| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVSYYVITYGETGGHYWHWQTFTVPGSKSTATISGLKPGVDYTITVYAKSYMYGPPSYKSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37)
[INFO] Main: Simulation completed successfully. (00:00:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7694 | |
| 2 | S | A | 0.7435 | |
| 3 | S | A | 0.3851 | |
| 4 | V | A | 0.0134 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.3403 | |
| 7 | K | A | -2.3452 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.8180 | |
| 10 | V | A | 0.0920 | |
| 11 | V | A | 1.5226 | |
| 12 | A | A | 0.8824 | |
| 13 | A | A | 0.2929 | |
| 14 | T | A | -0.5286 | |
| 15 | P | A | -1.1222 | |
| 16 | T | A | -0.9941 | |
| 17 | S | A | -0.5323 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7211 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.7810 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -1.7463 | |
| 24 | A | A | -0.8176 | |
| 25 | P | A | 0.1978 | |
| 26 | A | A | 0.5083 | |
| 27 | V | A | 0.6568 | |
| 28 | T | A | 0.3932 | |
| 29 | V | A | 0.3534 | |
| 30 | S | A | 0.4143 | |
| 31 | Y | A | 0.4443 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | 0.1797 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.0284 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.4524 | |
| 39 | T | A | -1.0188 | |
| 40 | G | A | -0.7924 | |
| 41 | G | A | -0.7292 | |
| 42 | H | A | -0.4611 | |
| 43 | Y | A | 0.8567 | |
| 44 | W | A | 0.8957 | |
| 45 | H | A | -0.5215 | |
| 46 | W | A | -0.2551 | |
| 47 | Q | A | -0.7558 | |
| 48 | T | A | -0.3553 | |
| 49 | F | A | 0.2533 | |
| 50 | T | A | 0.3513 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -0.4953 | |
| 53 | G | A | -0.4949 | |
| 54 | S | A | -0.9894 | |
| 55 | K | A | -1.8784 | |
| 56 | S | A | -1.1376 | |
| 57 | T | A | -0.6582 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2295 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6579 | |
| 62 | G | A | -1.0288 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3383 | |
| 65 | P | A | -1.6466 | |
| 66 | G | A | -1.4343 | |
| 67 | V | A | -1.3396 | |
| 68 | D | A | -1.9871 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -0.8982 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | -0.1507 | |
| 75 | A | A | 0.0000 | |
| 76 | K | A | 0.0238 | |
| 77 | S | A | 0.0000 | |
| 78 | Y | A | 1.7662 | |
| 79 | M | A | 1.7273 | |
| 80 | Y | A | 1.7671 | |
| 81 | G | A | 0.6952 | |
| 82 | P | A | 0.2302 | |
| 83 | P | A | 0.0237 | |
| 84 | S | A | 0.4196 | |
| 85 | Y | A | 0.7112 | |
| 86 | K | A | -1.0734 | |
| 87 | S | A | -0.5581 | |
| 88 | S | A | -0.4135 | |
| 89 | P | A | -0.2902 | |
| 90 | I | A | 0.0245 | |
| 91 | S | A | -0.3960 | |
| 92 | I | A | -0.7338 | |
| 93 | N | A | -1.7130 | |
| 94 | Y | A | -1.4261 | |
| 95 | R | A | -2.4911 | |
| 96 | T | A | -1.5021 |