| Chain sequence(s) |
A: GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSWDERTKEEVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVEASEWWQRERFSCSVMHEALHNHYTQKSLWRSPGK
B: GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSWDERTKEEVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVEASEWWQRERFSCSVMHEALHNHYTQKSLWRSPGK input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:00)
[INFO] Main: Simulation completed successfully. (00:06:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.9059 | |
| 2 | P | A | 0.0000 | |
| 3 | S | A | -0.2079 | |
| 4 | V | A | 0.0000 | |
| 5 | F | A | 1.0689 | |
| 6 | L | A | 0.8244 | |
| 7 | F | A | 1.1567 | |
| 8 | P | A | -0.0902 | |
| 9 | P | A | 0.0000 | |
| 10 | K | A | -2.0367 | |
| 11 | P | A | -1.3090 | |
| 12 | K | A | -1.0610 | |
| 13 | D | A | -1.0764 | |
| 14 | T | A | 0.0000 | |
| 15 | L | A | 0.0000 | |
| 16 | M | A | 0.3805 | |
| 17 | I | A | 1.5579 | |
| 18 | S | A | 0.2608 | |
| 19 | R | A | -0.8389 | |
| 20 | T | A | -0.4492 | |
| 21 | P | A | 0.0000 | |
| 22 | E | A | -0.6237 | |
| 23 | V | A | 0.0000 | |
| 24 | T | A | 0.3408 | |
| 25 | C | A | 0.0000 | |
| 26 | V | A | 0.0000 | |
| 27 | V | A | 0.0000 | |
| 28 | V | A | 0.0000 | |
| 29 | D | A | -1.7930 | |
| 30 | V | A | 0.0000 | |
| 31 | S | A | -2.2363 | |
| 32 | H | A | -2.6498 | |
| 33 | E | A | -2.9662 | |
| 34 | D | A | -2.5815 | |
| 35 | P | A | -2.7303 | |
| 36 | E | A | -3.0995 | |
| 37 | V | A | -1.9923 | |
| 38 | K | A | -2.2476 | |
| 39 | F | A | -1.1842 | |
| 40 | N | A | -1.1772 | |
| 41 | W | A | 0.0000 | |
| 42 | Y | A | -0.6301 | |
| 43 | V | A | -0.8255 | |
| 44 | D | A | -2.0501 | |
| 45 | G | A | -0.8679 | |
| 46 | V | A | 0.5798 | |
| 47 | E | A | -0.7154 | |
| 48 | V | A | -0.5559 | |
| 49 | H | A | -1.8808 | |
| 50 | N | A | -2.1637 | |
| 51 | A | A | -1.8507 | |
| 52 | K | A | -2.4518 | |
| 53 | T | A | -2.0612 | |
| 54 | K | A | -2.7059 | |
| 55 | P | A | -2.5593 | |
| 56 | R | A | -3.6133 | |
| 57 | E | A | -3.7990 | |
| 58 | E | A | -3.4271 | |
| 59 | Q | A | -1.6488 | |
| 60 | Y | A | 0.2543 | |
| 61 | N | A | -0.6352 | |
| 62 | S | A | -0.9561 | |
| 63 | T | A | -2.0218 | |
| 64 | Y | A | 0.0000 | |
| 65 | R | A | -2.6510 | |
| 66 | V | A | 0.0000 | |
| 67 | V | A | -1.0596 | |
| 68 | S | A | 0.0000 | |
| 69 | V | A | 0.0000 | |
| 70 | L | A | 0.0000 | |
| 71 | T | A | -0.4692 | |
| 72 | V | A | 0.0000 | |
