| Chain sequence(s) |
A: NGAMLSEGGVPGIVAVFVVLELVIRRRPTTGTSVVWCGMVVLGLVVTGLVTIEGLCRYVVAVGILMSMELGPEIVALVLLQAVFDMRTGLLVAFAVKRAYTTREAVATYFLLLVLELGFPEASLSNIWKWADSLAMGALILQACGQEGRTRVGYLLAAMMTQKDMVIIHTGLTIFLSAATAMAVWSMIKGQRDQKGLSWATPLAGLLGGEGVGLRLLAFRKLAERRNRR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:44)
[INFO] Main: Simulation completed successfully. (00:04:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -0.9723 | |
| 2 | G | A | -0.5182 | |
| 3 | A | A | -0.0366 | |
| 4 | M | A | 0.6860 | |
| 5 | L | A | 1.1469 | |
| 6 | S | A | -0.0599 | |
| 7 | E | A | -1.0532 | |
| 8 | G | A | -0.0912 | |
| 9 | G | A | 0.9414 | |
| 10 | V | A | 1.7189 | |
| 11 | P | A | 0.8908 | |
| 12 | G | A | 1.1989 | |
| 13 | I | A | 2.3847 | |
| 14 | V | A | 3.1410 | |
| 15 | A | A | 2.0946 | |
| 16 | V | A | 0.0000 | |
| 17 | F | A | 2.6170 | |
| 18 | V | A | 2.8310 | |
| 19 | V | A | 1.9083 | |
| 20 | L | A | 0.0000 | |
| 21 | E | A | -0.5820 | |
| 22 | L | A | -0.2650 | |
| 23 | V | A | -0.0762 | |
| 24 | I | A | -1.1495 | |
| 25 | R | A | -2.8922 | |
| 26 | R | A | -3.3908 | |
| 27 | R | A | -3.0288 | |
| 28 | P | A | -1.2726 | |
| 29 | T | A | -0.9201 | |
| 30 | T | A | -0.3708 | |
| 31 | G | A | 0.5757 | |
| 32 | T | A | 1.0547 | |
| 33 | S | A | 0.9704 | |
| 34 | V | A | 2.8247 | |
| 35 | V | A | 3.1872 | |
| 36 | W | A | 2.9938 | |
| 37 | C | A | 2.4738 | |
| 38 | G | A | 2.2328 | |
| 39 | M | A | 2.5856 | |
| 40 | V | A | 2.2840 | |
| 41 | V | A | 2.4099 | |
| 42 | L | A | 2.7096 | |
| 43 | G | A | 1.7765 | |
| 44 | L | A | 1.6791 | |
| 45 | V | A | 2.4280 | |
| 46 | V | A | 2.3354 | |
| 47 | T | A | 1.1038 | |
| 48 | G | A | 0.8550 | |
| 49 | L | A | 0.7844 | |
| 50 | V | A | 0.0000 | |
| 51 | T | A | 0.6593 | |
| 52 | I | A | 1.2260 | |
| 53 | E | A | -0.6890 | |
| 54 | G | A | -0.0307 | |
| 55 | L | A | 1.3092 | |
| 56 | C | A | 1.2789 | |
| 57 | R | A | 0.2683 | |
| 58 | Y | A | 1.5601 | |
| 59 | V | A | 2.6147 | |
| 60 | V | A | 2.7493 | |
| 61 | A | A | 0.0000 | |
| 62 | V | A | 1.8665 | |
| 63 | G | A | 1.5094 | |
| 64 | I | A | 1.6070 | |
| 65 | L | A | 0.0000 | |
| 66 | M | A | 0.7387 | |
| 67 | S | A | 0.0405 | |
| 68 | M | A | -0.6341 | |
| 69 | E | A | -1.6865 | |
| 70 | L | A | 0.0000 | |
| 71 | G | A | -0.7951 | |
| 72 | P | A | -0.4392 | |
| 73 | E | A | -0.8494 | |
| 74 | I | A | 0.0000 | |
| 75 | V | A | 0.3134 | |
| 76 | A | A | 0.0210 | |
| 77 | L | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | L | A | 0.6573 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | 0.0000 | |
| 82 | A | A | -0.2094 | |
| 83 | V | A | 0.2284 | |
| 84 | F | A | -0.3593 | |
| 85 | D | A | -1.6443 | |
| 86 | M | A | 0.0000 | |
| 87 | R | A | -0.7896 | |
| 88 | T | A | 0.0000 | |
| 89 | G | A | 0.3173 | |
| 90 | L | A | 0.2331 | |
| 91 | L | A | 0.0000 | |
| 92 | V | A | 0.7471 | |
| 93 | A | A | 0.5042 | |
| 94 | F | A | 0.0000 | |
| 95 | A | A | 0.0000 | |
| 96 | V | A | 0.6897 | |
| 97 | K | A | -1.4863 | |
| 98 | R | A | -2.1857 | |
| 99 | A | A | -1.1376 | |
| 100 | Y | A | -1.1265 | |
| 101 | T | A | -0.9382 | |
| 102 | T | A | -1.1577 | |
| 103 | R | A | -2.2196 | |
| 104 | E | A | -1.5065 | |
| 105 | A | A | 0.0000 | |
| 106 | V | A | 0.0000 | |
| 107 | A | A | -0.1660 | |
| 108 | T | A | 0.3076 | |
| 109 | Y | A | 0.0000 | |
