Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCKTSGFTFSSTYISWVRQAPGQSLEWMGWIYAGTGGTRYNQKFQGRVTITVDTSASTAYMELSSLRSEDTAVYYCARRDPIPYFDVWGQGTTVTVSS
L: EIVMTQSPATLSLSPGERATLSCRASENVGAYVSWYQQKPGQAPRLLIYGASNRYTGVPDRFSGSGSGTDFTLTISSLQPEDLADYHCGQSYSFPFTFGQGTKLEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:07) [INFO] Main: Simulation completed successfully. (00:02:09) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.2240 | |
2 | V | H | -0.4445 | |
3 | Q | H | -0.8082 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.7154 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.5355 | |
8 | G | H | -0.5422 | |
9 | A | H | -0.0436 | |
11 | E | H | -0.0944 | |
12 | V | H | 0.9192 | |
13 | K | H | -0.8862 | |
14 | K | H | -2.1344 | |
15 | P | H | -2.1641 | |
16 | G | H | -1.4918 | |
17 | A | H | -1.2021 | |
18 | S | H | -1.3361 | |
19 | V | H | 0.0000 | |
20 | K | H | -2.0286 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.5398 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.9493 | |
25 | T | H | 0.0000 | |
26 | S | H | -0.6259 | |
27 | G | H | -0.7198 | |
28 | F | H | -0.1050 | |
29 | T | H | -0.0705 | |
30 | F | H | 0.0000 | |
35 | S | H | -0.3327 | |
36 | S | H | -0.2581 | |
37 | T | H | 0.0000 | |
38 | Y | H | 0.1538 | |
39 | I | H | 0.0000 | |
40 | S | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.5493 | |
45 | A | H | -0.9713 | |
46 | P | H | -0.9933 | |
47 | G | H | -1.1930 | |
48 | Q | H | -1.7972 | |
49 | S | H | -1.2673 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.8361 | |
52 | W | H | 0.0000 | |
53 | M | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | W | H | -0.0732 | |
56 | I | H | 0.0000 | |
57 | Y | H | 0.0255 | |
58 | A | H | 0.0000 | |
59 | G | H | -0.4917 | |
62 | T | H | -0.3283 | |
63 | G | H | -0.3963 | |
64 | G | H | -0.4714 | |
65 | T | H | -0.4798 | |
66 | R | H | -0.9529 | |
67 | Y | H | -1.0897 | |
68 | N | H | -1.4876 | |
69 | Q | H | -2.4743 | |
70 | K | H | -2.7497 | |
71 | F | H | 0.0000 | |
72 | Q | H | -2.5089 | |
74 | G | H | -1.5883 | |
75 | R | H | -1.2316 | |
76 | V | H | 0.0000 | |
77 | T | H | -0.8238 | |
78 | I | H | 0.0000 | |
79 | T | H | -0.1164 | |
80 | V | H | -0.3093 | |
81 | D | H | -0.8466 | |
82 | T | H | -0.5651 | |
83 | S | H | -0.4363 | |
84 | A | H | -0.5877 | |
85 | S | H | -0.6511 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.5962 | |
89 | M | H | 0.0000 | |
90 | E | H | -1.3763 | |
91 | L | H | 0.0000 | |
92 | S | H | -1.0735 | |
93 | S | H | -1.1482 | |
94 | L | H | 0.0000 | |
95 | R | H | -2.7195 | |
96 | S | H | -2.1917 | |
97 | E | H | -2.4529 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.7978 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.2331 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | -0.1591 | |
107 | R | H | 0.0000 | |
108 | D | H | 0.0987 | |
109 | P | H | 0.3387 | |
110 | I | H | 1.4735 | |
113 | P | H | 0.9531 | |
114 | Y | H | 0.5553 | |
115 | F | H | 0.0000 | |
116 | D | H | -0.0874 | |
117 | V | H | -0.1263 | |
118 | W | H | 0.0000 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.1765 | |
121 | G | H | -0.5655 | |
122 | T | H | 0.0000 | |
123 | T | H | 0.0399 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.2662 | |
126 | V | H | 0.0000 | |
127 | S | H | -1.1199 | |
128 | S | H | -0.9504 | |
1 | E | L | -1.4471 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.5169 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.6973 | |
6 | Q | L | 0.0000 | |
7 | S | L | -0.7635 | |
8 | P | L | -0.3474 | |
9 | A | L | -0.5191 | |
10 | T | L | -0.6326 | |
11 | L | L | -0.4855 | |
12 | S | L | -0.7082 | |
13 | L | L | -1.0892 | |
14 | S | L | -1.4660 | |
15 | P | L | -1.6177 | |
16 | G | L | -1.4249 | |
17 | E | L | -2.0894 | |
18 | R | L | -2.4506 | |
19 | A | L | 0.0000 | |
20 | T | L | -0.6508 | |
21 | L | L | 0.0000 | |
22 | S | L | -0.8939 | |
23 | C | L | 0.0000 | |
24 | R | L | -2.5651 | |
25 | A | L | 0.0000 | |
26 | S | L | -1.5572 | |
27 | E | L | -2.5600 | |
28 | N | L | -2.3356 | |
29 | V | L | 0.0000 | |
36 | G | L | -0.5058 | |
37 | A | L | -0.0656 | |
38 | Y | L | 1.1094 | |
39 | V | L | 0.0000 | |
40 | S | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.4881 | |
46 | P | L | -1.0300 | |
47 | G | L | -1.4458 | |
48 | Q | L | -2.0436 | |
49 | A | L | -1.2650 | |
50 | P | L | 0.0000 | |
51 | R | L | -0.9513 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.2417 | |
56 | G | L | 0.0618 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.7741 | |
66 | N | L | -1.1620 | |
67 | R | L | -1.4432 | |
68 | Y | L | -0.4804 | |
69 | T | L | -0.4601 | |
70 | G | L | -0.8090 | |
71 | V | L | 0.0000 | |
72 | P | L | -1.3131 | |
74 | D | L | -2.2261 | |
75 | R | L | -1.6323 | |
76 | F | L | 0.0000 | |
77 | S | L | -1.0311 | |
78 | G | L | -0.6287 | |
79 | S | L | -0.7926 | |
80 | G | L | -1.1117 | |
83 | S | L | -1.0798 | |
84 | G | L | -1.5174 | |
85 | T | L | -2.2483 | |
86 | D | L | -2.2713 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.7976 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.6142 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.5023 | |
93 | S | L | -1.6497 | |
94 | L | L | 0.0000 | |
95 | Q | L | -1.5238 | |
96 | P | L | -1.3758 | |
97 | E | L | -1.7219 | |
98 | D | L | 0.0000 | |
99 | L | L | -0.3271 | |
100 | A | L | 0.0000 | |
101 | D | L | -1.0039 | |
102 | Y | L | 0.0000 | |
103 | H | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | G | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | S | L | 0.0000 | |
108 | Y | L | 1.3296 | |
109 | S | L | 0.6968 | |
114 | F | L | 0.9913 | |
115 | P | L | -0.0446 | |
116 | F | L | 0.0000 | |
117 | T | L | 0.2213 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | Q | L | -1.2613 | |
121 | G | L | -1.0905 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.3587 | |
124 | L | L | 0.0000 | |
125 | E | L | -1.1110 | |
126 | I | L | -0.9681 | |
127 | K | L | -1.7637 |