Project name: Asparaginase-1WLS

Status: done

Started: 2024-07-04 19:21:56
Settings
Chain sequence(s) A: MRILILGMGGTIASVKGERGYESALSVSKILKLAGISSEAKIEARDLMNVDSTLIQPSDWERLAKEIEKEVWEYDGIVITHGTDTMAYSASMLSFMLRNPPIPIVLTGSMLPITEKNSDAPFNLRTALEFVKLGIRGIYIAFNGKVMLGVRASKIRSMGFDAFESINYPNVAEIKDDKLRILHIPDFYGDEFFSDIKYEPKVLVIKLIPGLSGDIVREALRLGYKGIILEGYGVGGIPYRGTDLFEVVSSISKRIPVVLTTQAIYDGVDLQRYKVGRIALEAGVIPAGDMTKEATITKLMWILGHTKNIEEVKQLMGKNITGELTRVS
B: MRILILGMGGTIASVKGERGYESALSVSKILKLAGISSEAKIEARDLMNVDSTLIQPSDWERLAKEIEKEVWEYDGIVITHGTDTMAYSASMLSFMLRNPPIPIVLTGSMLPITEKNSDAPFNLRTALEFVKLGIRGIYIAFNGKVMLGVRASKIRSMGFDAFESINYPNVAEIKDDKLRILHIPDFYGDEFFSDIKYEPKVLVIKLIPGLSGDIVREALRLGYKGIILEGYGVGGIPYRGTDLFEVVSSISKRIPVVLTTQAIYDGVDLQRYKVGRIALEAGVIPAGDMTKEATITKLMWILGHTKNIEEVKQLMGKNITGELTRVS
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:09:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:09:50)
Show buried residues

Minimal score value
-4.0964
Maximal score value
1.6525
Average score
-0.6564
Total score value
-430.6156

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -1.0784
2 R A -1.7832
3 I A 0.0000
4 L A 0.0000
5 I A 0.0000
6 L A 0.0000
7 G A 0.0000
8 M A 0.0000
9 G A 0.0000
10 G A 0.0000
11 T A 0.0000
12 I A 0.0000
13 A A 0.0000
14 S A 0.0000
15 V A -0.2994
16 K A -2.4228
17 G A -2.4865
18 E A -3.3182
19 R A -3.9070
20 G A 0.0000
21 Y A 0.0000
22 E A -1.8775
23 S A -0.5988
24 A A -0.1960
25 L A -0.4196
26 S A -1.2645
27 V A 0.0000
28 S A -1.6707
29 K A -1.7754
30 I A 0.0000
31 L A 0.0000
32 K A -1.6478
33 L A -0.3800
34 A A -0.4471
35 G A -0.6325
36 I A -0.5354
37 S A -0.9605
38 S A -1.4295
39 E A -2.1131
40 A A -1.7810
41 K A -2.2700
42 I A -0.9747
43 E A -1.1708
44 A A -1.6220
45 R A -2.7741
46 D A -2.6515
47 L A -1.4566
48 M A -0.9625
49 N A -0.7718
50 V A -0.2049
51 D A -0.4496
52 S A 0.0000
53 T A 0.0000
54 L A -0.1066
55 I A 0.0000
56 Q A -0.5329
57 P A 0.0000
58 S A -1.1499
59 D A 0.0000
60 W A 0.0000
61 E A -2.1857
62 R A -2.6847
63 L A 0.0000
64 A A 0.0000
65 K A -2.6232
66 E A -2.2587
67 I A 0.0000
68 E A -1.6111
69 K A -2.4837
70 E A -1.8371
71 V A 0.0000
72 W A -0.1350
73 E A -1.4488
74 Y A -1.1506
75 D A -1.8172
76 G A 0.0000
77 I A 0.0000
78 V A 0.0000
79 I A 0.0000
80 T A 0.0000
81 H A 0.0000
82 G A 0.0000
83 T A 0.0000
84 D A -0.2885
85 T A 0.0000
86 M A 0.0000
87 A A 0.0000
88 Y A 0.0000
89 S A 0.0000
90 A A 0.0000
91 S A 0.0000
92 M A 0.0000
93 L A 0.0000
94 S A 0.0000
95 F A 0.0000
96 M A 0.0000
97 L A 0.0000
98 R A -0.4149
99 N A -0.8588
100 P A 0.0000
101 P A -0.6855
102 I A 0.0000
103 P A 0.0000
104 I A 0.0000
105 V A 0.0000
106 L A 0.0000
107 T A 0.0000
108 G A 0.0000
109 S A 0.0000
110 M A 0.0000
111 L A -0.2828
112 P A 0.0000
113 I A 0.0000
114 T A -1.1444
115 E A -2.4424
116 K A -3.0528
117 N A -2.4477
118 S A -1.4088
119 D A 0.0000
120 A A 0.0000
121 P A -0.1321
122 F A 0.3458
123 N A 0.0000
124 L A 0.0000
125 R A -1.3824
126 T A 0.0000
127 A A 0.0000
128 L A -0.9164
129 E A -1.8566
130 F A 0.0000
131 V A 0.0000
132 K A -1.7938
133 L A -0.5588
134 G A -1.0339
135 I A 0.0000
136 R A -0.5851
137 G A 0.0000
138 I A 0.0000
139 Y A 0.0000
140 I A 0.0000
141 A A 0.0000
142 F A 0.0000
143 N A -0.3835
144 G A 0.0000
145 K A -0.7441
146 V A 0.0000
147 M A 0.0000
148 L A 0.0000
149 G A 0.0000
150 V A 0.0000
151 R A 0.0000
152 A A 0.0000
153 S A 0.0000
154 K A -0.4344
155 I A 0.0000
156 R A -0.3643
157 S A 0.0000
158 M A 0.0963
159 G A -0.0077
160 F A 0.2853
161 D A -0.6432
162 A A 0.0000
163 F A 0.0000
164 E A -0.7183
165 S A -0.3851
166 I A 0.0000
167 N A -0.5885
168 Y A -0.2961
169 P A -0.3227
170 N A -0.1463
171 V A 0.0000
172 A A 0.0000
173 E A -1.5373
174 I A -2.0774
175 K A -3.1092
176 D A -3.6707
177 D A -3.8857
178 K A -3.8130
179 L A 0.0000
180 R A -2.5159
181 I A -0.0102
182 L A 0.5814
183 H A 0.6655
184 I A 1.6026
185 P A 0.0000
186 D A -0.9867
187 F A -0.2848
188 Y A -0.9933
189 G A -1.7074
190 D A -2.6089
191 E A -2.4755
192 F A -0.8734
193 F A 0.1356
194 S A -0.0728
195 D A -0.4391
196 I A -0.6157
197 K A -0.6991
198 Y A -0.5864
199 E A -0.9256
200 P A -0.6735
201 K A -0.8242
202 V A 0.0000
203 L A 0.0000
204 V A 0.0000
205 I A 0.0000
206 K A 0.0000
207 L A 0.0000
208 I A 0.0000
209 P A 0.0000
210 G A -0.7962
211 L A 0.0000
212 S A -0.9636
213 G A 0.0000
214 D A -1.0297
215 I A 0.0000
216 V A 0.0000
217 R A -2.1625
218 E A 0.0000
219 A A 0.0000
220 L A -1.5083
221 R A -2.0309
222 L A -0.8727
223 G A -0.7535
224 Y A 0.0000
225 K A -1.3954
226 G A 0.0000
227 I A 0.0000
228 I A 0.0000
229 L A 0.0000
230 E A 0.0000
231 G A 0.0000
232 Y A 0.0000
233 G A 0.0000
234 V A 0.0000
235 G A 0.0000
236 G A 0.0000
237 I A 0.0000
238 P A 0.0000
239 Y A -0.6345
240 R A -0.7901
241 G A -0.9892
242 T A -1.1920
243 D A -1.8013
244 L A 0.0000
245 F A -0.8338
246 E A -1.9499
247 V A -1.3698
248 V A 0.0000
249 S A -1.4418
250 S A -1.6999
251 I A 0.0000
252 S A 0.0000
253 K A -2.9716
254 R A -3.0454
255 I A 0.0000
256 P A 0.0000
257 V A 0.0000
258 V A 0.0000
259 L A 0.0000
260 T A 0.0000
261 T A 0.0000
262 Q A -0.2977
263 A A 0.0000
264 I A 0.0000
265 Y A -0.3565
266 D A -0.6823
267 G A 0.0000
268 V A 0.0000
269 D A -0.8560
270 L A 0.0000
271 Q A -1.7772
272 R A -1.6035
273 Y A 0.0000
274 K A -1.9415
275 V A 0.0000
276 G A 0.0000
277 R A -1.4580
278 I A -0.6999
279 A A 0.0000
280 L A -0.7672
281 E A -1.6043
282 A A -1.2424
283 G A -1.4518
284 V A 0.0000
285 I A 0.0000
286 P A -0.3730
287 A A 0.0000
288 G A -0.5073
289 D A -0.5278
290 M A 0.0000
291 T A 0.0000
292 K A -0.2915
293 E A 0.0000
294 A A 0.0000
295 T A 0.0000
296 I A 0.0000
297 T A 0.0000
