| 109 | K | H | -2.9041 | |
| 110 | D | H | -2.1904 | |
| 111 | Y | H | -1.0247 | |
| 112 | W | H | 0.2096 | |
| 113 | G | H | -0.0247 | |
| 114 | Q | H | -0.8336 | |
| 115 | G | H | 0.1523 | |
| 116 | T | H | 0.6093 | |
| 117 | L | H | 1.7181 | |
| 118 | V | H | 0.0000 | |
| 119 | T | H | 0.3023 | |
| 120 | V | H | 0.0000 | |
| 121 | S | H | -0.8715 |