| Chain sequence(s) |
A: GPAPLAPEPPLRSTDDFVTPTDLLFYAETDLLTETGDPTKDVVVDGKVAVPKVSAYQWRVFKLTLPDPNTLPLPSADFVDPSTERLIWRLLAYEIKRFGPLGTGSYGHPNFNRLGDVDNPTEYQKGTADDTVNFSWTPKLKQEYIIGDRPPLGKYTAKAEPKPGLPPGAIPPTKTVTTYIQDGDMADIGFGAKDYKTLEPEKNNVPDIILDTTTKVVDYEGMRAEPTGRRLFDSGRYEKSYNSKNYVRDGPDKIPLPNESPPSPLYVKPPPSSPYAVLPPTNKFTIPDRGEITEDDLLFNKPFFLEKTRGLNNGILWHNQLYITVLDNTRDTIETIKTRTSTPANDVYDPSNYTESKRHTIEYKISLIVQLCRIPLTPETLAELDRIDPSILVDWKLPDVPPVERPDPYAGLKFIEIDLKDKLSTELEKHPLGRKYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6149 | |
| 2 | P | A | -0.2709 | |
| 3 | A | A | 0.1164 | |
| 4 | P | A | 0.3644 | |
| 5 | L | A | 1.0614 | |
| 6 | A | A | 0.1016 | |
| 7 | P | A | -0.8438 | |
| 8 | E | A | -1.8264 | |
| 9 | P | A | -1.3526 | |
| 10 | P | A | -0.9705 | |
| 11 | L | A | -0.6651 | |
| 12 | R | A | -1.3737 | |
| 13 | S | A | -1.3440 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.7592 | |
| 16 | D | A | -2.7388 | |
| 17 | F | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.9221 | |
| 20 | P | A | -0.9222 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.6079 | |
| 23 | L | A | -0.4241 | |
| 24 | L | A | -0.1209 | |
| 25 | F | A | -0.0406 | |
| 26 | Y | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.8880 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.3568 | |
| 31 | L | A | 0.3170 | |
| 32 | L | A | 0.1164 | |
| 33 | T | A | -0.2308 | |
| 34 | E | A | -0.5946 | |
| 35 | T | A | -0.5291 | |
| 36 | G | A | 0.0000 | |
| 37 | D | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.3823 | |
| 40 | K | A | -1.9654 | |
| 41 | D | A | -1.0281 | |
| 42 | V | A | 0.8882 | |
| 43 | V | A | 1.8891 | |
| 44 | V | A | 1.4769 | |
| 45 | D | A | -1.0125 | |
| 46 | G | A | -0.6748 | |
| 47 | K | A | -0.5577 | |
| 48 | V | A | 1.2704 | |
| 49 | A | A | 1.1133 | |
| 50 | V | A | 0.5449 | |
| 51 | P | A | -0.4879 | |
| 52 | K | A | -1.2578 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.5860 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4674 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.9513 | |
| 70 | T | A | -0.4886 | |
| 71 | L | A | -0.1422 | |
| 72 | P | A | -0.0377 | |
| 73 | L | A | 0.0862 | |
| 74 | P | A | -0.2468 | |
| 75 | S | A | -0.6180 | |
| 76 | A | A | -0.9579 | |
| 77 | D | A | -1.9774 | |
| 78 | F | A | -0.9425 | |
| 79 | V | A | 0.0000 | |
| 80 | D | A | -2.0594 | |
| 81 | P | A | -1.4371 | |
| 82 | S | A | -0.9170 | |
| 83 | T | A | -0.9015 | |
| 84 | E | A | -1.2491 | |
| 85 | R | A | -0.9812 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3374 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | Y | A | 0.0000 | |
| 94 | E | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | K | A | -0.5804 | |
| 97 | R | A | 0.0000 | |
| 98 | F | A | 0.4601 | |
| 99 | G | A | -0.0671 | |
| 100 | P | A | -0.0136 | |
| 101 | L | A | 0.1640 | |
| 102 | G | A | 0.1429 | |
| 103 | T | A | -0.1957 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.1944 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.8317 | |
| 108 | H | A | -1.4340 | |
| 109 | P | A | -1.5163 | |
| 110 | N | A | -2.3361 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | R | A | -1.2837 | |
| 114 | L | A | -1.0187 | |
| 115 | G | A | -1.3994 | |
| 116 | D | A | -2.0449 | |
| 117 | V | A | -1.8701 | |
| 118 | D | A | -2.7491 | |
| 119 | N | A | -2.7051 | |
| 120 | P | A | -1.9288 | |
| 121 | T | A | -1.5716 | |
| 122 | E | A | -2.1522 | |
| 123 | Y | A | -0.6111 | |
| 124 | Q | A | -0.8850 | |
| 125 | K | A | -1.1311 | |
| 126 | G | A | -1.4472 | |
| 127 | T | A | -1.1683 | |
| 128 | A | A | -1.0103 | |
| 129 | D | A | -2.1598 | |
| 130 | D | A | -1.4765 | |
| 131 | T | A | -1.4306 | |
| 132 | V | A | -1.0761 | |
| 133 | N | A | -1.6104 | |
| 134 | F | A | -0.7793 | |
| 135 | S | A | -0.4896 | |
