| Chain sequence(s) |
A: LKHSISDYTEAEFLQLVTTIICNADTSSEEELVKLVTHFEEMTEHPSGSALIYYPKEGDDDSPSGIVNTVKQWRAANGKSGFKQ
B: KRNKPGKATGKGKPVGDKWLDDAGKDSGAPIPDRIADKLRDKEFKSFDDFRKAVWEEVSKDPELSKNLNPSNKSSVSKGYSPFTPKNQQVGGRKVYELHHDKPISQGGEVYDMDNIRVTTPKRHIDIHRG E: LKHSISDYTEAEFLQLVTTICNADTSSEEELVKLVTHFEEMTEHPSGSALIYYPKEGDDDSPSGIVNTVKQWRAANGKSGFKQ F: ESKRNKPGKATGKGKPVGDKWLDDAGKDSGAPIPDRIADKLRDKEFKSFDDFRRKAVWEEVSKDPELSKNLNPSNKSSVSKGYSPFTPKNQQVGGRKVYELHHDKPISQGGEVYDMDNIRVTTPKRHIDIHRG input PDB |
| Selected Chain(s) | A,B,E,F |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:16:42)
[INFO] Main: Simulation completed successfully. (00:16:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | L | A | 0.2626 | |
| 4 | K | A | -1.7160 | |
| 5 | H | A | -1.7915 | |
| 6 | S | A | -1.5968 | |
| 7 | I | A | 0.0000 | |
| 8 | S | A | -1.3585 | |
| 9 | D | A | -1.4784 | |
| 10 | Y | A | -1.4498 | |
| 11 | T | A | -1.8698 | |
| 12 | E | A | -2.3125 | |
| 13 | A | A | -1.4595 | |
| 14 | E | A | -2.0904 | |
| 15 | F | A | 0.0000 | |
| 16 | L | A | -1.0158 | |
| 17 | Q | A | -1.5671 | |
| 18 | L | A | -0.6825 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -1.0265 | |
| 21 | T | A | -1.1712 | |
| 22 | I | A | 0.0000 | |
| 23 | C | A | 0.0000 | |
| 24 | N | A | -1.9316 | |
| 25 | A | A | 0.0000 | |
| 26 | D | A | -2.5339 | |
| 27 | T | A | -1.9110 | |
| 28 | S | A | -1.3785 | |
| 29 | S | A | -1.7083 | |
| 30 | E | A | -2.1399 | |
| 31 | E | A | -3.0754 | |
| 32 | E | A | -3.1365 | |
| 33 | L | A | 0.0000 | |
| 34 | V | A | -1.8849 | |
| 35 | K | A | -2.5499 | |
| 36 | L | A | -1.3324 | |
| 37 | V | A | 0.0000 | |
| 38 | T | A | -1.1910 | |
| 39 | H | A | -1.4952 | |
| 40 | F | A | 0.0000 | |
| 41 | E | A | -1.7605 | |
| 42 | E | A | -2.6968 | |
| 43 | M | A | 0.0000 | |
| 44 | T | A | 0.0000 | |
| 45 | E | A | -2.6858 | |
| 46 | H | A | -1.5235 | |
| 47 | P | A | -0.9518 | |
| 48 | S | A | 0.0000 | |
| 49 | G | A | -1.3044 | |
| 50 | S | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | L | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | Y | A | 0.0000 | |
| 55 | Y | A | -0.5975 | |
| 56 | P | A | -1.8915 | |
| 57 | K | A | -3.1757 | |
| 58 | E | A | -3.3143 | |
| 59 | G | A | -2.6904 | |
| 60 | D | A | -3.1724 | |
| 61 | D | A | -3.1723 | |
| 62 | D | A | -1.9417 | |
| 63 | S | A | -1.1348 | |
| 64 | P | A | -0.8687 | |
| 65 | S | A | -0.8657 | |
| 66 | G | A | 0.0000 | |
| 67 | I | A | 0.0000 | |