| 73 | L | A | 0.6859 | |
| 74 | H | A | -0.0819 | |
| 75 | Q | A | -1.1322 | |
| 76 | D | A | -1.2298 | |
| 77 | W | A | 0.0000 | |
| 78 | L | A | -0.9797 | |
| 79 | N | A | -2.0601 | |
| 80 | G | A | -2.0677 | |
| 81 | K | A | -2.0989 | |
| 82 | E | A | -1.9314 | |
| 83 | Y | A | 0.0000 | |
| 84 | K | A | -1.6533 | |
| 85 | C | A | 0.0000 | |
| 86 | K | A | -1.6549 | |
| 87 | V | A | 0.0000 | |
| 88 | S | A | -1.4988 | |
| 89 | N | A | 0.0000 | |
| 90 | K | A | -2.5742 | |
| 91 | A | A | -1.4464 | |
| 92 | L | A | -0.6115 | |
| 93 | P | A | -0.5092 | |
| 94 | A | A | -0.4387 | |
| 95 | P | A | -0.9125 | |
| 96 | I | A | -0.7224 | |
| 97 | E | A | -2.1580 | |
| 98 | K | A | -1.3590 | |
| 99 | T | A | -1.0240 | |
| 100 | I | A | -0.1636 | |
| 101 | S | A | -1.0829 | |
| 102 | K | A | -1.2403 | |
| 103 | A | A | -1.1606 | |
| 104 | K | A | -2.3503 | |
| 105 | G | A | -1.9604 | |
| 106 | Q | A | -2.0984 | |
| 107 | P | A | -1.6949 | |
| 108 | R | A | -1.8966 | |
| 109 | E | A | -2.5081 | |
| 110 | P | A | 0.0000 | |
| 111 | Q | A | -1.1210 | |
| 112 | V | A | 0.0000 | |
| 113 | Y | A | 0.0000 | |
| 114 | T | A | -0.1685 | |
| 115 | L | A | 0.0000 | |
| 116 | P | A | -0.1040 | |
| 117 | P | A | -0.4338 | |
| 118 | S | A | -0.1078 | |
| 119 | W | A | 0.2758 | |
| 120 | D | A | -1.0715 | |
| 121 | E | A | 0.0000 | |
| 122 | R | A | -1.5930 | |
| 123 | T | A | -1.4775 | |
| 124 | K | A | -2.6356 | |
| 125 | E | A | -3.4541 | |
| 126 | E | A | -3.5196 | |
| 127 | V | A | 0.0000 | |
| 128 | S | A | 0.0000 | |
| 129 | L | A | 0.0000 | |
| 130 | T | A | 0.0000 | |
| 131 | C | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | V | A | 0.0000 | |
| 134 | K | A | 0.0000 | |
| 135 | G | A | -0.8406 | |
| 136 | F | A | 0.0000 | |
| 137 | Y | A | -0.9127 | |
| 138 | P | A | 0.0000 | |
| 139 | S | A | -0.0606 | |
| 140 | D | A | -0.9661 | |
| 141 | I | A | -0.5076 | |
| 142 | A | A | 0.0000 | |
| 143 | V | A | 0.0000 | |
| 144 | E | A | -1.2025 | |
| 145 | W | A | 0.0000 | |
| 146 | E | A | -2.1601 | |
| 147 | S | A | -2.2149 | |
| 148 | N | A | -2.6095 | |
| 149 | G | A | -2.0831 | |
| 150 | Q | A | -2.3268 | |
| 151 | P | A | -2.0277 | |
| 152 | E | A | -2.0988 | |
| 153 | N | A | -2.2455 | |
| 154 | N | A | -1.6421 | |
| 155 | Y | A | -1.1973 | |
| 156 | K | A | -0.9466 | |
| 157 | T | A | -0.3320 | |
| 158 | T | A | 0.0000 | |
| 159 | P | A | -0.0915 | |
| 160 | P | A | 0.2685 | |