| 136 | W | A | 0.0000 | |
| 137 | T | A | -0.2834 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | R | A | -0.3210 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.0921 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.5233 | |
| 155 | Y | A | -0.5390 | |
| 156 | T | A | -1.0016 | |
| 157 | A | A | -1.6830 | |
| 158 | K | A | -2.3800 | |
| 159 | A | A | -2.3019 | |
| 160 | E | A | -2.8767 | |
| 161 | P | A | -1.8797 | |
| 162 | K | A | -2.2615 | |
| 163 | P | A | -1.3448 | |
| 164 | G | A | -0.6601 | |
| 165 | L | A | 0.2851 | |
| 166 | P | A | 0.0856 | |
| 167 | P | A | -0.1609 | |
| 168 | G | A | -0.2454 | |
| 169 | A | A | 0.7949 | |
| 170 | I | A | 2.1136 | |
| 171 | P | A | 0.1223 | |
| 172 | P | A | -0.9040 | |
| 173 | T | A | -1.4192 | |
| 174 | K | A | -2.1217 | |
| 175 | T | A | -1.0493 | |
| 176 | V | A | -0.5990 | |
| 177 | T | A | -0.2596 | |
| 178 | T | A | 0.0370 | |
| 179 | Y | A | 0.0067 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.7521 | |
| 182 | D | A | -0.8288 | |
| 183 | G | A | -0.7229 | |
| 184 | D | A | -0.6911 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.1714 | |
| 190 | F | A | 0.0601 | |
| 191 | G | A | -0.1797 | |
| 192 | A | A | -0.2704 | |
| 193 | K | A | -0.9903 | |
| 194 | D | A | -1.4394 | |
| 195 | Y | A | 0.0000 | |
| 196 | K | A | -3.2799 | |
| 197 | T | A | -1.6773 | |
| 198 | L | A | -1.3477 | |
| 199 | E | A | -2.2038 | |
| 200 | P | A | -2.4399 | |
| 201 | E | A | -3.0750 | |
| 202 | K | A | -3.6522 | |
| 203 | N | A | -2.2881 | |
| 204 | N | A | -1.5392 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.7233 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -2.2560 | |
| 211 | D | A | -2.9541 | |
| 212 | T | A | -1.5356 | |
| 213 | T | A | -1.0031 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.0900 | |
| 217 | V | A | 0.0000 | |
| 218 | D | A | -0.9883 | |
| 219 | Y | A | -1.4446 | |
| 220 | E | A | -2.5254 | |
| 221 | G | A | -1.7716 | |
| 222 | M | A | 0.0000 | |
| 223 | R | A | -2.9568 | |
| 224 | A | A | -1.6145 | |
| 225 | E | A | -1.2382 | |
| 226 | P | A | -0.6688 | |
| 227 | T | A | 0.0000 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | 0.0000 | |
| 231 | L | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.7824 | |
| 234 | S | A | -0.7886 | |
| 235 | G | A | -0.9046 | |
| 236 | R | A | -1.7462 | |
| 237 | Y | A | -0.8343 | |
| 238 | E | A | -1.1423 | |
| 239 | K | A | -0.9106 | |
| 240 | S | A | -0.8849 | |
| 241 | Y | A | -0.6845 | |
| 242 | N | A | -1.4744 | |
| 243 | S | A | -1.2706 | |
| 244 | K | A | -2.1620 | |
| 245 | N | A | -2.1592 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | D | A | -1.8077 | |
| 250 | G | A | -1.4706 | |
| 251 | P | A | -1.3296 | |
| 252 | D | A | -1.4402 | |
| 253 | K | A | -1.3058 | |
| 254 | I | A | 0.9922 | |
| 255 | P | A | -0.4841 | |
| 256 | L | A | -0.1620 | |
| 257 | P | A | -0.6376 | |
| 258 | N | A | -2.1761 | |
| 259 | E | A | -2.5131 | |
| 260 | S | A | -1.8076 | |
| 261 | P | A | -1.2251 | |
| 262 | P | A | -0.7480 | |
| 263 | S | A | -0.6834 | |
| 264 | P | A | 0.1354 | |
| 265 | L | A | 1.2463 | |
| 266 | Y | A | 0.9424 | |
| 267 | V | A | 0.9760 | |
| 268 | K | A | -0.5563 | |
| 269 | P | A | -0.0650 | |
| 270 | P | A | -0.3706 | |
| 271 | P | A | -0.3747 | |
| 272 | S | A | -0.3364 | |
| 273 | S | A | 0.0359 | |
| 274 | P | A | 0.4291 | |
| 275 | Y | A | 1.1780 | |
| 276 | A | A | 0.7622 | |
| 277 | V | A | 1.8272 | |
| 278 | L | A | 1.2123 | |
| 279 | P | A | 0.0114 | |
| 280 | P | A | -1.2806 | |
| 281 | T | A | -1.0901 | |
| 282 | N | A | -2.3943 | |
| 283 | K | A | -2.3554 | |
| 284 | F | A | -1.2714 | |
| 285 | T | A | -0.9360 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.0575 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -1.2433 | |