| 68 | V | A | 0.0000 | |
| 69 | N | A | -2.2462 | |
| 70 | T | A | -1.6869 | |
| 71 | V | A | 0.0000 | |
| 72 | K | A | -2.2994 | |
| 73 | Q | A | -2.0492 | |
| 74 | W | A | -1.4592 | |
| 75 | R | A | 0.0000 | |
| 76 | A | A | -1.2687 | |
| 77 | A | A | -0.9546 | |
| 78 | N | A | -1.3383 | |
| 79 | G | A | -1.2683 | |
| 80 | K | A | -1.7706 | |
| 81 | S | A | -1.2122 | |
| 82 | G | A | -1.5960 | |
| 83 | F | A | -1.4684 | |
| 84 | K | A | -2.1328 | |
| 85 | Q | A | -1.9458 | |
| 4 | K | B | -3.4605 | |
| 5 | R | B | -3.7286 | |
| 6 | N | B | -4.0477 | |
| 7 | K | B | -3.7259 | |
| 8 | P | B | -3.3035 | |
| 9 | G | B | -3.4533 | |
| 10 | K | B | -4.0498 | |
| 11 | A | B | 0.0000 | |
| 12 | T | B | -2.7640 | |
| 13 | G | B | -2.4351 | |
| 14 | K | B | -3.3131 | |
| 15 | G | B | -2.8491 | |
| 16 | K | B | -2.5736 | |
| 17 | P | B | -1.3493 | |
| 18 | V | B | -1.4973 | |
| 19 | G | B | -2.0494 | |
| 20 | D | B | -3.8820 | |
| 21 | K | B | -3.7165 | |
| 22 | W | B | 0.0000 | |
| 23 | L | B | -2.3445 | |
| 24 | D | B | -3.6743 | |
| 25 | D | B | -3.8858 | |
| 26 | A | B | 0.0000 | |
| 27 | G | B | -2.6207 | |
| 28 | K | B | -3.6481 | |
| 29 | D | B | -3.0156 | |
| 30 | S | B | -1.9459 | |
| 31 | G | B | -2.1874 | |
| 32 | A | B | 0.0000 | |
| 33 | P | B | -1.3553 | |
| 34 | I | B | 0.0000 | |
| 35 | P | B | 0.0000 | |
| 36 | D | B | -2.6766 | |
| 37 | R | B | -2.4888 | |
| 38 | I | B | 0.0000 | |
| 39 | A | B | 0.0000 | |
| 40 | D | B | -3.7039 | |
| 41 | K | B | -3.4440 | |
| 42 | L | B | 0.0000 | |
| 43 | R | B | -3.9428 | |
| 44 | D | B | -4.3205 | |
| 45 | K | B | -4.1993 | |
| 46 | E | B | -4.3407 | |
| 47 | F | B | 0.0000 | |
| 48 | K | B | -3.8167 | |
| 49 | S | B | -3.7040 | |
| 50 | F | B | 0.0000 | |
| 51 | D | B | -3.4018 | |
| 52 | D | B | -3.2405 | |
| 53 | F | B | 0.0000 | |
| 54 | R | B | -2.1521 | |
| 55 | K | B | -2.7077 | |
| 56 | A | B | 0.0000 | |
| 57 | V | B | 0.0000 | |
| 58 | W | B | 0.0000 | |
| 59 | E | B | -2.2825 | |
| 60 | E | B | -1.9862 | |
| 61 | V | B | 0.0000 | |
| 62 | S | B | -2.1595 | |
| 63 | K | B | -2.6475 | |
| 64 | D | B | 0.0000 | |
| 65 | P | B | -2.1271 | |
| 66 | E | B | -3.1489 | |
| 67 | L | B | 0.0000 | |
| 68 | S | B | 0.0000 | |
| 69 | K | B | -3.2763 | |
| 70 | N | B | -2.8279 | |
| 71 | L | B | 0.0000 | |
| 72 | N | B | -0.9666 | |
| 73 | P | B | -1.0906 | |
| 74 | S | B | 0.0000 | |
| 75 | N | B | 0.0000 | |
| 76 | K | B | -1.8814 | |