| 161 | V | A | 0.7315 | |
| 162 | L | A | 1.1269 | |
| 163 | D | A | -0.2881 | |
| 164 | S | A | -1.0663 | |
| 165 | D | A | -1.8351 | |
| 166 | G | A | -0.7847 | |
| 167 | S | A | 0.0000 | |
| 168 | F | A | 0.3835 | |
| 169 | F | A | 0.0000 | |
| 170 | L | A | 0.0000 | |
| 171 | Y | A | 0.0000 | |
| 172 | S | A | 0.0000 | |
| 173 | K | A | 0.0000 | |
| 174 | L | A | 0.0000 | |
| 175 | T | A | -1.2530 | |
| 176 | V | A | 0.0000 | |
| 177 | E | A | -3.2701 | |
| 178 | A | A | 0.0000 | |
| 179 | S | A | -2.3431 | |
| 180 | E | A | -3.0283 | |
| 181 | W | A | 0.0000 | |
| 182 | W | A | -1.6685 | |
| 183 | Q | A | -2.7124 | |
| 184 | R | A | -3.5084 | |
| 185 | E | A | -3.3465 | |
| 186 | R | A | -3.2575 | |
| 187 | F | A | 0.0000 | |
| 188 | S | A | -1.3632 | |
| 189 | C | A | 0.0000 | |
| 190 | S | A | 0.0000 | |
| 191 | V | A | 0.0000 | |
| 192 | M | A | 0.0000 | |
| 193 | H | A | 0.0000 | |
| 194 | E | A | -1.0057 | |
| 195 | A | A | -1.4573 | |
| 196 | L | A | -1.3888 | |
| 197 | H | A | -1.7490 | |
| 198 | N | A | -1.6609 | |
| 199 | H | A | -1.1367 | |
| 200 | Y | A | -0.3859 | |
| 201 | T | A | -0.6516 | |
| 202 | Q | A | -0.9541 | |
| 203 | K | A | -0.8520 | |
| 204 | S | A | -0.7728 | |
| 205 | L | A | 0.0000 | |
| 206 | W | A | -1.4082 | |
| 207 | R | A | -2.0325 | |
| 208 | S | A | -1.2032 | |
| 209 | P | A | -1.3908 | |
| 210 | G | A | -1.6139 | |
| 211 | K | A | -2.2958 | |
| 1 | G | B | -0.8808 | |
| 2 | P | B | 0.0000 | |
| 3 | S | B | -0.1782 | |
| 4 | V | B | 0.0000 | |
| 5 | F | B | 1.0290 | |
| 6 | L | B | 0.8021 | |
| 7 | F | B | 1.0980 | |
| 8 | P | B | -0.1859 | |
| 9 | P | B | 0.0000 | |
| 10 | K | B | -2.2610 | |
| 11 | P | B | -1.4060 | |
| 12 | K | B | -1.3474 | |
| 13 | D | B | -1.4479 | |
| 14 | T | B | 0.0000 | |
| 15 | L | B | 0.0000 | |
| 16 | M | B | 0.1406 | |
| 17 | I | B | 1.3094 | |
| 18 | S | B | -0.0646 | |
| 19 | R | B | -1.5892 | |
| 20 | T | B | -0.8977 | |
| 21 | P | B | 0.0000 | |
| 22 | E | B | -1.0566 | |
| 23 | V | B | 0.0000 | |
| 24 | T | B | 0.2861 | |
| 25 | C | B | 0.0000 | |
| 26 | V | B | 0.0000 | |
| 27 | V | B | 0.0000 | |
| 28 | V | B | -0.9821 | |
| 29 | D | B | -1.7444 | |
| 30 | V | B | 0.0000 | |
| 31 | S | B | -2.1488 | |
| 32 | H | B | -2.6418 | |
| 33 | E | B | -2.9602 | |
| 34 | D | B | -2.5739 | |
| 35 | P | B | -2.7363 | |
| 36 | E | B | -3.0882 | |
| 37 | V | B | -1.9985 | |