| 291 | E | A | -1.8793 | |
| 292 | I | A | -1.3829 | |
| 293 | T | A | -1.8277 | |
| 294 | E | A | -2.6125 | |
| 295 | D | A | -2.7510 | |
| 296 | D | A | -1.8642 | |
| 297 | L | A | -1.1100 | |
| 298 | L | A | -0.9215 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.2204 | |
| 301 | K | A | -1.5951 | |
| 302 | P | A | -0.7816 | |
| 303 | F | A | 0.0260 | |
| 304 | F | A | -0.2997 | |
| 305 | L | A | -0.9486 | |
| 306 | E | A | -2.3991 | |
| 307 | K | A | -3.0705 | |
| 308 | T | A | 0.0000 | |
| 309 | R | A | -2.5747 | |
| 310 | G | A | -1.5058 | |
| 311 | L | A | -0.8445 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.6382 | |
| 319 | N | A | -0.7757 | |
| 320 | Q | A | -0.6364 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | D | A | 0.0000 | |
| 332 | T | A | -0.3896 | |
| 333 | I | A | -0.7198 | |
| 334 | E | A | -1.7269 | |
| 335 | T | A | -1.3716 | |
| 336 | I | A | -0.7275 | |
| 337 | K | A | -2.3901 | |
| 338 | T | A | -1.8580 | |
| 339 | R | A | -2.5690 | |
| 340 | T | A | -1.2661 | |
| 341 | S | A | -0.8226 | |
| 342 | T | A | -0.9312 | |
| 343 | P | A | -0.8137 | |
| 344 | A | A | -0.7121 | |
| 345 | N | A | -1.4441 | |
| 346 | D | A | -1.3262 | |
| 347 | V | A | 0.9147 | |
| 348 | Y | A | 1.0700 | |
| 349 | D | A | -0.2670 | |
| 350 | P | A | -0.9890 | |
| 351 | S | A | -0.6869 | |
| 352 | N | A | -1.0801 | |
| 353 | Y | A | -1.5038 | |
| 354 | T | A | -1.7002 | |
| 355 | E | A | -2.5358 | |
| 356 | S | A | -1.7127 | |
| 357 | K | A | -1.8807 | |
| 358 | R | A | -1.1446 | |
| 359 | H | A | 0.0000 | |
| 360 | T | A | -0.5511 | |
| 361 | I | A | 0.0000 | |
| 362 | E | A | -0.1259 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.4742 | |
| 365 | I | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.3472 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -0.7549 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.7187 | |
| 376 | L | A | -0.3909 | |
| 377 | T | A | -0.6482 | |
| 378 | P | A | -0.9825 | |
| 379 | E | A | -1.9211 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.6760 | |
| 382 | A | A | -1.1092 | |
| 383 | E | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | D | A | -1.8291 | |
| 386 | R | A | -1.5327 | |
| 387 | I | A | -0.8874 | |
| 388 | D | A | -0.9060 | |
| 389 | P | A | -1.0397 | |
| 390 | S | A | -0.7048 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -0.6697 | |
| 393 | V | A | -0.8164 | |
| 394 | D | A | -1.3350 | |
| 395 | W | A | -1.1119 | |
| 396 | K | A | -1.7931 | |
| 397 | L | A | -1.2931 | |
| 398 | P | A | -1.4102 | |
| 399 | D | A | -1.9640 | |
| 400 | V | A | -0.7541 | |
| 401 | P | A | -0.5509 | |
| 402 | P | A | -0.5275 | |
| 403 | V | A | 0.3456 | |
| 404 | E | A | -1.5240 | |
| 405 | R | A | -1.4465 | |
| 406 | P | A | -1.3224 | |
| 407 | D | A | -1.6602 | |
| 408 | P | A | -0.9216 | |
| 409 | Y | A | 0.0000 | |
| 410 | A | A | -0.8026 | |
| 411 | G | A | -0.8232 | |
| 412 | L | A | -0.8195 | |
| 413 | K | A | -1.8753 | |
| 414 | F | A | -1.1149 | |
| 415 | I | A | -1.0787 | |
| 416 | E | A | -2.2601 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -3.1696 | |
| 419 | L | A | 0.0000 | |
| 420 | K | A | -3.4407 | |
| 421 | D | A | -3.3560 | |
| 422 | K | A | -2.8822 | |
| 423 | L | A | -1.2464 | |
| 424 | S | A | -0.8806 | |
| 425 | T | A | -0.6757 | |
| 426 | E | A | -1.9894 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.4323 | |
| 429 | K | A | -3.2251 | |
| 430 | H | A | -2.3585 | |
| 431 | P | A | -1.6525 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.9382 | |
| 435 | K | A | -2.2028 | |
| 436 | Y | A | -1.0731 | |
| 437 | L | A | -0.6753 | |
| 438 | N | A | -2.2445 | |
| 439 | R | A | -2.2680 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine