| Chain sequence(s) |
H: QVQLQESGPGLVKPSETLSLTCTVSGGSVSSGDYYWTWIRQSPGKGLEWIGHIYYSGNTNYNPSLKSRLTISIDTSKTQFSLKLSSVTAADTAIYYCVRDRVTGAFDIWGQGTMVTVSS
L: DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYFCQHFDHLPLAFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:16)
[INFO] Main: Simulation completed successfully. (00:01:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.7571 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -2.0990 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.8951 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.8798 | |
| 8 | G | H | -0.5374 | |
| 9 | P | H | -0.1810 | |
| 11 | G | H | 0.1831 | |
| 12 | L | H | 0.5522 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.4874 | |
| 15 | P | H | -1.1384 | |
| 16 | S | H | -1.1647 | |
| 17 | E | H | -1.5519 | |
| 18 | T | H | -1.2331 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.9671 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.6821 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -1.1614 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -1.5319 | |
| 27 | G | H | -1.4810 | |
| 28 | G | H | -1.1982 | |
| 29 | S | H | -0.8924 | |
| 30 | V | H | 0.0000 | |
| 31 | S | H | -0.3894 | |
| 34 | S | H | -0.6146 | |
| 35 | G | H | -0.7286 | |
| 36 | D | H | -1.3746 | |
| 37 | Y | H | -0.2263 | |
| 38 | Y | H | 0.1922 | |
| 39 | W | H | 0.0000 | |
| 40 | T | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.3320 | |
| 45 | S | H | -0.5876 | |
| 46 | P | H | -0.9067 | |
| 47 | G | H | -1.1675 | |
| 48 | K | H | -1.5837 | |
| 49 | G | H | -1.1736 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6103 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | H | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.0413 | |
| 58 | Y | H | 0.0832 | |
| 59 | S | H | -0.3725 | |
| 63 | G | H | -0.8422 | |
| 64 | N | H | -1.3095 | |
| 65 | T | H | -0.5947 | |
| 66 | N | H | -0.3225 | |
| 67 | Y | H | -0.2815 | |
| 68 | N | H | -0.6275 | |
| 69 | P | H | -0.8899 | |
| 70 | S | H | -0.8290 | |
| 71 | L | H | 0.0000 | |
| 72 | K | H | -1.9803 | |
| 74 | S | H | -1.2761 | |
| 75 | R | H | -1.3189 | |
| 76 | L | H | 0.0000 | |
| 77 | T | H | -0.9897 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5550 | |
| 80 | I | H | -0.4971 | |
| 81 | D | H | -1.2003 | |
| 82 | T | H | -0.9558 | |
| 83 | S | H | -1.3065 | |
| 84 | K | H | -2.1072 | |
| 85 | T | H | -1.3230 | |
| 86 | Q | H | -1.2635 | |
| 87 | F | H | 0.0000 | |
| 88 | S | H | -0.6173 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.5597 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.0294 | |
| 93 | S | H | -0.9177 | |
| 94 | V | H | 0.0000 | |
| 95 | T | H | -0.4960 | |
| 96 | A | H | -0.1926 | |
| 97 | A | H | -0.1594 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.2339 | |
| 100 | A | H | 0.0000 | |
| 101 | I | H | 0.7154 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | V | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | R | H | -0.1514 | |
| 109 | V | H | 0.5324 | |
| 110 | T | H | 0.2233 | |
| 113 | G | H | 0.0000 | |
| 114 | A | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.3490 | |
| 117 | I | H | 0.0000 | |
| 118 | W | H | -0.7686 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -2.0118 | |
| 121 | G | H | -0.8275 | |
| 122 | T | H | -0.1322 | |
| 123 | M | H | 0.8966 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2706 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.4550 | |
| 128 | S | H | -0.5992 | |
| 1 | D | L | -2.1861 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.0166 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.1024 | |
| 6 | Q | L | -0.8251 | |
| 7 | S | L | -0.6780 | |
| 8 | P | L | -0.5692 | |
| 9 | S | L | -0.7469 | |
| 10 | S | L | -0.9687 | |
| 11 | L | L | -0.7940 | |
| 12 | S | L | -0.9599 | |
| 13 | A | L | -1.0996 | |
| 14 | S | L | -0.8031 | |
| 15 | V | L | 0.0586 | |
| 16 | G | L | -0.5685 | |
| 17 | D | L | -1.6869 | |
| 18 | R | L | -2.3218 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6302 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.6346 | |
| 23 | C | L | 0.0000 | |
| 24 | Q | L | -2.0295 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.8671 | |
| 27 | Q | L | -2.3113 | |
| 28 | D | L | -2.5316 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -1.0939 | |
| 37 | N | L | -0.9217 | |
| 38 | Y | L | -0.0138 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.8372 | |
| 44 | Q | L | -1.2831 | |
| 45 | K | L | -1.6733 | |
| 46 | P | L | -1.1821 | |
| 47 | G | L | -1.6934 | |
| 48 | K | L | -2.5941 | |
| 49 | A | L | -1.5746 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.2509 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.1441 | |
| 56 | D | L | -0.5884 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.7160 | |
| 66 | N | L | -0.7327 | |
| 67 | L | L | 0.1129 | |
| 68 | E | L | 0.0000 | |
| 69 | T | L | -0.2090 | |
| 70 | G | L | -0.3676 | |
| 71 | V | L | -0.1685 | |
| 72 | P | L | -0.2747 | |
| 74 | S | L | -0.3765 | |
| 75 | R | L | -0.8367 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4110 | |
| 78 | G | L | -0.4171 | |
| 79 | S | L | -0.8243 | |
| 80 | G | L | -1.0674 | |
| 83 | S | L | -1.2678 | |
| 84 | G | L | -1.5578 | |
| 85 | T | L | -1.9502 | |
| 86 | D | L | -2.0131 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6058 | |
| 89 | F | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4059 | |
| 93 | S | L | -1.1707 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7731 | |
| 96 | P | L | -0.8965 | |
| 97 | E | L | -1.5092 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -0.4930 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8434 | |
| 102 | Y | L | 0.0000 | |
| 103 | F | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | H | L | 0.0000 | |
| 107 | F | L | 0.3011 | |
| 108 | D | L | -0.7502 | |
| 109 | H | L | -0.7099 | |
| 114 | L | L | 0.3798 | |
| 115 | P | L | -0.0691 | |
| 116 | L | L | 0.0000 | |
| 117 | A | L | -0.5929 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.0240 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.4703 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.6431 | |
| 126 | I | L | -0.8824 | |
| 127 | K | L | -1.6237 |