| 38 | K | B | -2.2401 | |
| 39 | F | B | -1.1739 | |
| 40 | N | B | -1.1732 | |
| 41 | W | B | 0.0000 | |
| 42 | Y | B | -0.6163 | |
| 43 | V | B | -0.8185 | |
| 44 | D | B | -2.0188 | |
| 45 | G | B | -0.8476 | |
| 46 | V | B | 0.6004 | |
| 47 | E | B | -0.6857 | |
| 48 | V | B | -0.5465 | |
| 49 | H | B | -1.8872 | |
| 50 | N | B | -2.1558 | |
| 51 | A | B | -1.8236 | |
| 52 | K | B | -2.3486 | |
| 53 | T | B | -1.8121 | |
| 54 | K | B | -2.2186 | |
| 55 | P | B | -2.3349 | |
| 56 | R | B | -3.4893 | |
| 57 | E | B | -3.7411 | |
| 58 | E | B | -3.4331 | |
| 59 | Q | B | -1.6499 | |
| 60 | Y | B | 0.2536 | |
| 61 | N | B | -0.6392 | |
| 62 | S | B | -0.9554 | |
| 63 | T | B | -2.0140 | |
| 64 | Y | B | 0.0000 | |
| 65 | R | B | -2.6707 | |
| 66 | V | B | 0.0000 | |
| 67 | V | B | -0.9087 | |
| 68 | S | B | 0.0000 | |
| 69 | V | B | -0.7514 | |
| 70 | L | B | 0.0000 | |
| 71 | T | B | -0.6136 | |
| 72 | V | B | 0.0000 | |
| 73 | L | B | 0.5453 | |
| 74 | H | B | -0.2816 | |
| 75 | Q | B | -1.2452 | |
| 76 | D | B | -1.3075 | |
| 77 | W | B | 0.0000 | |
| 78 | L | B | -1.0077 | |
| 79 | N | B | -2.0967 | |
| 80 | G | B | -2.0799 | |
| 81 | K | B | -2.1336 | |
| 82 | E | B | -2.0182 | |
| 83 | Y | B | 0.0000 | |
| 84 | K | B | -1.6556 | |
| 85 | C | B | 0.0000 | |
| 86 | K | B | -1.6582 | |
| 87 | V | B | 0.0000 | |
| 88 | S | B | -1.4863 | |
| 89 | N | B | 0.0000 | |
| 90 | K | B | -2.5678 | |
| 91 | A | B | -1.4407 | |
| 92 | L | B | -0.6049 | |
| 93 | P | B | -0.5052 | |
| 94 | A | B | -0.4361 | |
| 95 | P | B | -0.9060 | |
| 96 | I | B | -0.7304 | |
| 97 | E | B | -2.1933 | |
| 98 | K | B | -1.3895 | |
| 99 | T | B | -1.0673 | |
| 100 | I | B | -0.1965 | |
| 101 | S | B | -1.1114 | |
| 102 | K | B | -1.2598 | |
| 103 | A | B | -1.1646 | |
| 104 | K | B | -2.3479 | |
| 105 | G | B | -1.9610 | |
| 106 | Q | B | -2.1041 | |
| 107 | P | B | -1.7047 | |
| 108 | R | B | -1.9443 | |
| 109 | E | B | -2.5528 | |
| 110 | P | B | 0.0000 | |
| 111 | Q | B | -1.2255 | |
| 112 | V | B | 0.0000 | |
| 113 | Y | B | 0.0000 | |
| 114 | T | B | -0.1619 | |
| 115 | L | B | 0.0000 | |
| 116 | P | B | -0.1010 | |
| 117 | P | B | -0.4000 | |
| 118 | S | B | -0.1040 | |
| 119 | W | B | 0.2774 | |
| 120 | D | B | -1.0300 | |
| 121 | E | B | 0.0000 | |
| 122 | R | B | -1.5637 | |
| 123 | T | B | -1.4186 | |
| 124 | K | B | -2.4663 | |
| 125 | E | B | -3.2765 | |
| 126 | E | B | -3.2030 | |