298 K A 0.0000
299 L A 0.0000
300 M A 0.0000
301 W A 0.0000
302 I A 0.0000
303 L A 0.0000
304 G A -0.9771
305 H A -1.5226
306 T A -1.8067
307 K A -2.7950
308 N A -3.0429
309 I A -2.8399
310 E A -3.4257
311 E A -2.9628
312 V A 0.0000
313 K A -2.8298
314 Q A -2.9126
315 L A -1.8781
316 M A 0.0000
317 G A -1.9711
318 K A -2.3271
319 N A -1.7898
320 I A -0.5450
321 T A 0.0000
322 G A 0.0000
323 E A 0.0000
324 L A 0.0000
325 T A -0.9858
326 R A -1.5046
327 V A 0.3376
328 S A 0.1357
1 M B -0.9674
2 R B -2.1373
3 I B 0.0000
4 L B 0.0000
5 I B 0.0000
6 L B 0.0000
7 G B 0.0000
8 M B 0.0000
9 G B 0.0000
10 G B 0.0000
11 T B 0.0000
12 I B 0.0000
13 A B 0.0000
14 S B 0.0000
15 V B -0.8304
16 K B -2.5047
17 G B -2.4513
18 E B -2.9536
19 R B -3.0000
20 G B 0.0000
21 Y B 0.0000
22 E B -1.8183
23 S B -0.7746
24 A B -0.5088
25 L B 0.0000
26 S B -0.8912
27 V B 0.0000
28 S B -1.7201
29 K B -1.7537
30 I B 0.0000
31 L B 0.0000
32 K B -2.2750
33 L B -0.6983
34 A B 0.0000
35 G B -1.1010
36 I B -0.9076
37 S B -1.0194
38 S B -1.8473
39 E B -2.8716
40 A B -1.9437
41 K B -2.5817
42 I B -2.1964
43 E B -2.2678
44 A B -1.6649
45 R B -1.2662
46 D B -1.2830
47 L B -0.7429
48 M B -0.5423
49 N B -0.6303
50 V B -0.3032
51 D B -0.6131
52 S B 0.0000
53 T B 0.0000
54 L B 0.0000
55 I B 0.0000
56 Q B -0.6061
57 P B 0.0000
58 S B -1.0874
59 D B 0.0000
60 W B 0.0000
61 E B -2.2717
62 R B -2.4936
63 L B 0.0000
64 A B 0.0000
65 K B -3.0648
66 E B -2.2230
67 I B 0.0000
68 E B -1.6267
69 K B -2.5354
70 E B -1.7970
71 V B 0.0000
72 W B -0.3819
73 E B -1.9675
74 Y B 0.0000
75 D B -1.9658
76 G B 0.0000
77 I B 0.0000
78 V B 0.0000
79 I B 0.0000
80 T B 0.0000
81 H B 0.0000
82 G B 0.0000
83 T B 0.0000
84 D B 0.0000
85 T B 0.0000
86 M B 0.0000
87 A B 0.0000
88 Y B 0.0000
89 S B 0.0000
90 A B 0.0000
91 S B 0.0000
92 M B 0.0000
93 L B 0.0000
94 S B 0.0000
95 F B 0.0000
96 M B 0.0000
97 L B 0.0000
98 R B -0.5413
99 N B -0.8786
100 P B 0.0000
101 P B -0.7481
102 I B 0.0000
103 P B 0.0000
104 I B 0.0000
105 V B 0.0000
106 L B 0.0000
107 T B 0.0000
108 G B 0.0000
109 S B 0.0000
110 M B 0.0000
111 L B -0.2991
112 P B 0.0000
113 I B -0.3832
114 T B -0.8021
115 E B -1.7505
116 K B -2.5018
117 N B -2.1761
118 S B -0.9445
119 D B 0.0000
120 A B 0.0000
121 P B 0.1380
122 F B 0.6264
123 N B 0.0000
124 L B 0.0000
125 R B -0.8078
126 T B 0.0000
127 A B 0.0000
128 L B 0.0000
129 E B -1.5317
130 F B 0.0000
131 V B 0.0000
132 K B -2.0099
133 L B -0.9704
134 G B -1.2095
135 I B 0.0000
136 R B -0.6556
137 G B 0.0000
138 I B 0.0000
139 Y B 0.0000
140 I B 0.0000
141 A B 0.0000
142 F B 0.0000
143 N B -0.3835
144 G B 0.0000
145 K B -0.8692
146 V B 0.0000
147 M B 0.0000
148 L B 0.0000
149 G B 0.0000
150 V B 0.0000
151 R B 0.0000
152 A B 0.0000
153 S B -0.2040
154 K B 0.0000
155 I B 0.0000
