Project name: query_structure

Status: done

Started: 2026-03-16 23:20:42
Settings
Chain sequence(s) A: GFPTCGETCTLGTCNTPGCTCSWPICTRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:14)
Show buried residues

Minimal score value
-1.9993
Maximal score value
1.5014
Average score
-0.1413
Total score value
-4.0972

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.4136
2 F A 1.3527
3 P A -0.1738
4 T A -0.1135
5 C A -0.5936
6 G A -0.4271
7 E A -0.6637
8 T A 0.1792
9 C A 0.0000
10 T A 0.8886
11 L A 1.5014
12 G A 0.5848
13 T A 0.1096
14 C A -0.4602
15 N A -1.3858
16 T A -1.0929
17 P A -0.9243
18 G A -1.3037
19 C A -1.2745
20 T A -0.5316
21 C A 0.3578
22 S A 0.5991
23 W A 1.4453
24 P A 0.9742
25 I A 0.8107
26 C A 0.0000
27 T A -0.5652
28 R A -1.8050
29 N A -1.9993
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Laboratory of Theory of Biopolymers 2018