| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFRDIVVDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPLHPGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPDGRPLPDAPPPSPLYVRPPPTSPTAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAINVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9420 | |
| 2 | L | A | 1.9632 | |
| 3 | P | A | 0.8316 | |
| 4 | P | A | 0.3706 | |
| 5 | T | A | 0.1184 | |
| 6 | T | A | 0.1258 | |
| 7 | P | A | 0.1736 | |
| 8 | V | A | 1.2102 | |
| 9 | A | A | 0.0779 | |
| 10 | K | A | -1.0399 | |
| 11 | V | A | -0.1971 | |
| 12 | Q | A | -1.4413 | |
| 13 | S | A | -1.5763 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4424 | |
| 16 | E | A | -2.4530 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4567 | |
| 20 | P | A | 0.1262 | |
| 21 | T | A | 0.1602 | |
| 22 | S | A | -0.0966 | |
| 23 | L | A | 0.0892 | |
| 24 | F | A | -0.0347 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3114 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9199 | |
| 31 | R | A | -2.7023 | |
| 32 | L | A | -0.8123 | |
| 33 | L | A | 1.1580 | |
| 34 | T | A | 1.3728 | |
| 35 | V | A | 1.8303 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2500 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6804 | |
| 40 | R | A | -1.7741 | |
| 41 | D | A | -0.6356 | |
| 42 | I | A | 1.3384 | |
| 43 | V | A | 2.2585 | |
| 44 | V | A | 1.7096 | |
| 45 | D | A | -0.9033 | |
| 46 | G | A | -0.5096 | |
| 47 | K | A | -0.1227 | |
| 48 | V | A | 2.1361 | |
| 49 | V | A | 2.7516 | |
| 50 | V | A | 1.5786 | |
| 51 | P | A | 0.3811 | |
| 52 | K | A | -0.6918 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1218 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3791 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2318 | |
| 70 | K | A | -1.7821 | |
| 71 | F | A | -0.6300 | |
| 72 | A | A | -0.5761 | |
| 73 | L | A | -0.8649 | |
| 74 | P | A | -1.2068 | |
| 75 | Q | A | -2.5065 | |
| 76 | K | A | -3.1085 | |
| 77 | D | A | -2.9902 | |
| 78 | F | A | -1.6643 | |
| 79 | Y | A | -1.8851 | |
| 80 | D | A | -2.6877 | |
| 81 | P | A | -2.3051 | |
| 82 | E | A | -3.0517 | |
| 83 | K | A | -3.3918 | |
| 84 | E | A | -2.4567 | |
| 85 | R | A | -1.2928 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6689 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9709 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3873 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7019 | |
| 99 | G | A | -0.5199 | |
| 100 | P | A | -0.3562 | |
| 101 | L | A | 0.1424 | |
| 102 | G | A | -0.0973 | |
| 103 | K | A | -0.4419 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4008 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1458 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4228 | |
| 110 | L | A | 0.3209 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0626 | |
| 113 | K | A | -0.4225 | |
| 114 | L | A | -0.8929 | |
| 115 | G | A | -1.0375 | |
| 116 | D | A | -1.3655 | |
| 117 | T | A | -1.0275 | |
| 118 | E | A | -1.6951 | |
| 119 | N | A | -2.1616 | |
| 120 | P | A | -1.9349 | |
| 121 | T | A | -1.5999 | |
| 122 | E | A | -2.3786 | |
| 123 | P | A | -1.2824 | |
| 124 | L | A | -0.9670 | |
| 125 | H | A | -1.1966 | |
| 126 | P | A | -1.0970 | |
| 127 | G | A | -1.4609 | |
| 128 | A | A | -1.2499 | |
| 129 | D | A | -2.2179 | |
| 130 | D | A | -1.7458 | |
| 131 | R | A | -1.0812 | |
| 132 | V | A | 0.2554 | |
| 133 | A | A | 0.4537 | |
| 134 | F | A | 0.2858 | |
| 135 | S | A | -0.0721 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5726 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5676 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2017 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1131 | |
| 157 | D | A | 0.2856 | |
| 158 | I | A | 0.8213 | |
| 159 | A | A | 0.1076 | |
| 160 | E | A | -1.4836 | |
| 161 | P | A | -0.2339 | |
| 162 | C | A | 0.1832 | |
| 163 | P | A | -0.1696 | |
| 164 | G | A | -0.0764 | |
| 165 | L | A | 0.5956 | |
| 166 | P | A | -0.1072 | |
| 167 | P | A | -0.3354 | |
| 168 | G | A | -0.4222 | |
| 169 | A | A | -0.1346 | |
| 170 | C | A | 0.6311 | |
| 171 | P | A | 0.5524 | |
| 172 | P | A | 0.8459 | |
| 173 | I | A | 2.0468 | |
| 174 | Q | A | 0.8557 | |
| 175 | L | A | 1.4586 | |
| 176 | V | A | 0.8381 | |
| 177 | N | A | -0.3049 | |
| 178 | S | A | 0.0265 | |
| 179 | V | A | 0.4350 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3808 | |
| 182 | D | A | 0.0873 | |
| 183 | G | A | -0.1603 | |
| 184 | D | A | -0.5362 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1132 | |
| 190 | F | A | 0.0650 | |
| 191 | G | A | -0.1036 | |
| 192 | N | A | -0.2594 | |
| 193 | M | A | -0.1252 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3691 | |
| 197 | E | A | -2.6016 | |
| 198 | L | A | -1.2046 | |
| 199 | Q | A | -2.5195 | |
| 200 | Q | A | -3.2767 | |
| 201 | D | A | -3.5156 | |
| 202 | R | A | -3.3003 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1745 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3326 | |
| 211 | S | A | -1.8916 | |
| 212 | T | A | -1.4296 | |
| 213 | R | A | -2.0796 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1572 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3473 | |
| 220 | L | A | 0.6136 | |
| 221 | K | A | -1.0937 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8070 | |
| 224 | N | A | -1.4869 | |
| 225 | E | A | -1.2305 | |
| 226 | A | A | -0.6058 | |
| 227 | Y | A | -0.3614 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6563 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0832 | |
| 234 | F | A | 0.2646 | |
| 235 | G | A | -0.8104 | |
| 236 | R | A | -2.5845 | |
| 237 | R | A | -2.8325 | |
| 238 | E | A | -2.0749 | |
| 239 | Q | A | -0.1824 | |
| 240 | V | A | 1.4585 | |
| 241 | Y | A | 1.1782 | |
| 242 | A | A | 0.3311 | |
| 243 | R | A | -0.7089 | |
| 244 | H | A | -0.8090 | |
| 245 | F | A | 0.1238 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7043 | |
| 249 | C | A | -0.9875 | |
| 250 | G | A | -0.9595 | |
| 251 | P | A | -1.1354 | |
| 252 | D | A | -1.6920 | |
| 253 | G | A | -1.7241 | |
| 254 | R | A | -2.3127 | |
| 255 | P | A | -1.7557 | |
| 256 | L | A | -0.5108 | |
| 257 | P | A | -0.9677 | |
| 258 | D | A | -1.9433 | |
| 259 | A | A | -0.8810 | |
| 260 | P | A | -0.9642 | |
| 261 | P | A | -0.5774 | |
| 262 | P | A | -0.1738 | |
| 263 | S | A | -0.0205 | |
| 264 | P | A | 0.6904 | |
| 265 | L | A | 1.5096 | |
| 266 | Y | A | 1.1160 | |
| 267 | V | A | 1.0736 | |
| 268 | R | A | -1.1832 | |
| 269 | P | A | -0.5818 | |
| 270 | P | A | -0.7090 | |
| 271 | P | A | -0.5046 | |
| 272 | T | A | -0.1735 | |
| 273 | S | A | -0.1007 | |
| 274 | P | A | -0.4018 | |
| 275 | T | A | -0.2440 | |
| 276 | A | A | 0.0581 | |
| 277 | V | A | 1.0491 | |
| 278 | R | A | -0.1336 | |
| 279 | P | A | -0.5505 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.7412 | |
| 282 | D | A | -1.1763 | |
| 283 | Y | A | 0.7584 | |
| 284 | F | A | 0.6478 | |
| 285 | G | A | 0.3051 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9502 | |
| 291 | L | A | 1.6340 | |
| 292 | V | A | 0.6784 | |
| 293 | S | A | -0.1515 | |
| 294 | S | A | -0.9507 | |
| 295 | D | A | -1.8428 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1107 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6590 | |
| 301 | R | A | -1.8525 | |
| 302 | P | A | -0.9516 | |
| 303 | F | A | -0.1889 | |
| 304 | W | A | -0.5677 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0881 | |
| 307 | R | A | -2.8357 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2477 | |
| 310 | G | A | -1.2175 | |
| 311 | N | A | -1.2827 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8181 | |
| 319 | N | A | -0.9284 | |
| 320 | E | A | -1.0340 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.2710 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0066 | |
| 333 | N | A | 0.6000 | |
| 334 | F | A | 1.7822 | |
| 335 | T | A | 0.9394 | |
| 336 | I | A | 0.5254 | |
| 337 | S | A | -0.8473 | |
| 338 | Q | A | -1.6093 | |
| 339 | Q | A | -1.1338 | |
| 340 | L | A | 0.2871 | |
| 341 | C | A | 0.3694 | |
| 342 | T | A | 0.1391 | |
| 343 | P | A | -0.1790 | |
| 344 | A | A | 0.2875 | |
| 345 | I | A | 0.6646 | |
| 346 | N | A | 0.0207 | |
| 347 | V | A | 1.7508 | |
| 348 | Y | A | 1.5883 | |
| 349 | D | A | 0.0933 | |
| 350 | P | A | -0.3960 | |
| 351 | S | A | -0.3728 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7666 | |
| 354 | K | A | -1.7732 | |
| 355 | N | A | -1.5808 | |
| 356 | Y | A | 0.1667 | |
| 357 | L | A | 0.7640 | |
| 358 | R | A | 1.0055 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3900 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0875 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.1090 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.7026 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2708 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3061 | |
| 376 | L | A | -1.7002 | |
| 377 | D | A | -1.9682 | |
| 378 | P | A | -1.0257 | |
| 379 | G | A | -1.0056 | |
| 380 | V | A | -0.9263 | |
| 381 | L | A | -0.5224 | |
| 382 | A | A | -0.6507 | |
| 383 | H | A | -0.8112 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4109 | |
| 386 | T | A | -0.5550 | |
| 387 | M | A | -0.3019 | |
| 388 | N | A | -0.8630 | |
| 389 | P | A | -1.2429 | |
| 390 | T | A | -1.4444 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4412 | |
| 393 | E | A | -2.7761 | |
| 394 | N | A | -2.3841 | |
| 395 | W | A | -1.3754 | |
| 396 | N | A | -1.1279 | |
| 397 | L | A | -0.2067 | |
| 398 | G | A | 0.5095 | |
| 399 | F | A | 2.4109 | |
| 400 | V | A | 1.8242 | |
| 401 | P | A | 0.0485 | |
| 402 | P | A | -1.8544 | |
| 403 | K | A | -3.3225 | |
| 404 | E | A | -3.7842 | |
| 405 | R | A | -3.9285 | |
| 406 | E | A | -3.7922 | |
| 407 | D | A | -2.8562 | |
| 408 | P | A | -1.7587 | |
| 409 | Y | A | -0.9754 | |
| 410 | K | A | -2.1172 | |
| 411 | G | A | -0.6228 | |
| 412 | L | A | 0.6956 | |
| 413 | I | A | 1.6030 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3709 | |
| 416 | E | A | -1.6401 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9420 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0646 | |
| 421 | E | A | -2.8124 | |
| 422 | R | A | -2.6980 | |
| 423 | F | A | -1.3126 | |
| 424 | S | A | -1.4900 | |
| 425 | Q | A | -1.8677 | |
| 426 | D | A | -2.9068 | |
| 427 | L | A | -2.0045 | |
| 428 | D | A | -2.7843 | |
| 429 | Q | A | -2.6296 | |
| 430 | F | A | -1.4531 | |
| 431 | A | A | -0.9375 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.7065 | |
| 435 | K | A | -0.7795 | |
| 436 | F | A | 0.0978 | |
| 437 | L | A | 0.9851 | |
| 438 | Y | A | 0.7898 | |
| 439 | Q | A | -0.2973 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine