Project name: KFDV_NS2A

Status: done

Started: 2026-05-19 17:48:06
Settings
Chain sequence(s) A: NGAMLSEGGVPGIVAVFVVLELVIRRRPTTGTSVVWCGMVVLGLVVTGLVTIEGLCRYVVAVGILMSMELGPEIVALVLLQAVFDMRTGLLVAFAVKRAYTTREAVATYFLLLVLELGFPEASLSNIWKWADSLAMGALILQACGQEGRTRVGYLLAAMMTQKDMVIIHTGLTIFLSAATAMAVWSMIKGQRDQKGLSWATPLAGLLGGEGVGLRLLAFRKLAERRNRR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:47)
Show buried residues

Minimal score value
-4.8456
Maximal score value
3.1872
Average score
0.0758
Total score value
17.3592

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -0.9723
2 G A -0.5182
3 A A -0.0366
4 M A 0.6860
5 L A 1.1469
6 S A -0.0599
7 E A -1.0532
8 G A -0.0912
9 G A 0.9414
10 V A 1.7189
11 P A 0.8908
12 G A 1.1989
13 I A 2.3847
14 V A 3.1410
15 A A 2.0946
16 V A 0.0000
17 F A 2.6170
18 V A 2.8310
19 V A 1.9083
20 L A 0.0000
21 E A -0.5820
22 L A -0.2650
23 V A -0.0762
24 I A -1.1495
25 R A -2.8922
26 R A -3.3908
27 R A -3.0288
28 P A -1.2726
29 T A -0.9201
30 T A -0.3708
31 G A 0.5757
32 T A 1.0547
33 S A 0.9704
34 V A 2.8247
35 V A 3.1872
36 W A 2.9938
37 C A 2.4738
38 G A 2.2328
39 M A 2.5856
40 V A 2.2840
41 V A 2.4099
42 L A 2.7096
43 G A 1.7765
44 L A 1.6791
45 V A 2.4280
46 V A 2.3354
47 T A 1.1038
48 G A 0.8550
49 L A 0.7844
50 V A 0.0000
51 T A 0.6593
52 I A 1.2260
53 E A -0.6890
54 G A -0.0307
55 L A 1.3092
56 C A 1.2789
57 R A 0.2683
58 Y A 1.5601
59 V A 2.6147
60 V A 2.7493
61 A A 0.0000
62 V A 1.8665
63 G A 1.5094
64 I A 1.6070
65 L A 0.0000
66 M A 0.7387
67 S A 0.0405
68 M A -0.6341
69 E A -1.6865
70 L A 0.0000
71 G A -0.7951
72 P A -0.4392
73 E A -0.8494
74 I A 0.0000
75 V A 0.3134
76 A A 0.0210
77 L A 0.0000
78 V A 0.0000
79 L A 0.6573
80 L A 0.0000
81 Q A 0.0000
82 A A -0.2094
83 V A 0.2284
84 F A -0.3593
85 D A -1.6443
86 M A 0.0000
87 R A -0.7896
88 T A 0.0000
89 G A 0.3173
90 L A 0.2331
91 L A 0.0000
92 V A 0.7471
93 A A 0.5042
94 F A 0.0000
95 A A 0.0000
96 V A 0.6897
97 K A -1.4863
98 R A -2.1857
99 A A -1.1376
100 Y A -1.1265
101 T A -0.9382
102 T A -1.1577
103 R A -2.2196
104 E A -1.5065
105 A A 0.0000
106 V A 0.0000
107 A A -0.1660
108 T A 0.3076
109 Y A 0.0000
110 F A 0.0000
111 L A 2.3050
112 L A 0.0000
113 L A 0.0000
114 V A 3.1411
115 L A 2.4310
116 E A 1.5509
117 L A 2.0677
118 G A 1.1144
119 F A 1.0123
120 P A -0.4222
121 E A -1.2919
122 A A -0.8947
123 S A -0.3891
124 L A -0.0653
125 S A -0.7551
126 N A -0.7140
127 I A 1.1450
128 W A 0.1034
129 K A -0.4694
130 W A 0.9710
131 A A 0.7115
132 D A 0.0000
133 S A 0.0000
134 L A 1.0485
135 A A 0.0000
136 M A 0.0000
137 G A 0.0000
138 A A 0.7185
139 L A 0.0000
140 I A 0.8958
141 L A 0.6335
142 Q A -0.3528
143 A A -0.4854
144 C A 0.0841
145 G A -0.9800
146 Q A -2.3713
147 E A -2.9299
148 G A -2.5674
149 R A -2.8230
150 T A -1.8800
151 R A -1.3162
152 V A -0.3152
153 G A 0.0000
154 Y A 0.0000
155 L A 0.7047
156 L A 0.8228
157 A A 0.0000
158 A A 0.0000
159 M A 0.3086
160 M A 0.0000
161 T A -1.0653
162 Q A 0.0000
163 K A -1.3040
164 D A -0.3617
165 M A 1.1226
166 V A 1.6211
167 I A 0.0000
168 I A 0.8468
169 H A 0.6029
170 T A 0.8061
171 G A 0.0000
172 L A 0.8785
173 T A 0.6674
174 I A 0.6731
175 F A 0.0000
176 L A 0.0000
177 S A 0.4356
178 A A 0.5603
179 A A 0.0000
180 T A 1.0903
181 A A 1.1987
182 M A 1.7372
183 A A 0.0000
184 V A 1.9455
185 W A 1.9520
186 S A 0.0993
187 M A 0.0792
188 I A 1.3575
189 K A -1.1165
190 G A -1.6431
191 Q A -2.5667
192 R A -3.4979
193 D A -3.0274
194 Q A -2.7048
195 K A -2.3146
196 G A 0.0000
197 L A 0.7861
198 S A 0.1362
199 W A 0.5433
200 A A 0.7531
201 T A 0.5250
202 P A 0.5791
203 L A 0.0000
204 A A 0.6196
205 G A 0.2422
206 L A 0.7221
207 L A 1.3312
208 G A 0.0926
209 G A -0.8610
210 E A -1.8243
211 G A -0.8979
212 V A 0.0088
213 G A 0.5813
214 L A 0.9795
215 R A -0.4858
216 L A 0.8087
217 L A 0.8889
218 A A 0.5918
219 F A 1.1393
220 R A -0.9483
221 K A -1.8024
222 L A -0.7490
223 A A -2.0569
224 E A -3.9211
225 R A -4.5294
226 R A -4.8456
227 N A -4.4357
228 R A -4.7883
229 R A -4.1837
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Laboratory of Theory of Biopolymers 2018