| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPTMVTQYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTWRWRYSKPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:35)
[INFO] Main: Simulation completed successfully. (00:01:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6333 | |
| 2 | S | A | 0.1001 | |
| 3 | D | A | -0.4749 | |
| 4 | V | A | -1.1052 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.5378 | |
| 7 | D | A | -3.5748 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1810 | |
| 10 | V | A | 0.0834 | |
| 11 | V | A | 1.5299 | |
| 12 | A | A | 0.8861 | |
| 13 | A | A | 0.2896 | |
| 14 | T | A | -0.5307 | |
| 15 | P | A | -1.1290 | |
| 16 | T | A | -1.0032 | |
| 17 | S | A | -0.5354 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7225 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1955 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.4126 | |
| 24 | A | A | -1.6021 | |
| 25 | P | A | -0.3661 | |
| 26 | T | A | 0.5232 | |
| 27 | M | A | 1.2342 | |
| 28 | V | A | 1.6774 | |
| 29 | T | A | 0.1336 | |
| 30 | Q | A | -0.4571 | |
| 31 | Y | A | -0.3693 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.3522 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.2910 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.7069 | |
| 39 | T | A | -1.4201 | |
| 40 | G | A | -1.3195 | |
| 41 | G | A | -1.4828 | |
| 42 | N | A | -1.5523 | |
| 43 | S | A | -0.8703 | |
| 44 | P | A | -0.3180 | |
| 45 | V | A | 0.4455 | |
| 46 | Q | A | -0.8271 | |
| 47 | E | A | -1.5906 | |
| 48 | F | A | -0.6179 | |
| 49 | T | A | -0.2781 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.0919 | |
| 52 | G | A | -0.9351 | |
| 53 | S | A | -1.1072 | |
| 54 | K | A | -2.0894 | |
| 55 | S | A | -1.4468 | |
| 56 | T | A | -0.7884 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2297 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6598 | |
| 61 | G | A | -1.0290 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.4347 | |
| 64 | P | A | -1.7307 | |
| 65 | G | A | -1.5549 | |
| 66 | V | A | -1.6360 | |
| 67 | D | A | -2.5594 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.8869 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.1268 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | -0.2652 | |
| 74 | A | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | T | A | 0.0000 | |
| 77 | W | A | 0.3870 | |
| 78 | R | A | -1.2183 | |
| 79 | W | A | -0.0845 | |
| 80 | R | A | -1.4055 | |
| 81 | Y | A | -0.2706 | |
| 82 | S | A | 0.0000 | |
| 83 | K | A | -1.6952 | |
| 84 | P | A | -0.8254 | |
| 85 | I | A | -0.6346 | |
| 86 | S | A | -0.6680 | |
| 87 | I | A | -0.7206 | |
| 88 | N | A | -1.8338 | |
| 89 | Y | A | -1.6197 | |
| 90 | R | A | -2.7329 | |
| 91 | T | A | -1.6209 |