| 77 | S | B | -1.3505 | |
| 78 | S | B | 0.0000 | |
| 79 | V | B | 0.0000 | |
| 80 | S | B | -1.7093 | |
| 81 | K | B | -1.8729 | |
| 82 | G | B | 0.0000 | |
| 83 | Y | B | 0.0000 | |
| 84 | S | B | 0.0000 | |
| 85 | P | B | 0.0000 | |
| 86 | F | B | 0.0000 | |
| 87 | T | B | 0.0000 | |
| 88 | P | B | -1.3283 | |
| 89 | K | B | -2.0089 | |
| 90 | N | B | -2.1327 | |
| 91 | Q | B | -1.7308 | |
| 92 | Q | B | -1.5597 | |
| 93 | V | B | -0.7424 | |
| 94 | G | B | -0.8057 | |
| 95 | G | B | -1.4508 | |
| 96 | R | B | -1.3713 | |
| 97 | K | B | 0.0000 | |
| 98 | V | B | 0.0000 | |
| 99 | Y | B | 0.0000 | |
| 100 | E | B | -0.6512 | |
| 101 | L | B | 0.0000 | |
| 102 | H | B | 0.0000 | |
| 103 | H | B | 0.0000 | |
| 104 | D | B | -2.4196 | |
| 105 | K | B | -3.0556 | |
| 106 | P | B | -2.0100 | |
| 107 | I | B | -1.7923 | |
| 108 | S | B | -1.4104 | |
| 109 | Q | B | -1.9945 | |
| 110 | G | B | -1.9081 | |
| 111 | G | B | 0.0000 | |
| 112 | E | B | -2.9367 | |
| 113 | V | B | 0.0000 | |
| 114 | Y | B | 0.0000 | |
| 115 | D | B | -2.0578 | |
| 116 | M | B | 0.0000 | |
| 117 | D | B | -3.1655 | |
| 118 | N | B | -2.2794 | |
| 119 | I | B | 0.0000 | |
| 120 | R | B | -1.1533 | |
| 121 | V | B | 0.0000 | |
| 122 | T | B | 0.0000 | |
| 123 | T | B | 0.0000 | |
| 124 | P | B | 0.0000 | |
| 125 | K | B | -1.5320 | |
| 126 | R | B | -1.9066 | |
| 127 | H | B | -1.4209 | |
| 128 | I | B | -0.9387 | |
| 129 | D | B | -1.8922 | |
| 130 | I | B | -1.6925 | |
| 131 | H | B | -1.9031 | |
| 132 | R | B | -2.5431 | |
| 133 | G | B | -1.5700 | |
| 3 | L | E | 0.1772 | |
| 4 | K | E | -1.5926 | |
| 5 | H | E | -1.8253 | |
| 6 | S | E | -1.2859 | |
| 7 | I | E | 0.0000 | |
| 8 | S | E | -1.1741 | |
| 9 | D | E | -1.1507 | |
| 10 | Y | E | -1.1030 | |
| 11 | T | E | -1.1928 | |
| 12 | E | E | -1.7076 | |
| 13 | A | E | -0.8661 | |
| 14 | E | E | -1.1216 | |
| 15 | F | E | 0.0000 | |
| 16 | L | E | -0.7713 | |
| 17 | Q | E | -1.3680 | |
| 18 | L | E | 0.0000 | |
| 19 | V | E | 0.0000 | |
| 20 | T | E | -1.0259 | |
| 21 | T | E | -1.2114 | |
| 22 | I | E | 0.0000 | |
| 23 | C | E | 0.0000 | |
| 24 | N | E | -1.9195 | |
| 25 | A | E | 0.0000 | |
| 26 | D | E | -2.4653 | |
| 27 | T | E | -1.7389 | |
| 28 | S | E | -1.2279 | |
| 29 | S | E | -1.5216 | |
| 30 | E | E | -2.0966 | |
| 31 | E | E | -3.0096 | |
| 32 | E | E | -2.6597 | |
| 33 | L | E | 0.0000 | |
| 34 | V | E | 0.0000 | |
| 35 | K | E | -2.6224 | |
| 36 | L | E | -1.2042 | |