| 110 | F | A | 0.0000 | |
| 111 | L | A | 2.3050 | |
| 112 | L | A | 0.0000 | |
| 113 | L | A | 0.0000 | |
| 114 | V | A | 3.1411 | |
| 115 | L | A | 2.4310 | |
| 116 | E | A | 1.5509 | |
| 117 | L | A | 2.0677 | |
| 118 | G | A | 1.1144 | |
| 119 | F | A | 1.0123 | |
| 120 | P | A | -0.4222 | |
| 121 | E | A | -1.2919 | |
| 122 | A | A | -0.8947 | |
| 123 | S | A | -0.3891 | |
| 124 | L | A | -0.0653 | |
| 125 | S | A | -0.7551 | |
| 126 | N | A | -0.7140 | |
| 127 | I | A | 1.1450 | |
| 128 | W | A | 0.1034 | |
| 129 | K | A | -0.4694 | |
| 130 | W | A | 0.9710 | |
| 131 | A | A | 0.7115 | |
| 132 | D | A | 0.0000 | |
| 133 | S | A | 0.0000 | |
| 134 | L | A | 1.0485 | |
| 135 | A | A | 0.0000 | |
| 136 | M | A | 0.0000 | |
| 137 | G | A | 0.0000 | |
| 138 | A | A | 0.7185 | |
| 139 | L | A | 0.0000 | |
| 140 | I | A | 0.8958 | |
| 141 | L | A | 0.6335 | |
| 142 | Q | A | -0.3528 | |
| 143 | A | A | -0.4854 | |
| 144 | C | A | 0.0841 | |
| 145 | G | A | -0.9800 | |
| 146 | Q | A | -2.3713 | |
| 147 | E | A | -2.9299 | |
| 148 | G | A | -2.5674 | |
| 149 | R | A | -2.8230 | |
| 150 | T | A | -1.8800 | |
| 151 | R | A | -1.3162 | |
| 152 | V | A | -0.3152 | |
| 153 | G | A | 0.0000 | |
| 154 | Y | A | 0.0000 | |
| 155 | L | A | 0.7047 | |
| 156 | L | A | 0.8228 | |
| 157 | A | A | 0.0000 | |
| 158 | A | A | 0.0000 | |
| 159 | M | A | 0.3086 | |
| 160 | M | A | 0.0000 | |
| 161 | T | A | -1.0653 | |
| 162 | Q | A | 0.0000 | |
| 163 | K | A | -1.3040 | |
| 164 | D | A | -0.3617 | |
| 165 | M | A | 1.1226 | |
| 166 | V | A | 1.6211 | |
| 167 | I | A | 0.0000 | |
| 168 | I | A | 0.8468 | |
| 169 | H | A | 0.6029 | |
| 170 | T | A | 0.8061 | |
| 171 | G | A | 0.0000 | |
| 172 | L | A | 0.8785 | |
| 173 | T | A | 0.6674 | |
| 174 | I | A | 0.6731 | |
| 175 | F | A | 0.0000 | |
| 176 | L | A | 0.0000 | |
| 177 | S | A | 0.4356 | |
| 178 | A | A | 0.5603 | |
| 179 | A | A | 0.0000 | |
| 180 | T | A | 1.0903 | |
| 181 | A | A | 1.1987 | |
| 182 | M | A | 1.7372 | |
| 183 | A | A | 0.0000 | |
| 184 | V | A | 1.9455 | |
| 185 | W | A | 1.9520 | |
| 186 | S | A | 0.0993 | |
| 187 | M | A | 0.0792 | |
| 188 | I | A | 1.3575 | |
| 189 | K | A | -1.1165 | |
| 190 | G | A | -1.6431 | |
| 191 | Q | A | -2.5667 | |
| 192 | R | A | -3.4979 | |
| 193 | D | A | -3.0274 | |
| 194 | Q | A | -2.7048 | |
| 195 | K | A | -2.3146 | |
| 196 | G | A | 0.0000 | |
| 197 | L | A | 0.7861 | |
| 198 | S | A | 0.1362 | |
| 199 | W | A | 0.5433 | |
| 200 | A | A | 0.7531 | |
| 201 | T | A | 0.5250 | |
| 202 | P | A | 0.5791 | |
| 203 | L | A | 0.0000 | |
| 204 | A | A | 0.6196 | |
| 205 | G | A | 0.2422 | |
| 206 | L | A | 0.7221 | |
| 207 | L | A | 1.3312 | |
| 208 | G | A | 0.0926 | |
| 209 | G | A | -0.8610 | |
| 210 | E | A | -1.8243 | |
| 211 | G | A | -0.8979 | |
| 212 | V | A | 0.0088 | |
| 213 | G | A | 0.5813 | |
| 214 | L | A | 0.9795 | |
| 215 | R | A | -0.4858 | |
| 216 | L | A | 0.8087 | |
| 217 | L | A | 0.8889 | |
| 218 | A | A | 0.5918 | |
| 219 | F | A | 1.1393 | |
| 220 | R | A | -0.9483 | |
| 221 | K | A | -1.8024 | |
| 222 | L | A | -0.7490 | |
| 223 | A | A | -2.0569 | |
| 224 | E | A | -3.9211 | |
| 225 | R | A | -4.5294 | |
| 226 | R | A | -4.8456 | |
| 227 | N | A | -4.4357 | |
| 228 | R | A | -4.7883 | |
| 229 | R | A | -4.1837 |