| Chain sequence(s) |
A: PGVKPIRLFFGQQRRDVYPSALRRLLRFIAPDLVITHMEAHVNEATGRGKGCAWVIVPSVLEAKRLLRLSGRIFLDINSNGEEVYLFAPPNCREWLSEYADYVVSSTTRASHLPYLPMVVGVPKKECIYVRELLAPYIYDPNRGDCPPYADAVSEFKGLLEDHA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:56)
[INFO] Main: Simulation completed successfully. (00:03:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | -0.3020 | |
| 2 | G | A | -0.2440 | |
| 3 | V | A | 0.6224 | |
| 4 | K | A | -1.1195 | |
| 5 | P | A | -0.7294 | |
| 6 | I | A | 0.0000 | |
| 7 | R | A | -0.8424 | |
| 8 | L | A | 0.0000 | |
| 9 | F | A | 0.9076 | |
| 10 | F | A | 0.0000 | |
| 11 | G | A | 0.2304 | |
| 12 | Q | A | -0.0634 | |
| 13 | Q | A | -0.6733 | |
| 14 | R | A | -0.8747 | |
| 15 | R | A | -1.5535 | |
| 16 | D | A | -0.2443 | |
| 17 | V | A | 1.1089 | |
| 18 | Y | A | 1.4013 | |
| 19 | P | A | 0.0000 | |
| 20 | S | A | -0.1822 | |
| 21 | A | A | 0.0000 | |
| 22 | L | A | 0.0000 | |
| 23 | R | A | -1.6466 | |
| 24 | R | A | -1.0528 | |
| 25 | L | A | 0.0000 | |
| 26 | L | A | 0.0000 | |
| 27 | R | A | -1.3910 | |
| 28 | F | A | 0.8503 | |
| 29 | I | A | 0.7170 | |
| 30 | A | A | -0.3471 | |
| 31 | P | A | -0.9261 | |
| 32 | D | A | -1.4486 | |
| 33 | L | A | 0.0000 | |
| 34 | V | A | 1.3281 | |
| 35 | I | A | 0.5746 | |
| 36 | T | A | 0.1783 | |
| 37 | H | A | -1.0657 | |
| 38 | M | A | -1.1582 | |
| 39 | E | A | -1.4782 | |
| 40 | A | A | -0.6087 | |
| 41 | H | A | -1.1134 | |
| 42 | V | A | -1.1661 | |
| 43 | N | A | -1.8922 | |
| 44 | E | A | -2.4585 | |
| 45 | A | A | -1.2253 | |
| 46 | T | A | -1.2349 | |
| 47 | G | A | -1.5490 | |
| 48 | R | A | -1.9809 | |
| 49 | G | A | 0.0000 | |
| 50 | K | A | -2.4900 | |
| 51 | G | A | -1.4597 | |
| 52 | C | A | -0.6504 | |
| 53 | A | A | 0.0000 | |
| 54 | W | A | -0.4916 | |
| 55 | V | A | 0.0000 | |
| 56 | I | A | -0.1311 | |
| 57 | V | A | 0.0000 | |
| 58 | P | A | 0.3702 | |
| 59 | S | A | 0.7067 | |
| 60 | V | A | 0.8557 | |
| 61 | L | A | 1.5222 | |
| 62 | E | A | 0.6743 | |
| 63 | A | A | 0.0000 | |
| 64 | K | A | -0.1481 | |
| 65 | R | A | -0.7678 | |
| 66 | L | A | 0.0000 | |
| 67 | L | A | 0.0000 | |
| 68 | R | A | -1.6785 | |
| 69 | L | A | 0.0000 | |
| 70 | S | A | 0.0000 | |
| 71 | G | A | 0.0000 | |
| 72 | R | A | -0.5415 | |
| 73 | I | A | 0.0000 | |
| 74 | F | A | 0.0000 | |
| 75 | L | A | 0.0000 | |
| 76 | D | A | 0.0000 | |
| 77 | I | A | -0.3142 | |
| 78 | N | A | -1.3121 | |
| 79 | S | A | -1.0907 | |
| 80 | N | A | -1.7814 | |
| 81 | G | A | -1.3450 | |
| 82 | E | A | -1.3691 | |
| 83 | E | A | -0.6238 | |
| 84 | V | A | 0.0000 | |
| 85 | Y | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | F | A | 0.0685 | |
| 88 | A | A | 0.0000 | |
| 89 | P | A | -0.4579 | |
| 90 | P | A | -1.3718 | |
| 91 | N | A | -1.4514 | |
| 92 | C | A | 0.0000 | |
| 93 | R | A | -1.4088 | |
| 94 | E | A | -1.9444 | |
| 95 | W | A | -0.9358 | |
| 96 | L | A | 0.0000 | |
| 97 | S | A | -1.1041 | |
| 98 | E | A | -2.0036 | |
| 99 | Y | A | -0.6576 | |
| 100 | A | A | 0.0000 | |
| 101 | D | A | -1.2680 | |
| 102 | Y | A | 0.1363 | |
| 103 | V | A | 0.0000 | |
| 104 | V | A | 0.1517 | |
| 105 | S | A | -0.0909 | |
| 106 | S | A | -0.1745 | |
| 107 | T | A | 0.0771 | |
| 108 | T | A | -0.2193 | |
| 109 | R | A | -0.0059 | |
| 110 | A | A | -0.0348 | |
| 111 | S | A | -0.4001 | |
| 112 | H | A | -1.1237 | |
| 113 | L | A | 0.0000 | |
| 114 | P | A | 0.0000 | |
| 115 | Y | A | 1.1492 | |
| 116 | L | A | 0.8538 | |
| 117 | P | A | 0.0000 | |
| 118 | M | A | 0.0000 | |
| 119 | V | A | 1.3126 | |
| 120 | V | A | 0.0000 | |
| 121 | G | A | 0.3852 | |
| 122 | V | A | -0.3603 | |
| 123 | P | A | 0.0000 | |
| 124 | K | A | -2.2637 | |
| 125 | K | A | -2.2735 | |
| 126 | E | A | 0.0000 | |
| 127 | C | A | 0.3295 | |
| 128 | I | A | 1.5803 | |
| 129 | Y | A | 1.6593 | |
| 130 | V | A | 0.0000 | |
| 131 | R | A | -0.6610 | |
| 132 | E | A | -0.9348 | |
| 133 | L | A | 0.0491 | |
| 134 | L | A | 0.0000 | |
| 135 | A | A | -0.2844 | |
| 136 | P | A | -0.1334 | |
| 137 | Y | A | -0.0244 | |
| 138 | I | A | 0.6262 | |
| 139 | Y | A | -0.5140 | |
| 140 | D | A | -1.6360 | |
| 141 | P | A | -2.1577 | |
| 142 | N | A | -2.9413 | |
| 143 | R | A | -3.3119 | |
| 144 | G | A | -3.0092 | |
| 145 | D | A | -2.9524 | |
| 146 | C | A | -1.5291 | |
| 147 | P | A | -0.5809 | |
| 148 | P | A | -0.2042 | |
| 149 | Y | A | 0.5982 | |
| 150 | A | A | -0.1987 | |
| 151 | D | A | -1.2975 | |
| 152 | A | A | -0.6329 | |
| 153 | V | A | -0.3452 | |
| 154 | S | A | -0.8673 | |
| 155 | E | A | -1.5516 | |
| 156 | F | A | 0.0835 | |
| 157 | K | A | -1.3183 | |
| 158 | G | A | -0.4335 | |
| 159 | L | A | -0.1228 | |
| 160 | L | A | -1.2082 | |
| 161 | E | A | -2.4708 | |
| 162 | D | A | -2.9174 | |
| 163 | H | A | -2.3241 | |
| 164 | A | A | -1.2710 |