| 37 | V | E | 0.0000 | |
| 38 | T | E | -1.4825 | |
| 39 | H | E | -1.5608 | |
| 40 | F | E | 0.0000 | |
| 41 | E | E | -1.8911 | |
| 42 | E | E | -2.6793 | |
| 43 | M | E | 0.0000 | |
| 44 | T | E | 0.0000 | |
| 45 | E | E | -2.6347 | |
| 46 | H | E | -1.4963 | |
| 47 | P | E | -0.9126 | |
| 48 | S | E | -0.9512 | |
| 49 | G | E | 0.0000 | |
| 50 | S | E | 0.0000 | |
| 51 | A | E | -0.6268 | |
| 52 | L | E | 0.0000 | |
| 53 | I | E | 0.0000 | |
| 54 | Y | E | 0.0000 | |
| 55 | Y | E | -0.5269 | |
| 56 | P | E | -1.9727 | |
| 57 | K | E | -3.2348 | |
| 58 | E | E | -3.4067 | |
| 59 | G | E | -2.7896 | |
| 60 | D | E | -3.3033 | |
| 61 | D | E | -3.3047 | |
| 62 | D | E | -1.9566 | |
| 63 | S | E | -1.1625 | |
| 64 | P | E | -0.9121 | |
| 65 | S | E | -0.9361 | |
| 66 | G | E | 0.0000 | |
| 67 | I | E | 0.0000 | |
| 68 | V | E | 0.0000 | |
| 69 | N | E | -2.4171 | |
| 70 | T | E | -1.9019 | |
| 71 | V | E | 0.0000 | |
| 72 | K | E | -2.5190 | |
| 73 | Q | E | -2.2787 | |
| 74 | W | E | -1.5573 | |
| 75 | R | E | 0.0000 | |
| 76 | A | E | -1.2858 | |
| 77 | A | E | -0.9384 | |
| 78 | N | E | -1.2510 | |
| 79 | G | E | -1.1745 | |
| 80 | K | E | -1.7838 | |
| 81 | S | E | -1.1649 | |
| 82 | G | E | -1.5804 | |
| 83 | F | E | -1.3376 | |
| 84 | K | E | -1.7793 | |
| 85 | Q | E | -1.7657 | |
| 2 | E | F | -2.9302 | |
| 3 | S | F | -3.2039 | |
| 4 | K | F | -4.0082 | |
| 5 | R | F | -4.6350 | |
| 6 | N | F | -4.5962 | |
| 7 | K | F | -4.1924 | |
| 8 | P | F | -3.3854 | |
| 9 | G | F | -3.1995 | |
| 10 | K | F | -4.0156 | |
| 11 | A | F | 0.0000 | |
| 12 | T | F | -2.6203 | |
| 13 | G | F | -2.2476 | |
| 14 | K | F | -3.2567 | |
| 15 | G | F | 0.0000 | |
| 16 | K | F | -2.7032 | |
| 17 | P | F | -1.5473 | |
| 18 | V | F | -1.5470 | |
| 19 | G | F | -2.3167 | |
| 20 | D | F | -3.8163 | |
| 21 | K | F | -3.5547 | |
| 22 | W | F | 0.0000 | |
| 23 | L | F | -2.1092 | |
| 24 | D | F | -3.2676 | |
| 25 | D | F | -2.9828 | |
| 26 | A | F | 0.0000 | |
| 27 | G | F | -2.3818 | |
| 28 | K | F | -3.4583 | |
| 29 | D | F | -2.9431 | |
| 30 | S | F | -1.9838 | |
| 31 | G | F | -1.9357 | |
| 32 | A | F | 0.0000 | |
| 33 | P | F | -1.1632 | |
| 34 | I | F | 0.0000 | |
| 35 | P | F | 0.0000 | |
| 36 | D | F | -3.0584 | |
| 37 | R | F | -2.7004 | |
| 38 | I | F | 0.0000 | |
| 39 | A | F | 0.0000 | |
| 40 | D | F | -3.6824 | |
| 41 | K | F | -3.2301 | |
| 42 | L | F | 0.0000 | |
| 43 | R | F | -3.7946 | |