156 R B -0.4886
157 S B 0.0000
158 M B 0.0956
159 G B -0.0051
160 F B 0.2927
161 D B -0.5044
162 A B 0.0000
163 F B 0.0000
164 E B -0.7445
165 S B -0.4037
166 I B 0.0000
167 N B -0.5813
168 Y B -0.2493
169 P B -0.3392
170 N B -0.1458
171 V B 0.0000
172 A B 0.0000
173 E B -1.7080
174 I B -2.3602
175 K B -3.7882
176 D B -4.0964
177 D B -4.0605
178 K B -3.9162
179 L B 0.0000
180 R B -2.2602
181 I B 0.2225
182 L B 0.6893
183 H B 0.7830
184 I B 1.6525
185 P B 0.0000
186 D B -0.9646
187 F B -0.0600
188 Y B -0.8908
189 G B -1.5763
190 D B -2.6773
191 E B -2.5155
192 F B -0.9887
193 F B -0.2164
194 S B -0.5948
195 D B -0.6938
196 I B -1.2911
197 K B -1.9168
198 Y B -1.0968
199 E B -1.0706
200 P B -0.8135
201 K B -0.8917
202 V B 0.0000
203 L B 0.0000
204 V B 0.0000
205 I B 0.0000
206 K B 0.0000
207 L B 0.0000
208 I B 0.0000
209 P B 0.0000
210 G B -0.6729
211 L B 0.0000
212 S B -1.0327
213 G B 0.0000
214 D B -1.1612
215 I B 0.0000
216 V B 0.0000
217 R B -2.4520
218 E B -1.7284
219 A B 0.0000
220 L B -1.8152
221 R B -2.3427
222 L B -1.2456
223 G B -1.0616
224 Y B 0.0000
225 K B -1.5268
226 G B 0.0000
227 I B 0.0000
228 I B 0.0000
229 L B 0.0000
230 E B 0.0000
231 G B 0.0000
232 Y B 0.0000
233 G B 0.0000
234 V B 0.0000
235 G B 0.0000
236 G B 0.0000
237 I B 0.0000
238 P B 0.0000
239 Y B -0.6237
240 R B -0.8477
241 G B -0.9981
242 T B -1.2572
243 D B -1.9595
244 L B 0.0000
245 F B 0.0000
246 E B -2.2014
247 V B 0.0000
248 V B 0.0000
249 S B -1.5107
250 S B -1.7341
251 I B 0.0000
252 S B 0.0000
253 K B -2.9806
254 R B -3.0806
255 I B 0.0000
256 P B 0.0000
257 V B 0.0000
258 V B 0.0000
259 L B 0.0000
260 T B 0.0000
261 T B 0.0000
262 Q B -0.2718
263 A B 0.0000
264 I B 0.0338
265 Y B -0.1739
266 D B -0.6071
267 G B 0.0000
268 V B 0.0000
269 D B -1.2837
270 L B 0.0000
271 Q B -2.1760
272 R B -2.1889
273 Y B -2.0456
274 K B -2.5180
275 V B 0.0000
276 G B 0.0000
277 R B -1.9899
278 I B -0.9683
279 A B 0.0000
280 L B -0.8094
281 E B -1.6830
282 A B 0.0000
283 G B -1.2358
284 V B 0.0000
285 I B 0.0000
286 P B -0.4748
287 A B 0.0000
288 G B -0.5148
289 D B -0.7802
290 M B 0.0000
291 T B 0.0000
292 K B -0.2532
293 E B 0.0000
294 A B 0.0000
295 T B 0.0000
296 I B 0.0000
297 T B 0.0000
298 K B 0.0000
299 L B 0.0000
300 M B 0.0000
301 W B 0.0000
302 I B 0.0000
303 L B 0.0000
304 G B -1.2453
305 H B -1.6392
306 T B -1.8058
307 K B -2.9481
308 N B -3.3610
309 I B -3.1494
310 E B -3.7122
311 E B -3.5495
312 V B 0.0000
313 K B -2.8777
314 Q B -2.8798
315 L B -1.7511
316 M B 0.0000
317 G B -1.6847
318 K B -2.2214
319 N B -1.9818
320 I B -0.4649
321 T B 0.0000
322 G B 0.0000
323 E B 0.0000
324 L B 0.0000
325 T B -1.1313
326 R B -1.4877
327 V B 0.7356
328 S B -0.4567
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Laboratory of Theory of Biopolymers 2018