Project name: query_structure

Status: done

Started: 2026-03-17 01:15:14
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPTMVTQYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTWRWRYSKPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:36)
Show buried residues

Minimal score value
-3.5748
Maximal score value
1.6774
Average score
-0.6582
Total score value
-59.8982

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6333
2 S A 0.1001
3 D A -0.4749
4 V A -1.1052
5 P A 0.0000
6 R A -3.5378
7 D A -3.5748
8 L A 0.0000
9 E A -2.1810
10 V A 0.0834
11 V A 1.5299
12 A A 0.8861
13 A A 0.2896
14 T A -0.5307
15 P A -1.1290
16 T A -1.0032
17 S A -0.5354
18 L A 0.0000
19 L A 0.7225
20 I A 0.0000
21 S A -1.1955
22 W A 0.0000
23 D A -3.4126
24 A A -1.6021
25 P A -0.3661
26 T A 0.5232
27 M A 1.2342
28 V A 1.6774
29 T A 0.1336
30 Q A -0.4571
31 Y A -0.3693
32 Y A 0.0000
33 R A -0.3522
34 I A 0.0000
35 T A 0.0000
36 Y A -0.2910
37 G A 0.0000
38 E A -1.7069
39 T A -1.4201
40 G A -1.3195
41 G A -1.4828
42 N A -1.5523
43 S A -0.8703
44 P A -0.3180
45 V A 0.4455
46 Q A -0.8271
47 E A -1.5906
48 F A -0.6179
49 T A -0.2781
50 V A 0.0000
51 P A -1.0919
52 G A -0.9351
53 S A -1.1072
54 K A -2.0894
55 S A -1.4468
56 T A -0.7884
57 A A 0.0000
58 T A 0.2297
59 I A 0.0000
60 S A -0.6598
61 G A -1.0290
62 L A 0.0000
63 K A -2.4347
64 P A -1.7307
65 G A -1.5549
66 V A -1.6360
67 D A -2.5594
68 Y A 0.0000
69 T A -0.8869
70 I A 0.0000
71 T A -0.1268
72 V A 0.0000
73 Y A -0.2652
74 A A 0.0000
75 V A 0.0000
76 T A 0.0000
77 W A 0.3870
78 R A -1.2183
79 W A -0.0845
80 R A -1.4055
81 Y A -0.2706
82 S A 0.0000
83 K A -1.6952
84 P A -0.8254
85 I A -0.6346
86 S A -0.6680
87 I A -0.7206
88 N A -1.8338
89 Y A -1.6197
90 R A -2.7329
91 T A -1.6209
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Laboratory of Theory of Biopolymers 2018