| 44 | D | F | -4.2649 | |
| 45 | K | F | -4.1339 | |
| 46 | E | F | -4.3210 | |
| 47 | F | F | 0.0000 | |
| 48 | K | F | -3.6845 | |
| 49 | S | F | -3.7989 | |
| 50 | F | F | 0.0000 | |
| 51 | D | F | -2.7766 | |
| 52 | D | F | -2.8169 | |
| 53 | F | F | 0.0000 | |
| 54 | R | F | -2.3289 | |
| 55 | K | F | -2.9274 | |
| 56 | A | F | -2.1614 | |
| 57 | V | F | 0.0000 | |
| 58 | W | F | 0.0000 | |
| 59 | E | F | -2.4129 | |
| 60 | E | F | -2.0089 | |
| 61 | V | F | 0.0000 | |
| 62 | S | F | -2.1577 | |
| 63 | K | F | -2.5084 | |
| 64 | D | F | -2.1276 | |
| 65 | P | F | -2.1505 | |
| 66 | E | F | -2.9383 | |
| 67 | L | F | 0.0000 | |
| 68 | S | F | 0.0000 | |
| 69 | K | F | -3.1097 | |
| 70 | N | F | -2.9983 | |
| 71 | L | F | 0.0000 | |
| 72 | N | F | -1.0058 | |
| 73 | P | F | -1.1534 | |
| 74 | S | F | 0.0000 | |
| 75 | N | F | 0.0000 | |
| 76 | K | F | -1.9346 | |
| 77 | S | F | -1.3733 | |
| 78 | S | F | 0.0000 | |
| 79 | V | F | 0.0000 | |
| 80 | S | F | -1.7436 | |
| 81 | K | F | -1.9815 | |
| 82 | G | F | 0.0000 | |
| 83 | Y | F | -1.3248 | |
| 84 | S | F | 0.0000 | |
| 85 | P | F | 0.0000 | |
| 86 | F | F | 0.0000 | |
| 87 | T | F | 0.0000 | |
| 88 | P | F | -1.1344 | |
| 89 | K | F | -1.6343 | |
| 90 | N | F | -2.0120 | |
| 91 | Q | F | -1.7340 | |
| 92 | Q | F | 0.0000 | |
| 93 | V | F | -0.5998 | |
| 94 | G | F | -0.8246 | |
| 95 | G | F | -1.5341 | |
| 96 | R | F | -1.7579 | |
| 97 | K | F | 0.0000 | |
| 98 | V | F | -0.4891 | |
| 99 | Y | F | 0.0000 | |
| 100 | E | F | -0.6214 | |
| 101 | L | F | -0.5069 | |
| 102 | H | F | 0.0000 | |
| 103 | H | F | -1.7729 | |
| 104 | D | F | -2.6579 | |
| 105 | K | F | -2.8030 | |
| 106 | P | F | -1.9298 | |
| 107 | I | F | -2.0854 | |
| 108 | S | F | -1.6722 | |
| 109 | Q | F | -1.9530 | |
| 110 | G | F | -1.6955 | |
| 111 | G | F | 0.0000 | |
| 112 | E | F | -2.7391 | |
| 113 | V | F | 0.0000 | |
| 114 | Y | F | 0.0000 | |
| 115 | D | F | -1.8550 | |
| 116 | M | F | 0.0000 | |
| 117 | D | F | -2.4510 | |
| 118 | N | F | -2.0516 | |
| 119 | I | F | 0.0000 | |
| 120 | R | F | -0.9615 | |
| 121 | V | F | 0.0000 | |
| 122 | T | F | 0.0000 | |
| 123 | T | F | 0.0000 | |
| 124 | P | F | 0.0000 | |
| 125 | K | F | -1.9890 | |
| 126 | R | F | -2.2276 | |
| 127 | H | F | -1.5340 | |
| 128 | I | F | -0.9543 | |
| 129 | D | F | -2.6013 | |
| 130 | I | F | -2.0783 | |
| 131 | H | F | -1.9699 | |
| 132 | R | F | -2.6771 | |
| 133 | G | F | -1.8283 |