| Chain sequence(s) |
A: EAMHSFCAFKAADDGPCRAAHPRWFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:39)
[INFO] Main: Simulation completed successfully. (00:00:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9359 | |
| 2 | A | A | -0.8942 | |
| 3 | M | A | -0.4992 | |
| 4 | H | A | -0.2582 | |
| 5 | S | A | 0.2180 | |
| 6 | F | A | 0.4795 | |
| 7 | C | A | 0.0000 | |
| 8 | A | A | 0.4469 | |
| 9 | F | A | 0.4735 | |
| 10 | K | A | -0.6107 | |
| 11 | A | A | -0.8451 | |
| 12 | A | A | -1.2105 | |
| 13 | D | A | -1.9276 | |
| 14 | D | A | -2.4160 | |
| 15 | G | A | -1.9347 | |
| 16 | P | A | -1.3897 | |
| 17 | C | A | -1.2316 | |
| 18 | R | A | -1.8079 | |
| 19 | A | A | -0.9082 | |
| 20 | A | A | -0.4040 | |
| 21 | H | A | -0.7467 | |
| 22 | P | A | -0.8590 | |
| 23 | R | A | -1.3977 | |
| 24 | W | A | -1.7911 | |
| 25 | F | A | 0.0000 | |
| 26 | F | A | 0.0000 | |
| 27 | N | A | -0.7067 | |
| 28 | I | A | 0.2874 | |
| 29 | F | A | 1.0973 | |
| 30 | T | A | -0.3393 | |
| 31 | R | A | -1.7234 | |
| 32 | Q | A | -2.1655 | |
| 33 | C | A | -2.1034 | |
| 34 | E | A | -1.8916 | |
| 35 | E | A | -2.0012 | |
| 36 | F | A | -0.6432 | |
| 37 | I | A | 0.2615 | |
| 38 | Y | A | 0.0000 | |
| 39 | G | A | 0.0000 | |
| 40 | G | A | -1.0422 | |
| 41 | C | A | -1.3169 | |
| 42 | E | A | -2.3764 | |
| 43 | G | A | -2.1960 | |
| 44 | N | A | 0.0000 | |
| 45 | Q | A | -1.3442 | |
| 46 | N | A | 0.0000 | |
| 47 | R | A | -1.6228 | |
| 48 | F | A | 0.0000 | |
| 49 | E | A | -2.6935 | |
| 50 | S | A | -2.3683 | |
| 51 | L | A | -2.2313 | |
| 52 | E | A | -3.2163 | |
| 53 | E | A | -3.1020 | |
| 54 | C | A | 0.0000 | |
| 55 | K | A | -3.4034 | |
| 56 | K | A | -3.3789 | |
| 57 | M | A | -1.8104 | |
| 58 | C | A | 0.0000 | |
| 59 | T | A | -2.6735 | |
| 60 | R | A | -2.7632 | |
| 61 | D | A | -2.6930 |