Project name: Esteban

Status: done

Started: 2026-03-19 14:20:22
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Chain sequence(s) A: PGVKPIRLFFGQQRRDVYPSALRRLLRFIAPDLVITHMEAHVNEATGRGKGCAWVIVPSVLEAKRLLRLSGRIFLDINSNGEEVYLFAPPNCREWLSEYADYVVSSTTRASHLPYLPMVVGVPKKECIYVRELLAPYIYDPNRGDCPPYADAVSEFKGLLEDHA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:56)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:58)
Show buried residues

Minimal score value
-3.3119
Maximal score value
1.6593
Average score
-0.5064
Total score value
-83.0426

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 P A -0.3020
2 G A -0.2440
3 V A 0.6224
4 K A -1.1195
5 P A -0.7294
6 I A 0.0000
7 R A -0.8424
8 L A 0.0000
9 F A 0.9076
10 F A 0.0000
11 G A 0.2304
12 Q A -0.0634
13 Q A -0.6733
14 R A -0.8747
15 R A -1.5535
16 D A -0.2443
17 V A 1.1089
18 Y A 1.4013
19 P A 0.0000
20 S A -0.1822
21 A A 0.0000
22 L A 0.0000
23 R A -1.6466
24 R A -1.0528
25 L A 0.0000
26 L A 0.0000
27 R A -1.3910
28 F A 0.8503
29 I A 0.7170
30 A A -0.3471
31 P A -0.9261
32 D A -1.4486
33 L A 0.0000
34 V A 1.3281
35 I A 0.5746
36 T A 0.1783
37 H A -1.0657
38 M A -1.1582
39 E A -1.4782
40 A A -0.6087
41 H A -1.1134
42 V A -1.1661
43 N A -1.8922
44 E A -2.4585
45 A A -1.2253
46 T A -1.2349
47 G A -1.5490
48 R A -1.9809
49 G A 0.0000
50 K A -2.4900
51 G A -1.4597
52 C A -0.6504
53 A A 0.0000
54 W A -0.4916
55 V A 0.0000
56 I A -0.1311
57 V A 0.0000
58 P A 0.3702
59 S A 0.7067
60 V A 0.8557
61 L A 1.5222
62 E A 0.6743
63 A A 0.0000
64 K A -0.1481
65 R A -0.7678
66 L A 0.0000
67 L A 0.0000
68 R A -1.6785
69 L A 0.0000
70 S A 0.0000
71 G A 0.0000
72 R A -0.5415
73 I A 0.0000
74 F A 0.0000
75 L A 0.0000
76 D A 0.0000
77 I A -0.3142
78 N A -1.3121
79 S A -1.0907
80 N A -1.7814
81 G A -1.3450
82 E A -1.3691
83 E A -0.6238
84 V A 0.0000
85 Y A 0.0000
86 L A 0.0000
87 F A 0.0685
88 A A 0.0000
89 P A -0.4579
90 P A -1.3718
91 N A -1.4514
92 C A 0.0000
93 R A -1.4088
94 E A -1.9444
95 W A -0.9358
96 L A 0.0000
97 S A -1.1041
98 E A -2.0036
99 Y A -0.6576
100 A A 0.0000
101 D A -1.2680
102 Y A 0.1363
103 V A 0.0000
104 V A 0.1517
105 S A -0.0909
106 S A -0.1745
107 T A 0.0771
108 T A -0.2193
109 R A -0.0059
110 A A -0.0348
111 S A -0.4001
112 H A -1.1237
113 L A 0.0000
114 P A 0.0000
115 Y A 1.1492
116 L A 0.8538
117 P A 0.0000
118 M A 0.0000
119 V A 1.3126
120 V A 0.0000
121 G A 0.3852
122 V A -0.3603
123 P A 0.0000
124 K A -2.2637
125 K A -2.2735
126 E A 0.0000
127 C A 0.3295
128 I A 1.5803
129 Y A 1.6593
130 V A 0.0000
131 R A -0.6610
132 E A -0.9348
133 L A 0.0491
134 L A 0.0000
135 A A -0.2844
136 P A -0.1334
137 Y A -0.0244
138 I A 0.6262
139 Y A -0.5140
140 D A -1.6360
141 P A -2.1577
142 N A -2.9413
143 R A -3.3119
144 G A -3.0092
145 D A -2.9524
146 C A -1.5291
147 P A -0.5809
148 P A -0.2042
149 Y A 0.5982
150 A A -0.1987
151 D A -1.2975
152 A A -0.6329
153 V A -0.3452
154 S A -0.8673
155 E A -1.5516
156 F A 0.0835
157 K A -1.3183
158 G A -0.4335
159 L A -0.1228
160 L A -1.2082
161 E A -2.4708
162 D A -2.9174
163 H A -2.3241
164 A A -1.2710
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Laboratory of Theory of Biopolymers 2018