| Chain sequence(s) |
A: QPQPQQTQRKMLLDVTTGQYYLVDTPVQPMTRRLFDPETGQYVDVPMTSQQQPVAPM
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:34)
[INFO] Main: Simulation completed successfully. (00:00:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1596 | Q | A | -1.6608 | |
| 1597 | P | A | -1.6518 | |
| 1598 | Q | A | -2.2344 | |
| 1599 | P | A | -1.9452 | |
| 1600 | Q | A | -2.4366 | |
| 1601 | Q | A | -2.6520 | |
| 1602 | T | A | -2.5022 | |
| 1603 | Q | A | -3.1183 | |
| 1604 | R | A | -3.0639 | |
| 1605 | K | A | -1.8631 | |
| 1606 | M | A | 1.2328 | |
| 1607 | L | A | 1.7872 | |
| 1608 | L | A | 2.1662 | |
| 1609 | D | A | 0.9340 | |
| 1610 | V | A | 1.6398 | |
| 1611 | T | A | 0.4510 | |
| 1612 | T | A | 0.0391 | |
| 1613 | G | A | 0.0173 | |
| 1614 | Q | A | -0.0586 | |
| 1615 | Y | A | 2.1528 | |
| 1616 | Y | A | 2.3262 | |
| 1617 | L | A | 2.0069 | |
| 1618 | V | A | 0.0356 | |
| 1619 | D | A | -2.1431 | |
| 1620 | T | A | -2.0680 | |
| 1621 | P | A | -1.6343 | |
| 1622 | V | A | -0.7686 | |
| 1623 | Q | A | -1.0097 | |
| 1624 | P | A | -0.2071 | |
| 1625 | M | A | 0.2696 | |
| 1626 | T | A | -1.0331 | |
| 1627 | R | A | -1.8392 | |
| 1628 | R | A | -2.0725 | |
| 1629 | L | A | 0.2023 | |
| 1630 | F | A | 1.1459 | |
| 1631 | D | A | -0.2964 | |
| 1632 | P | A | -1.0618 | |
| 1633 | E | A | -2.1899 | |
| 1634 | T | A | -1.2065 | |
| 1635 | G | A | -1.0103 | |
| 1636 | Q | A | -0.8581 | |
| 1637 | Y | A | 0.7271 | |
| 1638 | V | A | 0.2419 | |
| 1639 | D | A | -1.6287 | |
| 1640 | V | A | -0.5879 | |
| 1641 | P | A | -0.5592 | |
| 1642 | M | A | -0.2125 | |
| 1643 | T | A | -0.4569 | |
| 1644 | S | A | -1.1235 | |
| 1645 | Q | A | -2.2501 | |
| 1646 | Q | A | -2.2639 | |
| 1647 | Q | A | -1.7704 | |
| 1648 | P | A | -0.4810 | |
| 1649 | V | A | 1.2394 | |
| 1650 | A | A | 0.8541 | |
| 1651 | P | A | 0.6861 | |
| 1652 | M | A | 1.1671 |