| Chain sequence(s) |
B: MIDVSKWSIQERQVKVYEIMRQVEENPHDPRLKGVSWYMLDRMMMYPEDPENIKRLEELVNG
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:26)
[INFO] Main: Simulation completed successfully. (00:01:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | 0.7074 | |
| 2 | I | B | 0.0840 | |
| 3 | D | B | -1.6619 | |
| 4 | V | B | 0.0000 | |
| 5 | S | B | -1.9092 | |
| 6 | K | B | -1.9735 | |
| 7 | W | B | -1.4398 | |
| 8 | S | B | -1.2199 | |
| 9 | I | B | -0.5309 | |
| 10 | Q | B | -1.4867 | |
| 11 | E | B | -1.7884 | |
| 12 | R | B | 0.0000 | |
| 13 | Q | B | -0.0084 | |
| 14 | V | B | 0.7264 | |
| 15 | K | B | -0.4895 | |
| 16 | V | B | 0.0000 | |
| 17 | Y | B | 0.6272 | |
| 18 | E | B | -0.9670 | |
| 19 | I | B | 0.0000 | |
| 20 | M | B | -1.0341 | |
| 21 | R | B | -2.7405 | |
| 22 | Q | B | -2.6415 | |
| 23 | V | B | -2.5662 | |
| 24 | E | B | -3.6781 | |
| 25 | E | B | -3.6475 | |
| 26 | N | B | -2.9461 | |
| 27 | P | B | -2.4938 | |
| 28 | H | B | -2.5593 | |
| 29 | D | B | -2.4461 | |
| 30 | P | B | -2.2617 | |
| 31 | R | B | -2.9878 | |
| 32 | L | B | -2.3122 | |
| 33 | K | B | -2.7298 | |
| 34 | G | B | -1.4982 | |
| 35 | V | B | -0.3983 | |
| 36 | S | B | 0.3995 | |
| 37 | W | B | 1.1702 | |
| 38 | Y | B | 1.2722 | |
| 39 | M | B | 0.4728 | |
| 40 | L | B | 0.0000 | |
| 41 | D | B | -0.1107 | |
| 42 | R | B | 0.0841 | |
| 43 | M | B | 0.0000 | |
| 44 | M | B | 0.5854 | |
| 45 | M | B | 0.8206 | |
| 46 | Y | B | 0.4932 | |
| 47 | P | B | 0.0000 | |
| 48 | E | B | -1.7576 | |
| 49 | D | B | -1.8425 | |
| 50 | P | B | -2.1761 | |
| 51 | E | B | -2.9725 | |
| 52 | N | B | 0.0000 | |
| 53 | I | B | -2.4941 | |
| 54 | K | B | -3.4782 | |
| 55 | R | B | -2.5749 | |
| 56 | L | B | 0.0000 | |
| 57 | E | B | -2.8050 | |
| 58 | E | B | -3.0473 | |
| 59 | L | B | 0.0000 | |
| 60 | V | B | -1.1237 | |
| 61 | N | B | -1.1945 | |
| 62 | G | B | -1.8340 |