| 127 | V | B | 0.0000 | |
| 128 | S | B | 0.0000 | |
| 129 | L | B | 0.0000 | |
| 130 | T | B | 0.0000 | |
| 131 | C | B | 0.0000 | |
| 132 | L | B | 0.0000 | |
| 133 | V | B | 0.0000 | |
| 134 | K | B | -0.4823 | |
| 135 | G | B | -0.9630 | |
| 136 | F | B | 0.0000 | |
| 137 | Y | B | -0.9582 | |
| 138 | P | B | 0.0000 | |
| 139 | S | B | -0.1003 | |
| 140 | D | B | -1.0370 | |
| 141 | I | B | -0.5587 | |
| 142 | A | B | 0.0000 | |
| 143 | V | B | 0.0000 | |
| 144 | E | B | -1.2352 | |
| 145 | W | B | 0.0000 | |
| 146 | E | B | -2.1432 | |
| 147 | S | B | -2.1867 | |
| 148 | N | B | -2.5942 | |
| 149 | G | B | -2.0745 | |
| 150 | Q | B | -2.3186 | |
| 151 | P | B | -2.0229 | |
| 152 | E | B | -2.0842 | |
| 153 | N | B | -2.2084 | |
| 154 | N | B | -1.5714 | |
| 155 | Y | B | -1.0947 | |
| 156 | K | B | -0.7402 | |
| 157 | T | B | -0.2381 | |
| 158 | T | B | 0.0000 | |
| 159 | P | B | -0.0878 | |
| 160 | P | B | 0.2121 | |
| 161 | V | B | 0.6215 | |
| 162 | L | B | 0.9911 | |
| 163 | D | B | -0.4166 | |
| 164 | S | B | -1.1274 | |
| 165 | D | B | -1.8508 | |
| 166 | G | B | -0.8095 | |
| 167 | S | B | 0.0000 | |
| 168 | F | B | 0.2839 | |
| 169 | F | B | 0.0000 | |
| 170 | L | B | 0.0000 | |
| 171 | Y | B | 0.0000 | |
| 172 | S | B | 0.0000 | |
| 173 | K | B | 0.0000 | |
| 174 | L | B | 0.0000 | |
| 175 | T | B | -1.1432 | |
| 176 | V | B | 0.0000 | |
| 177 | E | B | -3.1401 | |
| 178 | A | B | 0.0000 | |
| 179 | S | B | -2.0951 | |
| 180 | E | B | -2.8360 | |
| 181 | W | B | 0.0000 | |
| 182 | W | B | -1.3751 | |
| 183 | Q | B | -2.3238 | |
| 184 | R | B | -2.7043 | |
| 185 | E | B | -2.9515 | |
| 186 | R | B | -3.0315 | |
| 187 | F | B | 0.0000 | |
| 188 | S | B | 0.0000 | |
| 189 | C | B | 0.0000 | |
| 190 | S | B | 0.0000 | |
| 191 | V | B | 0.0000 | |
| 192 | M | B | 0.0000 | |
| 193 | H | B | 0.0000 | |
| 194 | E | B | -1.0163 | |
| 195 | A | B | -1.4585 | |
| 196 | L | B | -1.3961 | |
| 197 | H | B | -1.7465 | |
| 198 | N | B | -1.6538 | |
| 199 | H | B | -1.1447 | |
| 200 | Y | B | -0.3772 | |
| 201 | T | B | -0.6493 | |
| 202 | Q | B | -0.9351 | |
| 203 | K | B | -0.8102 | |
| 204 | S | B | -0.7121 | |
| 205 | L | B | 0.0000 | |
| 206 | W | B | -1.1524 | |
| 207 | R | B | -1.7334 | |
| 208 | S | B | -1.0507 | |
| 209 | P | B | -1.2611 | |
| 210 | G | B | -1.6131 | |
| 211 | K | B | -2.2975 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine