| Chain sequence(s) |
A: FSRPGLPVEYLQVPSPSMGRDIKVQFQSGGNNSPAVYLLDGLRAQDDYNGWDINTPAFEWYYQSGLSIVMPVGGQSSFYSDWYSPACGKAGCQTYKWETFLTSELPQWLSANRAVKPTGSAAIGLSMAGSSAMILAAYHPQQFIYAGSLSALLDPSQGMGPSLIGLAMGDAGGYKAADMWGPSSDPAWERNDPTQQIPKLVANNTRLWVYCGNGTPNELGGANIPAEFLENFVRSSNLKFQDAYNAAGGHNAVFNFPPNGTHSWEYWGAQLNAMKGDLQSSLGAGKESGSVSSEQLAQFRSLDFAVTNDGVI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:19)
[INFO] Main: Simulation completed successfully. (00:02:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.4219 | |
| 2 | S | A | -0.1817 | |
| 3 | R | A | -1.6627 | |
| 4 | P | A | -1.1208 | |
| 5 | G | A | -1.0191 | |
| 6 | L | A | -0.7067 | |
| 7 | P | A | -0.3584 | |
| 8 | V | A | -0.1768 | |
| 9 | E | A | -0.2405 | |
| 10 | Y | A | 0.6149 | |
| 11 | L | A | 0.0000 | |
| 12 | Q | A | -1.8781 | |
| 13 | V | A | 0.0000 | |
| 14 | P | A | -1.6408 | |
| 15 | S | A | 0.0000 | |
| 16 | P | A | -1.0008 | |
| 17 | S | A | -0.6934 | |
| 18 | M | A | 0.0000 | |
| 19 | G | A | -1.3622 | |
| 20 | R | A | -2.0218 | |
| 21 | D | A | -2.7758 | |
| 22 | I | A | 0.0000 | |
| 23 | K | A | -1.6629 | |
| 24 | V | A | 0.0000 | |
| 25 | Q | A | 0.0000 | |
| 26 | F | A | 0.0000 | |
| 27 | Q | A | 0.0000 | |
| 28 | S | A | -0.9060 | |
| 29 | G | A | -1.1030 | |
| 30 | G | A | -1.6651 | |
| 31 | N | A | -2.4323 | |
| 32 | N | A | -2.4531 | |
| 33 | S | A | 0.0000 | |
| 34 | P | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | V | A | 0.0000 | |
| 37 | Y | A | 0.0000 | |
| 38 | L | A | 0.0000 | |
| 39 | L | A | 0.0000 | |
| 40 | D | A | 0.0000 | |
| 41 | G | A | 0.0000 | |
| 42 | L | A | -1.0811 | |
| 43 | R | A | -2.4706 | |
| 44 | A | A | 0.0000 | |
| 45 | Q | A | -2.3686 | |
| 46 | D | A | -2.9346 | |
| 47 | D | A | -2.0134 | |
| 48 | Y | A | -0.4080 | |
| 49 | N | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | W | A | 0.0000 | |
| 52 | D | A | 0.0000 | |
| 53 | I | A | 0.9496 | |
| 54 | N | A | 0.0272 | |
| 55 | T | A | 0.0000 | |
| 56 | P | A | -0.2161 | |
| 57 | A | A | 0.0000 | |
| 58 | F | A | 0.0000 | |
| 59 | E | A | -0.8145 | |
| 60 | W | A | -0.4005 | |
| 61 | Y | A | 0.0000 | |
| 62 | Y | A | -0.2101 | |
| 63 | Q | A | -1.1593 | |
| 64 | S | A | 0.0000 | |
| 65 | G | A | -1.4881 | |
| 66 | L | A | 0.0000 | |
| 67 | S | A | 0.0000 | |
| 68 | I | A | 0.0000 | |
| 69 | V | A | 0.0000 | |
| 70 | M | A | 0.0000 | |
| 71 | P | A | 0.0000 | |
| 72 | V | A | 0.0000 | |
| 73 | G | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | Q | A | -1.4149 | |
| 76 | S | A | 0.0000 | |
| 77 | S | A | 0.0000 | |
| 78 | F | A | 0.0000 | |
| 79 | Y | A | 0.0000 | |
| 80 | S | A | 0.0000 | |
| 81 | D | A | -0.5971 | |
| 82 | W | A | 0.0000 | |
| 83 | Y | A | 0.9583 | |
| 84 | S | A | 0.1095 | |
| 85 | P | A | -0.2932 | |
| 86 | A | A | 0.0000 | |
| 87 | C | A | -0.5337 | |
| 88 | G | A | -1.5268 | |
| 89 | K | A | -1.9732 | |
| 90 | A | A | -0.8407 | |
| 91 | G | A | -0.5199 | |
| 92 | C | A | 0.1118 | |
| 93 | Q | A | -0.4680 | |
| 94 | T | A | -0.4381 | |
| 95 | Y | A | 0.0000 | |
| 96 | K | A | -0.8356 | |
| 97 | W | A | 0.0000 | |
| 98 | E | A | 0.0000 | |
| 99 | T | A | -0.4645 | |
| 100 | F | A | 0.0000 | |
| 101 | L | A | 0.0000 | |
| 102 | T | A | -0.3373 | |
| 103 | S | A | -0.5634 | |
| 104 | E | A | -0.7140 | |
| 105 | L | A | 0.0000 | |
| 106 | P | A | 0.0000 | |
| 107 | Q | A | -1.4823 | |
| 108 | W | A | -0.8825 | |
| 109 | L | A | 0.0000 | |
| 110 | S | A | -1.3386 | |
| 111 | A | A | -0.8972 | |
| 112 | N | A | -1.3457 | |
| 113 | R | A | -1.6681 | |
| 114 | A | A | -1.6634 | |
| 115 | V | A | 0.0000 | |
| 116 | K | A | -1.3703 | |
| 117 | P | A | -0.9517 | |
| 118 | T | A | -0.6575 | |
| 119 | G | A | -0.3064 | |
| 120 | S | A | 0.0000 | |
| 121 | A | A | 0.0000 | |
| 122 | A | A | 0.0000 | |
| 123 | I | A | 0.0000 | |
| 124 | G | A | 0.0000 | |
| 125 | L | A | 0.0000 | |
| 126 | S | A | -0.0943 | |
| 127 | M | A | 0.0000 | |
| 128 | A | A | 0.0000 | |
| 129 | G | A | 0.0000 | |
| 130 | S | A | 0.0000 | |
| 131 | S | A | 0.0000 | |
| 132 | A | A | 0.0000 | |
| 133 | M | A | 0.0000 | |
| 134 | I | A | 0.0000 | |
| 135 | L | A | 0.0000 | |
| 136 | A | A | 0.0000 | |
| 137 | A | A | 0.0000 | |
| 138 | Y | A | -0.2537 | |
| 139 | H | A | -0.4087 | |
| 140 | P | A | -0.8500 | |
| 141 | Q | A | -1.1989 | |
| 142 | Q | A | 0.0000 | |
| 143 | F | A | 0.0000 | |
| 144 | I | A | -0.0730 | |
| 145 | Y | A | 0.0000 | |
| 146 | A | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | S | A | 0.0000 | |
| 149 | L | A | 0.0000 | |
| 150 | S | A | 0.0000 | |
| 151 | A | A | 0.0000 | |
| 152 | L | A | 0.1882 | |
| 153 | L | A | 0.0000 | |
| 154 | D | A | -1.0391 | |
| 155 | P | A | 0.0000 | |
| 156 | S | A | -1.1756 | |
| 157 | Q | A | -1.2632 | |
| 158 | G | A | -0.4630 | |
| 159 | M | A | 0.5230 | |
| 160 | G | A | 0.0000 | |
| 161 | P | A | 0.0191 | |
| 162 | S | A | 0.4189 | |
| 163 | L | A | 0.8927 | |
| 164 | I | A | 0.0000 | |
| 165 | G | A | -0.0719 | |
| 166 | L | A | 0.6873 | |
| 167 | A | A | -0.3535 | |
| 168 | M | A | 0.0000 | |
| 169 | G | A | -1.4411 | |
| 170 | D | A | -2.1915 | |
| 171 | A | A | 0.0000 | |
| 172 | G | A | -1.8723 | |
| 173 | G | A | -1.8250 | |
| 174 | Y | A | 0.0000 | |
| 175 | K | A | -1.9056 | |
| 176 | A | A | -0.8627 | |
| 177 | A | A | -0.6516 | |
| 178 | D | A | -0.4598 | |
| 179 | M | A | 0.0000 | |
| 180 | W | A | 0.0000 | |
| 181 | G | A | 0.0000 | |
| 182 | P | A | -0.6200 | |
| 183 | S | A | -0.8267 | |
| 184 | S | A | -0.7808 | |
| 185 | D | A | -0.9964 | |
| 186 | P | A | -1.0330 | |
| 187 | A | A | -0.7246 | |
| 188 | W | A | 0.0000 | |
| 189 | E | A | -1.9073 | |
| 190 | R | A | -1.3896 | |
| 191 | N | A | 0.0000 | |
| 192 | D | A | 0.0000 | |
| 193 | P | A | 0.0000 | |
| 194 | T | A | -1.3791 | |
| 195 | Q | A | -1.7000 | |
| 196 | Q | A | 0.0000 | |
| 197 | I | A | 0.0000 | |
| 198 | P | A | -1.0132 | |
| 199 | K | A | -1.2633 | |
| 200 | L | A | 0.0000 | |
| 201 | V | A | -1.2285 | |
| 202 | A | A | -0.9145 | |
| 203 | N | A | -1.4541 | |
| 204 | N | A | -1.6743 | |
| 205 | T | A | 0.0000 | |
| 206 | R | A | -0.6520 | |
| 207 | L | A | 0.0000 | |
| 208 | W | A | 0.0000 | |
| 209 | V | A | 0.0000 | |
| 210 | Y | A | 0.0000 | |
| 211 | C | A | 0.0000 | |
| 212 | G | A | 0.0000 | |
| 213 | N | A | -0.7231 | |
| 214 | G | A | 0.0000 | |
| 215 | T | A | -0.5313 | |
| 216 | P | A | -1.0514 | |
| 217 | N | A | -1.3101 | |
| 218 | E | A | -1.7705 | |
| 219 | L | A | -0.6541 | |
| 220 | G | A | -0.8822 | |
| 221 | G | A | -0.6682 | |
| 222 | A | A | -0.4404 | |
| 223 | N | A | 0.0477 | |
| 224 | I | A | 1.8457 | |
| 225 | P | A | 1.0660 | |
| 226 | A | A | 0.0000 | |
| 227 | E | A | 0.5052 | |
| 228 | F | A | 1.9009 | |
| 229 | L | A | 1.2749 | |
| 230 | E | A | 0.0000 | |
| 231 | N | A | -0.6376 | |
| 232 | F | A | 0.2822 | |
| 233 | V | A | 0.0000 | |
| 234 | R | A | -0.6046 | |
| 235 | S | A | -0.7293 | |
| 236 | S | A | 0.0000 | |
| 237 | N | A | 0.0000 | |
| 238 | L | A | -0.6968 | |
| 239 | K | A | -2.1947 | |
| 240 | F | A | 0.0000 | |
| 241 | Q | A | -1.7484 | |
| 242 | D | A | -2.7346 | |
| 243 | A | A | -1.9113 | |
| 244 | Y | A | 0.0000 | |
| 245 | N | A | -2.4781 | |
| 246 | A | A | -1.3577 | |
| 247 | A | A | -1.0054 | |
| 248 | G | A | -1.1523 | |
| 249 | G | A | -1.7694 | |
| 250 | H | A | -1.6869 | |
| 251 | N | A | -1.2994 | |
| 252 | A | A | -0.5660 | |
| 253 | V | A | 0.2086 | |
| 254 | F | A | 0.4823 | |
| 255 | N | A | 0.1500 | |
| 256 | F | A | 0.1712 | |
| 257 | P | A | -0.2807 | |
| 258 | P | A | -0.5945 | |
| 259 | N | A | -0.8732 | |
| 260 | G | A | 0.0000 | |
| 261 | T | A | 0.0000 | |
| 262 | H | A | -0.3502 | |
| 263 | S | A | -0.4944 | |
| 264 | W | A | -0.4007 | |
| 265 | E | A | -1.0704 | |
| 266 | Y | A | 0.0000 | |
| 267 | W | A | 0.0000 | |
| 268 | G | A | 0.0000 | |
| 269 | A | A | -0.4514 | |
| 270 | Q | A | -0.5802 | |
| 271 | L | A | 0.0000 | |
| 272 | N | A | -0.9145 | |
| 273 | A | A | -0.6408 | |
| 274 | M | A | 0.0000 | |
| 275 | K | A | -1.1078 | |
| 276 | G | A | -1.1439 | |
| 277 | D | A | -0.9515 | |
| 278 | L | A | 0.0000 | |
| 279 | Q | A | -1.1507 | |
| 280 | S | A | -1.0093 | |
| 281 | S | A | -0.4708 | |
| 282 | L | A | 0.0000 | |
| 283 | G | A | -1.2257 | |
| 284 | A | A | -1.5184 | |
| 285 | G | A | -2.3098 | |
| 286 | K | A | -3.0871 | |
| 287 | E | A | -3.2197 | |
| 288 | S | A | -1.9057 | |
| 289 | G | A | -1.1783 | |
| 290 | S | A | -0.6560 | |
| 291 | V | A | 0.7928 | |
| 292 | S | A | -0.1055 | |
| 293 | S | A | -0.5221 | |
| 294 | E | A | -1.4199 | |
| 295 | Q | A | -0.3925 | |
| 296 | L | A | 0.8323 | |
| 297 | A | A | -0.4437 | |
| 298 | Q | A | -0.6361 | |
| 299 | F | A | 0.7443 | |
| 300 | R | A | -0.7848 | |
| 301 | S | A | -0.0391 | |
| 302 | L | A | 0.8530 | |
| 303 | D | A | -0.0344 | |
| 304 | F | A | 1.7390 | |
| 305 | A | A | 1.5025 | |
| 306 | V | A | 1.5217 | |
| 307 | T | A | -0.1375 | |
| 308 | N | A | -1.6003 | |
| 309 | D | A | -2.0940 | |
| 310 | G | A | -0.3133 | |
| 311 | V | A | 2.0025 | |
| 312 | I | A | 2.7677 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine